Peer Review History
| Original SubmissionAugust 11, 2025 |
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Dear Dr. Kreiter, Please submit your revised manuscript by Nov 02 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Karlo Toljan Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1.Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please note that funding information should not appear in any section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript. 3. When completing the data availability statement of the submission form, you indicated that you will make your data available on acceptance. We strongly recommend all authors decide on a data sharing plan before acceptance, as the process can be lengthy and hold up publication timelines. Please note that, though access restrictions are acceptable now, your entire data will need to be made freely accessible if your manuscript is accepted for publication. This policy applies to all data except where public deposition would breach compliance with the protocol approved by your research ethics board. If you are unable to adhere to our open data policy, please kindly revise your statement to explain your reasoning and we will seek the editor's input on an exemption. Please be assured that, once you have provided your new statement, the assessment of your exemption will not hold up the peer review process. 4. Thank you for stating the following in the Competing Interests section: “I have read the journal's policy and the authors of this manuscript have the following competing interests: Niels Franken has nothing to disclose. Daniel Kreiter, Demmie Bouweriks, Stephanie Knippenberg, Oliver Gerlach, Raymond Hupperts received institutional research grants and a grant from Nationaal MS fonds not related to this research; RH received fees for lectures and advisory boards from Biogen, Merck and Genzyme-Sanofi.” We note that you received funding from a commercial source: Nationaal MS fonds Please provide an amended Competing Interests Statement that explicitly states this commercial funder, along with any other relevant declarations relating to employment, consultancy, patents, products in development, marketed products, etc. Within this Competing Interests Statement, please confirm that this does not alter your adherence to all PLOS ONE policies on sharing data and materials by including the following statement: "This does not alter our adherence to PLOS ONE policies on sharing data and materials.” (as detailed online in our guide for authors http://journals.plos.org/plosone/s/competing-interests). If there are restrictions on sharing of data and/or materials, please state these. Please note that we cannot proceed with consideration of your article until this information has been declared. Please include your amended Competing Interests Statement within your cover letter. We will change the online submission form on your behalf. 5. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information . 6. If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. Additional Editor Comments: [Note: HTML markup is below. Please do not edit.] Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? Reviewer #1: Yes Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: In the manuscript "Spinal cord lesions in relapsing-remitting multiple sclerosis: prognostic value of intrathecal production of immunoglobulins", Kreiter et al, aimed to evaluate the prognostic value of CSF biomarkers predicting new spinal cord lesions on follow up imaging in MS. This is an important and interesting topic which requires exploration. Although this study has several limitations (notably the retrospective nature of the study) the results are valuable to scientific community to prompt further evaluation once the following recommendations to improve the quality of the manuscript are addressed as listed below: Major: - Methods: Please provide further explanation why progressive MS patients were excluded. - Methods: Please include MRI protocols including sequences obtained, magnet strength, etc. - Methods: Please include normal cut-off values for CSF IgM and IgG indices. - Methods: I don't believe impact of DMT is adequately addressed in the current study. Evaluating the first DMT used (vs. highest efficacy DMT used) would make more sense for the current study. Further, would it be possible to compare impact of DMT efficacy using propensity score matching? - Methods: Would it be possible to provide data on lesion volumes in addition to lesion counts? - Methods: It remains unclear exactly how recurrent events were analyzed in this model. Were adjustments such Andersen–Gill model used or some other methods? Were there any violations in the assumptions of the CPH model? - Discussion: Impact of DMT on IgG and IgM index warrants further discussion. Could this impact the prognostic value of these biomarkers if they are considered dynamic and DMT dependent? Minor: - Abstract: remove “more” in the line “… identify patients prone to more future …” - Abstract: prefer inclusion of number included participants and baseline demographics if possible within word/character count limits Reviewer #2: In this study, the authors investigated the association between intrathecal IgM production and both cross-sectional and longitudinal changes in spinal cord lesions in patients with relapsing-onset multiple sclerosis (MS). They report that patients with intrathecal IgG and IgM production had more spinal cord lesions compared to those without. However, in a subgroup of 66 patients with longitudinal spinal cord MRI follow-up (118 scans, median follow-up ~2 years), no association was found between intrathecal IgM and the development of new spinal cord lesions. While the study addresses a relevant question, several concerns remain: • In the longitudinal evaluation, it is important to specify which spinal cord regions were covered by MRI. Was there variability in spinal cord coverage across patients? • The potential use of heterogeneous spinal cord MRI protocols across follow-up scans might be a relevant confounding factor. • As acknowledged by the authors, disease-modifying therapies (DMTs) represent a potential confounder that is not sufficiently addressed in the analyses. • The retrospective derivation of spinal cord lesion burden from radiology reports is a major limitation. In how many cases were MRI images re-evaluated by the authors? • Given the distribution of lesion count, multivariate linear regression may not be the most appropriate modeling approach. • Cox proportional hazards models estimate hazard ratios, not risk ratios as stated in the manuscript, and this terminology should be corrected. • The statement “66 patients had a total of 118 follow-up spinal cord MRIs” corresponds to fewer than two MRIs per patient on average, which seems low and requires clarification. • While a relatively large number of participants contributed to the cross-sectional analysis, a major limitation of the study is the substantial drop-out in the longitudinal analyses. Minor: • In the abstract, correct “IgF” to “IgG.” • The abstract should indicate the total number of patients included, as well as details on follow-up duration. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Dear Dr. Kreiter, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Dec 19 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Karlo Toljan Academic Editor PLOS ONE Journal Requirements: If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author Reviewer #1: All comments have been addressed Reviewer #2: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions??> Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #2: No ********** 4. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: Thank you for addressing the comments. A few additional minor suggestions outlined below. I would suggest removing the following sentence: “With respect to the spinal cord, there is no conclusive evidence of a difference in lesion detection between 1.5T and 3T MRI systems.” Please present number of scans at each magnetic field instead. Please see manuscript: "Impact of 3 Tesla MRI on interobserver agreement in clinically isolated syndrome: A MAGNIMS multicentre study." Please add a sentence in the methods to specify that patients were DMT-naïve at the time of CSF testing. Table 1: There is mention of IgM twice. The first should be IgG. Reviewer #2: • It seems that the authors did not address the point: “As acknowledged by the authors, disease-modifying therapies (DMTs) represent a potential confounder that is not sufficiently addressed in the analyses.” • In response to the comment “Given the distribution of lesion count, multivariate linear regression may not be the most appropriate modeling approach,” the authors state that “As lesion count is the dependent variable of the model here, the distribution of this variable is not of relevance to the assumptions of the regression model.” This statement appears inaccurate, as the distribution of the dependent variable is crucial for ensuring that model assumptions are met. Depending on its distribution, a count regression model (e.g. Poisson or negative binomial) may be more appropriate. • According to the authors’ response, the point “While a relatively large number of participants contributed to the cross-sectional analysis, a major limitation of the study is the substantial drop-out in the longitudinal analyses” also seems not to have been addressed. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] To ensure your figures meet our technical requirements, please review our figure guidelines: https://journals.plos.org/plosone/s/figures You may also use PLOS’s free figure tool, NAAS, to help you prepare publication quality figures: https://journals.plos.org/plosone/s/figures#loc-tools-for-figure-preparation. NAAS will assess whether your figures meet our technical requirements by comparing each figure against our figure specifications. |
| Revision 2 |
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Spinal cord lesions in relapsing-remitting multiple sclerosis: prognostic value of intrathecal production of immunoglobulins PONE-D-25-41819R2 Dear Dr. Kreiter, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support . If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Karlo Toljan Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-25-41819R2 PLOS ONE Dear Dr. Kreiter, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Karlo Toljan Academic Editor PLOS ONE |
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