Peer Review History
| Original SubmissionAugust 7, 2025 |
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Please submit your revised manuscript by Oct 19 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
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Kind regards, Krishna Moorthi Bhat, M.D., Ph.D. Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. We noted in your submission details that a portion of your manuscript may have been presented or published elsewhere. As mentioned in our cover letter, this manuscript was part of my Doctoral Thesis and is available at the Ludwig Maximilian University of Munich (LMU) library and per extension the publication repository of the Max Planck Society (PuRe). Please clarify whether this [conference proceeding or publication] was peer-reviewed and formally published. If this work was previously peer-reviewed and published, in the cover letter please provide the reason that this work does not constitute dual publication and should be included in the current manuscript. 3. When completing the data availability statement of the submission form, you indicated that you will make your data available on acceptance. We strongly recommend all authors decide on a data sharing plan before acceptance, as the process can be lengthy and hold up publication timelines. Please note that, though access restrictions are acceptable now, your entire data will need to be made freely accessible if your manuscript is accepted for publication. This policy applies to all data except where public deposition would breach compliance with the protocol approved by your research ethics board. If you are unable to adhere to our open data policy, please kindly revise your statement to explain your reasoning and we will seek the editor's input on an exemption. Please be assured that, once you have provided your new statement, the assessment of your exemption will not hold up the peer review process. 4. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match. When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section. 5. Thank you for stating the following financial disclosure: This work was funded by the Max Planck Society. Please state what role the funders took in the study. If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." If this statement is not correct you must amend it as needed. Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf. 6. Thank you for stating the following in the Acknowledgments Section of your manuscript: We are grateful to the Princeton FlyWire team and members of the Murthy and Seung labs for development and maintenance of FlyWire (supported by BRAIN Initiative grant MH117815 to Murthy and Seung). This work was funded by the Max Planck Society. We note that you have provided funding information that is not currently declared in your Funding Statement. However, funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows: This work was funded by the Max Planck Society. Please include your amended statements within your cover letter; we will change the online submission form on your behalf. 7. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. 8. If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. Additional Editor Comments : Reviewer #1: This manuscript addresses an important and understudied aspect of the Drosophila connectome - the role of polyadic synapses in shaping wiring architectures in the OFF-motion pathway, specifically in T5a neurons. The authors use FlyWire reconstructions to categorize polyadic synapse types and analyze their spatial distribution, introducing the concept of “co-T5s” as part of a directional wiring motif. This is potentially impactful, especially since polyadic synapses dominate the fly optic lobe but remain poorly understood. The manuscript is ambitious, bringing together connectomic analysis, structural categorization, and functional interpretation. However, while the findings are intriguing, the paper could be significantly strengthened by improvements in clarity, quantification, figure presentation, and the depth of discussion. Below, I outline major and minor comments. Major Comments 1. The categorization of eight polyadic synapse types (a, ab, ac, etc.) is descriptive but risks appearing arbitrary unless functionally or structurally validated. The authors need to strengthen the justification for why this classification is meaningful beyond taxonomy. For example, do different types show systematic differences in abundance, PSD size, presynaptic bouton morphology, or co-T5 spatial distribution? 2. Figure 1 is strong overall, but the classification of polyadic types (a, ab, abc, abcd) needs clearer labeling of T5 subtypes and more consistent color coding to improve accessibility for readers outside the field. 3. Figure 2. While distributions and abundances are reported, the manuscript sometimes presents qualitative descriptions without statistical backing. Please provide statistical comparisons across polyadic types, beyond abundance counts. Are differences in spatial distribution significant across Tm vs. CT1 inputs? Include sample sizes, error bars, and test statistics. Also, the distance seems to be higher for a compared to abcd (Fig.B vs Fig.I), but according to Figure A, a is nearer than abcd. 4. The discussion presents intriguing hypotheses regarding E/I polarization, local feedforward adaptation, receptor heterogeneity, and potential coding strategies. However, these interpretations are currently speculative and may be overstated. Please explicitly label these as hypotheses, and connect them more directly to the structural data shown (rather than broader literature). Clarify what is supported by the data vs. what is extrapolation. 5. The study is limited to T5a in the OFF-pathway. Including at least a brief comparison with T4 neurons (ON-pathway) would significantly strengthen the paper. Even a preliminary check could reveal whether polyadic wiring architectures are a general feature or specific to OFF-motion circuits. Minor Comments 1. The abstract is dense and highly technical. Consider simplifying the sentences and placing more emphasis on the main discovery—that polyadic synapses create directional wiring motifs in T5 neurons. Additionally, several terms are highly specialized and may only be familiar to readers within this specific field. 2. Introduction nicely contextualized with connectomics. However, the transition into the classification of polyadic types is abrupt. Adding a sentence on why categorizing synapse types matters for circuit function would help. 3. The naming of polyadic types (a, ab, abc, etc.) could be confusing to readers unfamiliar with T5 subtypes. A figure/table summarizing each type with schematic icons would help. 4. Phrases like “typical wiring” are somewhat vague. Consider defining “canonical/expected wiring” instead. 5. The claim that polyadic morphology “denotes synchronous activation” needs clarification. Could asynchronous release probabilities disrupt this? Please discuss alternative interpretations. 6. Ensure recent Drosophila visual connectome studies (2023–2025) are cited, especially those using FlyWire and Codex datasets. 7. Minor grammatical edits needed - “could in principle be simultaneously transmitted” to “could in principle be transmitted simultaneously”, “polyadic synapses… remain severely understudied” to “polyadic synapses… remain understudied”. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? Reviewer #1: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: No ********** 3. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes ********** Reviewer #1: This manuscript addresses an important and understudied aspect of the Drosophila connectome - the role of polyadic synapses in shaping wiring architectures in the OFF-motion pathway, specifically in T5a neurons. The authors use FlyWire reconstructions to categorize polyadic synapse types and analyze their spatial distribution, introducing the concept of “co-T5s” as part of a directional wiring motif. This is potentially impactful, especially since polyadic synapses dominate the fly optic lobe but remain poorly understood. The manuscript is ambitious, bringing together connectomic analysis, structural categorization, and functional interpretation. However, while the findings are intriguing, the paper could be significantly strengthened by improvements in clarity, quantification, figure presentation, and the depth of discussion. Below, I outline major and minor comments. Major Comments 1. The categorization of eight polyadic synapse types (a, ab, ac, etc.) is descriptive but risks appearing arbitrary unless functionally or structurally validated. The authors need to strengthen the justification for why this classification is meaningful beyond taxonomy. For example, do different types show systematic differences in abundance, PSD size, presynaptic bouton morphology, or co-T5 spatial distribution? 2. Figure 1 is strong overall, but the classification of polyadic types (a, ab, abc, abcd) needs clearer labeling of T5 subtypes and more consistent color coding to improve accessibility for readers outside the field. 3. Figure 2. While distributions and abundances are reported, the manuscript sometimes presents qualitative descriptions without statistical backing. Please provide statistical comparisons across polyadic types, beyond abundance counts. Are differences in spatial distribution significant across Tm vs. CT1 inputs? Include sample sizes, error bars, and test statistics. Also, the distance seems to be higher for a compared to abcd (Fig.B vs Fig.I), but according to Figure A, a is nearer than abcd. 4. The discussion presents intriguing hypotheses regarding E/I polarization, local feedforward adaptation, receptor heterogeneity, and potential coding strategies. However, these interpretations are currently speculative and may be overstated. Please explicitly label these as hypotheses, and connect them more directly to the structural data shown (rather than broader literature). Clarify what is supported by the data vs. what is extrapolation. 5. The study is limited to T5a in the OFF-pathway. Including at least a brief comparison with T4 neurons (ON-pathway) would significantly strengthen the paper. Even a preliminary check could reveal whether polyadic wiring architectures are a general feature or specific to OFF-motion circuits. Minor Comments 1. The abstract is dense and highly technical. Consider simplifying the sentences and placing more emphasis on the main discovery—that polyadic synapses create directional wiring motifs in T5 neurons. Additionally, several terms are highly specialized and may only be familiar to readers within this specific field. 2. Introduction nicely contextualized with connectomics. However, the transition into the classification of polyadic types is abrupt. Adding a sentence on why categorizing synapse types matters for circuit function would help. 3. The naming of polyadic types (a, ab, abc, etc.) could be confusing to readers unfamiliar with T5 subtypes. A figure/table summarizing each type with schematic icons would help. 4. Phrases like “typical wiring” are somewhat vague. Consider defining “canonical/expected wiring” instead. 5. The claim that polyadic morphology “denotes synchronous activation” needs clarification. Could asynchronous release probabilities disrupt this? Please discuss alternative interpretations. 6. Ensure recent Drosophila visual connectome studies (2023–2025) are cited, especially those using FlyWire and Codex datasets. 7. Minor grammatical edits needed - “could in principle be simultaneously transmitted” to “could in principle be transmitted simultaneously”, “polyadic synapses… remain severely understudied” to “polyadic synapses… remain understudied”. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Polyadic synapses introduce unique wiring architectures in T5 cells of Drosophila PONE-D-25-42365R1 Dear Dr. Samara, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support . If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Krishna Moorthi Bhat, M.D., Ph.D. Academic Editor PLOS ONE Additional Editor Comments (optional): Dear Dr. Samara, I have had a competent reviewer look at your manuscript as well the revised version, and I myself have read the work, and am delighted to accept the work for publication in PLoS One. Congratulations and thank you for submitting your work to our journal. Best regards, Krishna M Bhat Academic Editor Reviewers' comments: Reviewer's Responses to Questions Comments to the Author Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions??> Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes ********** Reviewer #1: The authors have made substantial revisions in response to my previous feedback. All of my comments have been satisfactorily addressed, and the manuscript has significantly improved in clarity, organization, and scientific rigor. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No ********** |
| Formally Accepted |
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PONE-D-25-42365R1 PLOS ONE Dear Dr. Samara, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Professor Krishna Moorthi Bhat Academic Editor PLOS ONE |
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