Peer Review History
| Original SubmissionMay 19, 2025 |
|---|
|
Dear Dr. Mohammed, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ============================== Please respond fully to each of the reviewers comments in your rebuttal, including the detailed comments of reviewer 1 and the more general comments of reviewer 2, including clarifying the aim of the manuscript and issues around missing data. ============================== Please submit your revised manuscript by Nov 17 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Sebastian Suarez Fuller, PhD Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Thank you for stating the following financial disclosure: The first pilot was funded internally by Public Health England’s Innovation Fund. Public Health England is the predecessor of the UK Health Security (UKHSA). The first author and many coauthors are employees of UKHSA, the national health protection agency for England. Please state what role the funders took in the study. If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." If this statement is not correct you must amend it as needed. Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf. 3. Thank you for stating the following in the Competing Interests/Financial Disclosure section: AN was a member of the Steering Group for the pilots of the enhanced GUMCAD specification while he was an employee of Public Health England (PHE; the predecessor to the UK Health Security Agency [UKHSA]); he is now an employee of EpiConcept, a privately funded company. JW conducted analyses of the data collected from the pilots (the results of which are presented in the Appendix) while he was an employee of PHE; he is now an employee of Parexel International Limited, a privately funded clinical research organisation. None of the other coauthors reported any conflicts of interest. We note that one or more of the authors are employed by a commercial company: EpiConcept and Parexel International Limited a. Please provide an amended Funding Statement declaring this commercial affiliation, as well as a statement regarding the Role of Funders in your study. If the funding organization did not play a role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript and only provided financial support in the form of authors' salaries and/or research materials, please review your statements relating to the author contributions, and ensure you have specifically and accurately indicated the role(s) that these authors had in your study. You can update author roles in the Author Contributions section of the online submission form. Please also include the following statement within your amended Funding Statement. “The funder provided support in the form of salaries for authors [insert relevant initials], but did not have any additional role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript. The specific roles of these authors are articulated in the ‘author contributions’ section.” If your commercial affiliation did play a role in your study, please state and explain this role within your updated Funding Statement. b. Please also provide an updated Competing Interests Statement declaring this commercial affiliation along with any other relevant declarations relating to employment, consultancy, patents, products in development, or marketed products, etc. Within your Competing Interests Statement, please confirm that this commercial affiliation does not alter your adherence to all PLOS ONE policies on sharing data and materials by including the following statement: "This does not alter our adherence to PLOS ONE policies on sharing data and materials.” (as detailed online in our guide for authors http://journals.plos.org/plosone/s/competing-interests) . If this adherence statement is not accurate and there are restrictions on sharing of data and/or materials, please state these. Please note that we cannot proceed with consideration of your article until this information has been declared. Please include both an updated Funding Statement and Competing Interests Statement in your cover letter. We will change the online submission form on your behalf. 4. We noted in your submission details that a portion of your manuscript may have been presented or published elsewhere. Please clarify whether this conference proceeding was peer-reviewed and formally published. If this work was previously peer-reviewed and published, in the cover letter please provide the reason that this work does not constitute dual publication and should be included in the current manuscript. 5. We note that you have included the phrase “data not shown” in your manuscript. Unfortunately, this does not meet our data sharing requirements. PLOS does not permit references to inaccessible data. We require that authors provide all relevant data within the paper, Supporting Information files, or in an acceptable, public repository. Please add a citation to support this phrase or upload the data that corresponds with these findings to a stable repository (such as Figshare or Dryad) and provide and URLs, DOIs, or accession numbers that may be used to access these data. Or, if the data are not a core part of the research being presented in your study, we ask that you remove the phrase that refers to these data. 6. Please remove all personal information, ensure that the data shared are in accordance with participant consent, and re-upload a fully anonymized data set. Note: spreadsheet columns with personal information must be removed and not hidden as all hidden columns will appear in the published file. Additional guidance on preparing raw data for publication can be found in our Data Policy (https://journals.plos.org/plosone/s/data-availability#loc-human-research-participant-data-and-other-sensitive-data) and in the following article: http://www.bmj.com/content/340/bmj.c181.long . 7. If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. Additional Editor Comments: Please respond to each of the reviewers comments in your rebuttal. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? Reviewer #1: Yes Reviewer #2: No ********** 2. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: N/A Reviewer #2: N/A ********** 3. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: No Reviewer #2: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: This is an important manuscript describing how one of the world’s most advanced STI surveillance systems has been further enhanced. It is a well-written paper that merits timely publication. I have no major concerns, only a few minor issues and clarifications to suggest. OVERALL In the results you highlight: "[In 2023,] transgender women, transgender men, and gender diverse (identifying as non-binary or in any other way) people each made up less than 1% of people accessing SHS in England". Given the comprehensiveness and reach of the GUMCAD tool, and considering the scarcity of representative estimates for trans and gender-diverse populations, this paper — and the journal's readership — would benefit from more prominent presentation of the following prevalence figures for SHS attendees: transgender women, 0.4%; transgender men, 0.5%; and gender-diverse individuals, 0.5%. ABSTRACT - Unless incidence estimates have been published elsewhere, and given the absence of clear evidence for increases in HSV or HPV, I suggest rephrasing to: “...an increasing trend in diagnosed bacterial sexually transmitted infections.” - Even within the abstract, it would be more accessible to spell out GUMCAD in full upon first mention. INTRODUCTION - The opening paragraph comes across as somewhat dramatic. A large proportion of diagnosed bacterial STIs affect the rectum or oropharynx and often resolve spontaneously without leading to the sequelae described. Consider toning this down slightly. - P3L63: The second part of this sentence — suggesting a greater proportional rise among heterosexuals than MSM — is potentially misleading. For example, a rise from 1 to 2 cases among heterosexuals (100% increase) is proportionally greater than a rise from 5,000 to 6,000 among homosexual men (20%). Unless underpinned with absolute numbers, I suggest deleting the second half of the sentence. - P4L83: Reference 10 (Stutterheim et al.) reports on HIV prevalence, not "poorer sexual health." Among trans masculine individuals, the increased HIV risk appears primarily linked to behaviour — particularly sex with other men — rather than gender identity per se. I recommend rephrasing: “Given evidence for higher HIV prevalence among transgender men and particularly transgender women, when compared to the general population (10),...” METHODS - P4L90: The sentence is quite long. Consider placing the legal clause (“under Regulation 4 of The Health Service – Control of Patient Information”) in parentheses or splitting it into a new sentence for readability. - P4L93: The term “Caldicott Advisory Panel” may be unfamiliar to international readers. I suggest adding a brief explanation such as: “...the UK's Caldicott Advisory Panel (named after Dame Fiona Caldicott).” - P5L106: The term “lower super output area” misses a word and should be capitalised and spelled out as: “Lower Layer Super Output Area (LSOA)”, which is likely more recognisable internationally. - P7L167: It would be more accurate to refer to “NHS England’s Data Coordination Board (DCB)” or, if discussing 2023 specifically, “formerly NHS Digital’s DCB”, as NHS Digital was dissolved and merged into NHS England in 2023. Consider clarifying this transition. Also, “NHS England Digital” may not be meaningful to non-UK audiences — best to avoid or explain. RESULTS - P8L203 and P10L260: Replace hyphens with en dashes (–) where ranges are indicated (e.g. “57–71%”). - P10L238: Add “in” before “96%”: “…gender identity was reported in 96% of records...” - P10L259f: The current wording is ambiguous. It could be read as implying that people with only one recent sexual partner had more STIs than those with multiple partners. If I understand correctly, partner number data were available for only 28% of cases in 2023. Suggested rephrasing: “In absolute numbers, heterosexual or bisexual women accounted for far more screens and attendances than heterosexual men. Where data on recent partner numbers were available, these women and men typically reported only one sexual partner in the past three months. In contrast, among GBMSM — who more frequently reported multiple partners — most screens and attendances involved men with 2–4 or 5+ recent partners.” - P11L271 and Fig. 1A: The current labelling mixes sexual identity and behaviour. Labelling only MSM by sexual identity while other groups remain behaviourally defined is inconsistent and could be read as stigmatising. A more consistent terminology might be: -HMSW (heterosexual and other men who have sex exclusively with women) -HBWSM (heterosexual, bisexual, and other women who have sex with men) -GBMSM (gay, bisexual, and other men who have sex with men) -LWSW (lesbian and other women who have sex exclusively with women) In any case, where “MSW” is defined, clarify that it refers to “men who have sex exclusively with women.” Since you mention that “women” in the figure include trans women, please also note the implications: for example, trans women with a penis having sex with each other are categorised as WSW. While this classification may be politically correct, it has implications for epidemiological reporting, particularly if the proportion of trans women increases in the future. - P11L279: Replace the hyphen with an em dash (—). DISCUSSION - P12L310: Add “diagnosed” before “bacterial” to reflect the fact that most countries (unlike the UK) lack comprehensive population-level testing data. - P13L324: See previous point. GBMSM includes gay, bisexual, and other men who have sex with men, many of whom may not identify as gay or bisexual. You could rephrase as: “MSM were more likely to report multiple sexual partners than MSW, WSM, or WSW,” or: “Gay and bisexual men were more likely to report multiple sexual partners than heterosexual men and women or lesbian women.” - P13L328: Please add “from three anatomical sites” after “...recommended to test for STIs quarterly”, to clarify the testing intensity involved, which impacts diagnosis rates. - P14L357: It is reassuring to read that the primary aim of using doxyPEP as a public health intervention is targeted at syphilis. Thank you for this. Reviewer #2: This paper represents important work in enhancing the surveillance system. The aim of the paper is somewhat unclear, however. There is some description of the consultation process to inform the enhancement work, though the detail of this is difficult to follow at time (important detail is left in supporting information). The GUMCAD data presented is limited in terms of responding to the main issues raised in the introduction. Further, the large proportion of missing behavioural data (i.e., gaps in number of recent sex partners) does not seem to support the statements about more robust behavioural data in the discussion. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: Yes: Dr A Jeremias Schmidt Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step. |
| Revision 1 |
|
Enhancing surveillance of sexually transmitted infections in England with gender identity and behavioural data: the GUMCAD STI Surveillance System PONE-D-25-23813R1 Dear Dr. Mohammed, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support . If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Sebastian Suarez Fuller, PhD Academic Editor PLOS One |
| Formally Accepted |
|
PONE-D-25-23813R1 PLOS One Dear Dr. Mohammed, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS One. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Sebastian Suarez Fuller Academic Editor PLOS One |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .