Peer Review History
| Original SubmissionNovember 9, 2024 |
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Dear Dr. Khanam, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. The paper has been reviewed by two reviewers, and both have shown serious concerns regarding the methodology. The authors are encouraged to address the comments and resubmit the manuscript. Please submit your revised manuscript by Jan 12 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Noman Naseer, PhD Academic Editor PLOS ONE Journal Requirements: 1. When submitting your revision, we need you to address these additional requirements. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please note that PLOS ONE has specific guidelines on code sharing for submissions in which author-generated code underpins the findings in the manuscript. In these cases, we expect all author-generated code to be made available without restrictions upon publication of the work. Please review our guidelines at https://journals.plos.org/plosone/s/materials-and-software-sharing#loc-sharing-code and ensure that your code is shared in a way that follows best practice and facilitates reproducibility and reuse. 3. In the online submission form, you indicated that your data is available only on request from a third party. Please note that your Data Availability Statement is currently missing the contact details for the third party, such as an email address or a link to where data requests can be made. Please update your statement with the missing information. 4. PLOS requires an ORCID iD for the corresponding author in Editorial Manager on papers submitted after December 6th, 2016. Please ensure that you have an ORCID iD and that it is validated in Editorial Manager. To do this, go to ‘Update my Information’ (in the upper left-hand corner of the main menu), and click on the Fetch/Validate link next to the ORCID field. This will take you to the ORCID site and allow you to create a new iD or authenticate a pre-existing iD in Editorial Manager. Additional Editor Comments: The paper has been reviewed by two reviewers, and both have shown serious concerns regarding the methodology. The authors are encouraged to address the comments and resubmit the manuscript. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? Reviewer #1: Partly Reviewer #2: No ********** 2. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: No Reviewer #2: No ********** 3. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: No ********** Reviewer #1: The manuscript proposed an AI-based channel selection algorithms that are both fast and accurate for identifying EEG-based motor imagery (MI) movements. A novel hybrid method combining statistical tests with Bonferroni correction is introduced to achieve an effective channel reduction rate for selecting MI task-related EEG channels and an automatic deep learning-based framework for MI task classification. The paper is well written and structured, however it needs improvement. Following are the suggestions to improve the quality of paper: 1. Font size and style is different at some places. It should be same in the text, paragraph, figure and tables. Follow the journal template and guidelines. 2. Authors have mentioned that proposed algorithm is tested and validated for two EEG datasets of 5 and 7 participants, respectively. However, still the sample of overall 12 participant is too small to conclude results and claims. There are open access datasets of EEG available on the internet with adequate sample size and number of participants. The proposed algorithm should be tested and validated on larger datasets to strengthen the claims and contributions of the study. 3. In the Table 2: 5 fold average performance results for the proposed DLRCSPNN based model, there are multiple accuracies for participants showing 100% results; this may be due to over-fitting of the classifier. This need to be verified for the results of DLRCSPRNN results as well. 4. Student’s t-test and Bonferroni correction is applied to select the channels. Is there any significance statistical analysis applied on the results; accuracies? 5. In Table 4. Architectural comparison of the different models are discussed, however the hardware details are not described on which both the algorithms are computed. Reviewer #2: This paper, in its current form, lacks the essential elements of a well-structured and scientifically rigorous study, making it difficult to consider it a strong contribution to the field. Significant issues across multiple sections need to be addressed: 1. Introduction and Literature Review: The introduction section is missing a detailed literature review, particularly for the classification methods discussed. A comprehensive background and context are essential to highlight the novelty and relevance of the study. 2. Figure Quality: o Figure 1: The image is blurry and appears AI-generated. Its quality needs significant improvement to enhance clarity and readability. o Figures 2 and 3: These figures are also blurry and lack detailed representation. They need to be redrawn with higher resolution and properly annotated details. 3. Dataset Details: o Clarify the distinction between Dataset 1 (imaginary motor tasks involving the right hand and foot) and Dataset 2 (motor acquisition). o Provide justification for why two participants performed left-hand and foot activities, while others focused on the right-hand tasks. o Discuss the implications of such variations in task allocation on the results. 4. Methodological Concerns: o Line 151: The sentence mentioning "might lose important information in discarded channels" raises concerns. Results should be compared with all channels to confirm whether the channel selection method inadvertently excludes useful information. o Line 198: Correct the typo where "=1=1" is mentioned. o Details on the DLRCSP algorithm are missing. Explain how the algorithm is designed and applied in the study. 5. Neural Network Representation: o Figure 3: The representation is unclear. It suggests input data is fed to all three dense layers separately, which is logically inconsistent. Recheck the flow of information within the network layers and clarify the purpose of lines joining the blocks. 6. Experimental Setup and Results: o Line 238: Merely training the model on k−1k-1k−1 subsets (with only 42 samples) is insufficient. Justify how the training data is adequate for robust model performance. o When comparing the proposed model with RNN algorithms, ensure the number of neurons and sequence of layers are consistent. Differences in network architecture can significantly impact results and invalidate comparisons. o Results are only compared with a single RNN algorithm (LSTM). Provide a rationale for choosing RNN and LSTM and explain why comparisons with other architectures (e.g., GRU) are omitted. 7. Subject-Specific Analysis: o Figure 7: Results for subject "ay" are missing when using RNN. Ensure all subjects are included in the analysis for consistency. o Comparisons between datasets (motor imagery vs. motor acquisition) are problematic as the datasets inherently differ in nature, which could skew results. 8. Comparison and Benchmarking: o Comparative results are not adequately presented in tables or bar charts. Include comparisons with benchmark algorithms or methodologies to demonstrate the performance of the proposed approach. o Ensure all bar charts include comparative results for clarity. 9. Discussion Section: o The discussion section does not adequately support the results or compare them with findings from previous studies. Expand this section to include critical analysis and comparisons with related works. 10. Methodology and Results Flow: • Experimental setups mentioned in the results section should be moved to the methodology section for better structure and flow. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Dear Dr. Khanam, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ACADEMIC EDITOR: Some minor revisions are still required. Please submit your revised manuscript by Jul 28 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Noman Naseer, PhD Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Additional Editor Comments: Still some revision are required. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author Reviewer #1: (No Response) Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions??> Reviewer #1: Yes Reviewer #2: Partly ********** 3. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: No ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: The authors have improved the manuscript significantly, however following concerns still need to be addressed. 1. Font Size and style: This still need to addressed, it is recommended to review the complete thoroughly and use same font style in text, tables and figures. It is evident that font style of references is different from other text in the manuscript. Table 5 has multiple font styles. 2. Figure size and aspect ratio: the figure font style and size should be same as text, also keep aspect ratio of figure readable. Moreover, figure 1 text (flowchart) is not readable. 3. Results of Wilcoxon signed-rank test should be included in the manuscript as separate heading “statistical significance” Reviewer #2: Channel Selection: The proposed channel reduction method is novel but lacks comparison with existing channel selection techniques. The paper does not specify which or how many channels were selected from each dataset. Suggestion: Include comparative results with standard methods and clearly state selected channels per dataset. Dataset Details: It’s unclear if all three datasets are binary classification problems. Suggestion: Clarify class details for each dataset. Figure 10 Clarity: The combined plot is unclear. Suggestion: Plot DLRCSPNN and DLRCSPRNN results separately for better clarity. Efficiency Claims (Line 550): Efficiency isn’t quantified in results. Suggestion: Add computational time comparison with baseline NN and RNN (without DLRCSP). Expand Figure 11 accordingly. Unsupported Claim (Line 642): No comparative accuracy results are shown for existing channel selection methods. Suggestion: Remove or support the claim with data. Discussion – Lower Accuracy (Figures 12–16): Other studies show higher ACC and RC. Suggestion: Discuss possible reasons for lower performance of the proposed method. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: Yes: Syed Hammad Nazeer Gilani Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org |
| Revision 2 |
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Dear Dr. Khanam, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ============================== ACADEMIC EDITOR: Please submit your revised manuscript by Sep 27 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Noman Naseer, PhD Academic Editor PLOS ONE Journal Requirements: If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Additional Editor Comments: Some very minor revisions are still required [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author Reviewer #1: (No Response) Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions??> Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: Following are the comments to improve the manuscript 1. Again the Figure-1 needs improvement. The fonts in the figure are not readable and images are blur. If the idea is to present the methodology/approach, then simple block diagram may work better here, however every step should include the text representation of methods. 2. Same as highlighted previous, the aspect ratio and size of the all the figures are different. Make sure to use same fonts, size and style in all figures. 3. Thoroughly review and correct the references as per author’s guidelines. For example reference number 44-47 are incomplete. Reviewer #2: Thank you for your submission of the revised manuscript and for providing detailed responses to the comments, as well as clarifications on the queries raised. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: Yes: Syed Hammad Nazeer Gilani Reviewer #2: Yes: Jamila Akhter ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org |
| Revision 3 |
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A novel channel reduction concept to enhance the classification of motor imagery tasks in brain-computer interface systems PONE-D-24-50501R3 Dear Dr. Khanam, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support . If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Noman Naseer, PhD Academic Editor PLOS ONE Additional Editor Comments (optional): The reviewers' comments have been adequetly addressed. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions??> Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes ********** Reviewer #1: (No Response) ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: Yes: Syed Hammad Nazeer Gilani ********** |
| Formally Accepted |
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PONE-D-24-50501R3 PLOS ONE Dear Dr. Khanam, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Noman Naseer Academic Editor PLOS ONE |
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