Peer Review History
| Original SubmissionSeptember 17, 2025 |
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Dear Dr. Muwonge, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Feb 01 2026 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
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The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. We note that Figure 2 in your submission contain [map/satellite] images which may be copyrighted. All PLOS content is published under the Creative Commons Attribution License (CC BY 4.0), which means that the manuscript, images, and Supporting Information files will be freely available online, and any third party is permitted to access, download, copy, distribute, and use these materials in any way, even commercially, with proper attribution. For these reasons, we cannot publish previously copyrighted maps or satellite images created using proprietary data, such as Google software (Google Maps, Street View, and Earth). For more information, see our copyright guidelines: http://journals.plos.org/plosone/s/licenses-and-copyright. 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The following resources for replacing copyrighted map figures may be helpful: USGS National Map Viewer (public domain): http://viewer.nationalmap.gov/viewer/ The Gateway to Astronaut Photography of Earth (public domain): http://eol.jsc.nasa.gov/sseop/clickmap/ Maps at the CIA (public domain): https://www.cia.gov/library/publications/the-world-factbook/index.html and https://www.cia.gov/library/publications/cia-maps-publications/index.html NASA Earth Observatory (public domain): http://earthobservatory.nasa.gov/ Landsat: http://landsat.visibleearth.nasa.gov/ USGS EROS (Earth Resources Observatory and Science (EROS) Center) (public domain): http://eros.usgs.gov/# Natural Earth (public domain): http://www.naturalearthdata.com/ If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: Comments to the Authors General Assessment This manuscript presents a comprehensive retrospective analysis of Respiratory Syncytial Virus (RSV) epidemiology among Ugandan adults aged ≥65 years using 15 years of sentinel surveillance data (2010–2025). The topic is timely and relevant, especially given the recent expansion of RSV vaccine availability for older adults and the paucity of data from sub-Saharan Africa. The paper is well written, methodologically sound, and addresses a critical data gap in global respiratory infection surveillance. However, several methodological clarifications, analytical refinements, and interpretive cautions are warranted before the manuscript can be accepted for publication. The paper’s overall scientific contribution is strong, but minor revisions would enhance clarity, transparency, and robustness of inference. A. Scientific Rigor and Validity of Methods Strengths: • The use of 15-year sentinel surveillance data offers unprecedented longitudinal insight into RSV epidemiology in older African adults. • Laboratory confirmation via RT-PCR ensures diagnostic accuracy. • The statistical approach using Poisson regression with robust variance for prevalence ratios is appropriate. • Integration of COVID-19 period effects adds valuable context to temporal analysis. Concerns and Recommendations: 1. Selection Bias and Representativeness: The manuscript states that all adults ≥65 years in the sentinel database were included, but the denominator (overall population of elderly adults attending sentinel sites) is not discussed. Please clarify how surveillance enrollment was standardized across years and sites, and whether health-seeking behavior or site-level reporting changes could have biased prevalence estimates. 2. Handling of Missing Data: Hospitalization data were missing in 22.2% of records. Although the authors claim this is “unlikely to bias virological prevalence,” a sensitivity analysis (e.g., complete-case vs. imputed data) would strengthen this statement. 3. Definition of Pneumonia: Pneumonia was described as “clinician-diagnosed,” but diagnostic variability may exist. Please indicate whether this was based on clinical criteria, radiography, or ICD coding. 4. Confounding and Multivariable Model Building: Variables included in multivariable Poisson models should be justified more clearly (e.g., all covariates with p<0.2 in bivariate analysis or based on biological plausibility). The current description is insufficiently detailed. 5. Asthma Findings: The association between asthma and RSV infection (aPR 6.08; 95% CI: 1.18–31.26) and hospitalization (aPR 21.69; 95% CI: 7.50–62.71) is biologically plausible but driven by only 4 asthma cases. Please explicitly acknowledge the instability of these estimates and interpret them cautiously. B. Results and Data Interpretation Concerns: 1. Coinfection Rates: The authors report “no RSV–SARS-CoV-2 coinfections.” Given the known co-circulation of these viruses in 2022–2024, please comment on possible testing limitations or sample size constraints. 2. Interpretation of Seasonality: The discussion mentions peaks during the “dry season,” but results (Fig 5–6) show peaks in May–June—part of the rainy season. This needs correction or clearer justification of Uganda’s bimodal rainfall pattern. 3. Comparative Prevalence: When comparing RSV with influenza and SARS-CoV-2, please specify whether differences were statistically tested (e.g., pairwise comparisons with p-values). C. Discussion and Conclusions Recommendations: 1. The discussion could better differentiate surveillance-based prevalence from population-level incidence. The term “burden” should be qualified accordingly. 2. Add a brief paragraph on potential underestimation due to exclusion of afebrile cases, as the authors note fever was part of ILI/SARI inclusion. 3. The “immunity debt” hypothesis is well contextualized but could cite additional global literature (e.g., Baker et al., Science Translational Medicine, 2022). D. Clarity of Presentation and Structure Minor Editorial Suggestions: • Line edits: Correct small typographical errors (e.g., “instudies” → “in studies”). • Ensure consistent reporting of 95% CI formatting (use standard spacing and parentheses). • Clarify that percentages are based on illness episodes, not unique patients, as repeat visits were excluded but this should be reiterated. E. Overall Recommendation Recommendation: Minor Revision The manuscript is scientifically valuable and methodologically sound but requires clarification on data handling, interpretation of comorbidity associations, and correction of minor inconsistencies in presentation. With these adjustments, it would make a strong contribution to understanding RSV epidemiology in Africa’s aging populations. Reviewer #2: Overall, this is a well written manuscript on an important topic, of public health relevance, and for which there remains limited data. The following reflect relatively minor comments to strengthen the manuscript: 1) Introduction (paragraph 1-2): Consider focusing narrative around older adults. Introduction of information on incidence and prevention products for pediatric populations confuses the narrative. 2) Line 68-71 - Pooled prevalence among "all ages" and 5+ are 9 and 10% respectively in the reference included. 3) Lines 82-83: Consider updating to recommend all 3 available vaccines: https://www.cdc.gov/rsv/hcp/vaccine-clinical-guidance/adults.html 4) Line 109 - Suggest adding a brief justification of the age cutoff (65+) 5) Methods (statistical analysis) - how was site accounted for within multivariate analyses to account for correlation structure. 6) Overall / Line 186 - Can you clarify missingness for asthma by RSV status. Among RSV positive cases, number with asthma status reported (n=?) and number with asthma (n=2). Among RSV negative cases, number with asthma status reported (n=?) and number with asthma (n=2). Given the association between asthma and hospitalization is a key finding and that there are very few cases of asthma - this is key for interpretation. Suggest caution in presenting this finding without caveat in the abstract if missingness is very high and/or differential by RSV status. 7) Table 1. Interested in factors potentially contributed to increased enrollment in the 2022-2023 season. 8) Table 2. Define pre- and post- COVID periods with a footnote in the table. 9) Table 2 and line 221. Revise age group listed in the table to 65-69 (as accurate) 10) Lines 294-299 - Given high missing for commodities, suggest including n's in this narrative and/or Table 3. 11) Overall - Interested in authors interpretation of the non-significant seasonality. Consider adding language to the methods on enrollment practices noting any differences in number and proportion enrolled during wet/dry season. 12) Methods/Table 4 - Please provide further justification for parameters included/excluded from the model. Surprised to see age and site not adjusted for in models. 13) Lines 363-5 - Considering noting estimates rely on a single study in both Uganda and Tanzania. 14) Discussion (public health implications) - Consider commending on the implications of your findings for target age group for prevention activities (e.g., vaccination). 15) Discussion (limitations) - Key limitation of the study is the small number of cases despite 15 years of data (less than 1 case enrolled per week across all sites). Consider commenting on target sample going forward to inform national strategy on RSV prevention in older adults including a discussion on what is feasible given care seeking of older adults. E.g., Given targets of 50/week (across all ages) what is feasible/ideal in terms of individuals 65+. 16) Figure 5 - consider alternatively epi curves for RSV (only) for each of the 15 years similar to Figure 1 in Hamid et al. https://www.cdc.gov/mmwr/volumes/72/wr/mm7214a1.htm This would allow for a more clear understanding of how consistent seasonality was by year. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: Yes: Tinkhani Mbichila Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] To ensure your figures meet our technical requirements, please review our figure guidelines: https://journals.plos.org/plosone/s/figures You may also use PLOS’s free figure tool, NAAS, to help you prepare publication quality figures: https://journals.plos.org/plosone/s/figures#loc-tools-for-figure-preparation. NAAS will assess whether your figures meet our technical requirements by comparing each figure against our figure specifications. |
| Revision 1 |
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Respiratory Syncytial Virus burden among Ugandan Adults Aged ≥65 Years: A 15-Year Sentinel Surveillance Study of Prevalence, Coinfections, and Comorbidities (2010–2025) PONE-D-25-49096R1 Dear Dr. Muwonge, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support . If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Liling Chaw Academic Editor PLOS One Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions??> Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: (No Response) Reviewer #2: Comments thoughtfully address and manuscript revised accordingly. Revised language on primary question of concern (small sample size for asthma) incorporated into abstract, methods and discussion. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: Yes: Tinkhani Mbichila Reviewer #2: No ********** |
| Formally Accepted |
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PONE-D-25-49096R1 PLOS One Dear Dr. Muwonge, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS One. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Liling Chaw Academic Editor PLOS One |
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