Peer Review History
| Original SubmissionMarch 27, 2025 |
|---|
|
Dear Dr. Nanjoh, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ============================== ACADEMIC EDITOR: Please submit your revised manuscript by Aug 04 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Emmanuel O Adewuyi, BPharm, MPH, PhD Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. When completing the data availability statement of the submission form, you indicated that you will make your data available on acceptance. We strongly recommend all authors decide on a data sharing plan before acceptance, as the process can be lengthy and hold up publication timelines. Please note that, though access restrictions are acceptable now, your entire data will need to be made freely accessible if your manuscript is accepted for publication. This policy applies to all data except where public deposition would breach compliance with the protocol approved by your research ethics board. If you are unable to adhere to our open data policy, please kindly revise your statement to explain your reasoning and we will seek the editor's input on an exemption. Please be assured that, once you have provided your new statement, the assessment of your exemption will not hold up the peer review process. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? Reviewer #1: Yes Reviewer #2: No Reviewer #3: Yes Reviewer #4: Yes Reviewer #5: Yes Reviewer #6: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #2: No Reviewer #3: Yes Reviewer #4: Yes Reviewer #5: Yes Reviewer #6: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: No Reviewer #3: Yes Reviewer #4: No Reviewer #5: Yes Reviewer #6: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: No Reviewer #2: Yes Reviewer #3: Yes Reviewer #4: Yes Reviewer #5: Yes Reviewer #6: Yes ********** Reviewer #1: Dear Authors, here are the comments: 1. Line 100 – Make it study design and period 2. Line 123 – “… selected using a sampling constant of six”, how was this interval calculated. 3. How did you use systematic sampling? What was the sampling frame? 4. Please revise the result and discussion part. Reviewer #2: The manuscript presents a technically sound cross-sectional study on GORD prevalence and risk factors in the OR Tambo district. The use of the validated GerdQ tool for diagnosis and systematic sampling are strengths. However, several issues affect the robustness of conclusions: Sampling Bias: Over 90% of participants were from one sub-district (King Sabata Dalindyebo), with Port St Johns unrepresented. This limits spatial generalizability and may skew risk factor associations. Uncontrolled Confounders: The omission of anti-hypertensive medication use (noted in limitations) is critical, as these drugs (e.g., beta-blockers, calcium channel blockers, and ACE inhibitors) may independently influence GORD. This undermines the reported hypertension-GORD association (OR=3.5). Risk Factor Analysis: The binary logistic regression model includes Coffee consumption despite non-significance (p=0.097) and an implausibly wide CI (OR=9.2; CI:0.7–127.9), suggesting model overfitting or sparse data. Re-evaluation with stricter variable selection is needed. Symptom Interpretation: While heartburn was most prevalent (50.5%), mild symptoms dominated. The claim that GORD has "little effect on daily life" requires nuance, as subclinical reflux may still impact long-term complications (e.g., Barrett’s esophagus). Conclusions are partially supported but overgeneralized. The high prevalence (32.3% vs. global 14–18%) is attributed to local risk factors, yet sampling bias and unmeasured confounders (e.g., H. pylori status, medication use) weaken causal inferences. Statistical Rigor Sample Size: Adequately calculated (n=406) for prevalence estimation but underpowered for subgroup analyses (e.g., dietary factors with small "no" groups, like fruit non-consumers: n=23). Model Issues: Hosmer-Lemeshow Test: Absent in results; essential for logistic regression validity. Overfitting: Table 5 includes alcohol despite non-significance. A reduced model excluding non-significant variables is warranted. Data Sparsity: Zero-cell counts (e.g., "swimming 30+ min/week": no GORD cases) may distort ORs. Sensitivity analyses (e.g., Firth correction) should be considered. Inconsistencies: Table 2 reports 45.9% GORD with family history (p=0.004), but this factor is excluded from the final regression model without justification. Recommendations: Address sampling bias by acknowledging reduced generalizability. Re-run regression excluding non-significant variables and report model diagnostics. Report effect sizes (e.g., Cramer’s V) for demographic trends. Address data sparsity and consider exact logistic regression where applicable. Recommendations for Revision: Add Data Availability Statement. Correct tables/typos and clarify demographic trend interpretations. Discuss H. pylori’s protective role in context of South Africa’s high infection rates. Reviewer #3: Summary: This paper provides insights into the prevalence and risk factors of gastro-oesophageal reflux disease (GORD) in a rural South African population, an area with limited prior research. The findings are significant, particularly the high prevalence of GORD and its associations with hypertension, dietary habits, and lifestyle factors. However, the study has notable gaps and methodological limitations that need to be addressed before publication. Comments: Inclusion and Exclusion Criteria: • The inclusion criteria specify adults aged 18 years and above, of both genders, seeking medical attention at the outpatient department of Mthatha Regional Hospital. However, the exclusion criteria mention individuals with selected comorbidities and pregnant women, but these comorbidities are not clearly defined. • Suggestion: It would be helpful to clarify which comorbidities were excluded from the study to avoid ambiguity and ensure that readers understand the specific population being studied. Address Missing Confounding Factors: • The study should explore additional confounding variables that might influence the relationship between hypertension and GORD. For example, the impact of anti-hypertensive drugs, which could affect the lower oesophageal sphincter function, should be considered. It is also important to explore the influence of other medications or comorbid health conditions that could interact with GORD symptoms. • Suggestion: A more thorough exploration of these confounding factors would strengthen the paper's scientific rigor. Final Note: This study is a valuable contribution to understanding GORD in rural South Africa. However, addressing the above points will enhance the paper’s scientific rigor, generalizability, and impact. Conditional acceptance with revisions is recommended to improve the clarity, methodological transparency, and applicability of the findings to a broader population. Reviewer #4: Research Article Peer Review Your research titled “Prevalence of gastro-oesophageal reflux disease and its associate risk factors among the adult population of OR Tambo district, South Africa” was reviewed and the following comments were made for your consideration. Corresponding authorship discrepancies • Mirabel Kah-Keh Nanjoh was indicated as the corresponding author in the form but the asterisk symbol was rather attached to Nomonde Ndyalvan in sentence 5. Could you please clarify? • Sentence 18, please rectify the initials in the parenthesis, it should rather be “(N.N)”. Title • Please, “associate” should rather be “associated”. • Please, “gastro-oesophageal” should rathe be “gastroesophageal”. Abstract Sentence 32, percentages of heartburn, sleep disturbance and regurgitation should not be reported in parenthesis to ensure consistency with similar results reported in the abstract. Introduction Even though the author indicated previous studies showcasing GORD prevalence globally and Africa, for instance, sentence 69, the author cited previous studies reporting GORD rates in west Africa. Nonetheless, the author could have included more similar work in African setting with country specific findings. Materials and methods • Sentence 123, sampling section. Could the author please clarify how he had the sampling interval of 6 for the systematic sampling? • Sentence 133, “questionnaire which included validated questionnaires” could the author clarify this statement. Please how were the questionnaires validated? which statistical tool was used to check the questionnaire reliability? • Sentence 139, “including comorbidities, WAS also collected” it should rather be “WERE”. Also, the author should please elaborate examples of comorbidities included in the study. • Sentence 155, the author never site or state the standardized tools he used to collect data concerning physical activities, smoking, and exercise, could the author please elaborate? Data Analysis • Sentence 164, “Binary logistic regression's 95% confidence intervals and adjusted odd ratios were presented”. But I could not see any information concerning adjusted odds ratio in the results section of the binary logistic regression. Please elaborate. • Sentence 165, “The Hosmer-Lemeshow test was used to assess the logistic regression model's goodness of fitness”. Please what was the score of the test? Please this can be reported as a footnote of the logistic regression table. Results • Please all tables’ headings are not complete and should be reviewed. For instance, “Table 1: Demographic factors associated with GORD”, Should rather be “Table 1: Demographic factors associated with GORD among adult population of OR Tambo district, South Africa”. Please note that, the target audience and study area should be included in the title of the tables. Please review and apply it throughout the protocol. • Sentence 234, table 5. The author did not report on adjusted odds ratio. This means that, co-founders were not adjusted for in the model. Could the author please clarify? • Sentence 234, table 5. Reference groups for the variables were not included in the table. For instance, hypertension (yes/no), which one is the reference group for the hypertension variable? Please review the table to include suggestions. • Sentence 234, table 5, the table only included significant predictors, this makes the model highly problematic since co founders and non-significant predictors were not included and adjusted for in the model. Please review to include demographics, age sex among others. References • Please spaces between individual references are wider. Please reformat the reference list to reduce the spaces. General comments • To prevent unbiased sampling procedure, the author should have given equal chance for all health facilities in the district to have been selected for the study, instead, the author purposely selected a single health facility. This method is biased and may affect the study findings to be regarded as the true reflection of the study population. Multi stage probability sampling should have been employed in this study to reduce sampling bias. • Response to data availability unclear. Could the author please clarify?. Reviewer #5: The Manuscript fits into the scope and its recommended for publication. It is technically sound based on the methodology with data which reflects on the study . Data presented are appropriately based on fact. Reviewer #6: I find your manuscript to be well-organized, clearly written, and methodologically sound. You have provided a coherent and logical rationale for all major components of the study, including the research objectives, study design, data collection methods, and analytical approaches. This thoughtful justification strengthens the internal consistency of the manuscript and enhances its scientific credibility. The study addresses a relevant topic, and the findings are well presented. The discussion appropriately contextualizes the results within the existing body of literature, and the limitations are reasonably acknowledged. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No Reviewer #2: No Reviewer #3: No Reviewer #4: Yes: Hardi Adam Reviewer #5: Yes: Ebenezer Ad Adams Reviewer #6: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step. |
| Revision 1 |
|
Dear Dr. Nanjoh, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ============================== ACADEMIC EDITOR: Minor revision has been recommended by reviewers. Author need to pay close attention to the required corrections, including those from the reviewer recommending acceptance. This revision also provides authors the opportunity to thoroughly proofread their work, and fact-check every statement so there is no delay moving from this point. ============================== Please submit your revised manuscript by Nov 13 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Emmanuel O Adewuyi, BPharm, MPH, PhD Academic Editor PLOS ONE Journal Requirements: If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author Reviewer #1: (No Response) Reviewer #3: All comments have been addressed Reviewer #4: All comments have been addressed Reviewer #6: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions??> Reviewer #1: Yes Reviewer #3: Yes Reviewer #4: Yes Reviewer #6: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #3: Yes Reviewer #4: Yes Reviewer #6: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #3: Yes Reviewer #4: Yes Reviewer #6: No ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: No Reviewer #3: Yes Reviewer #4: Yes Reviewer #6: Yes ********** Reviewer #1: Dear Authors, All the comments have not been addressed. Here are the comments that need to be addressed: 1. Line 123 – “… selected using a sampling constant of six”, how was this interval calculated. 2. How did you use systematic sampling? What was the sampling frame? 3. Please revise the result and discussion part. Reviewer #3: My earlier concerns regarding unclear inclusion and exclusion criteria, the absence of clarity around comorbidities, and the need to better acknowledge potential confounding factors have been adequately addressed in the revised manuscript. The authors have clarified the study population, defined comorbidities, acknowledged the limitations around unmeasured variables such as anti-hypertensive drug use, and re-analyzed the data to focus appropriately on Mthatha. These revisions have improved the methodological transparency and strengthened the manuscript. Reviewer #4: I am satisfied with the revisions made by the authors. The data underlying the findings have been made fully available, and the manuscript is clearly presented in standard English. The work is technically sound, with the data appropriately supporting the conclusions. Furthermore, the statistical analyses have been conducted rigorously and appropriately. I therefore find the manuscript suitable for acceptance. Reviewer #6: The manuscript in its current form is suitable for publication as all comments have been addressed. However, please replace the symbol ‘@’ in the Table 3 with a clearer notation such as ‘N\C’ (Not Computed). For clarity, you may also include a footnote below the table, for example: Note: N\C = Not Computed. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No Reviewer #3: No Reviewer #4: Yes: Hardi Adam Reviewer #6: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org |
| Revision 2 |
|
Prevalence of gastroesophageal reflux disease and its associated risk factors among the adult population of Mthatha, Eastern Cape, South Africa PONE-D-25-16621R2 Dear Dr. Nanjoh, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support . If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Emmanuel O Adewuyi, BPharm, MPH, PhD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
|
PONE-D-25-16621R2 PLOS ONE Dear Dr. Nanjoh, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Emmanuel O Adewuyi Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .