Peer Review History
| Original SubmissionJanuary 11, 2025 |
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PONE-D-25-01841Assessing the real-world safety of Docetaxel for non-small cell lung cancer: insights from a comprehensive analysis of FAERS dataPLOS ONE Dear Dr. Wang , Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Jul 16 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." If this statement is not correct you must amend it as needed. Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf. 4. Please include a separate caption for each figure in your manuscript. 5. Please include your tables as part of your main manuscript and remove the individual files. Please note that supplementary tables (should remain/ be uploaded) as separate "supporting information" files. 6. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: This is a well-written study that examined the real-world safety of docetaxel--a common chemotherapy agent used to treat several types of solid tumors--here specifically in non-small cell lung cancer (NSCLC) patients. The authors leveraged adverse drug event (ADE) data from the publicly accessible FAERS from 2004 to 2024. Using several statistical methods, the authors identified multiple known ADEs but also several unlabeled events as well as age and gender differences in stratified analyses. The findings provide useful summary data to inform healthcare providers and patients regarding risk management in the use of docetaxel for NSCLC therapy. Nevertheless, the overall presentation could be significantly improved, and I have the following specific comments and concerns: 1. In the Introduction, the authors mentioned the five-year survival rate of NSCLC remains low. It would be more informative to provide actual number and source (e.g. 5-yr survival rate of late-stage NSCLC based on American Cancer Society’s Cancer Statistics (US) or WHO/IARC global survey). This allows readers to assess the updated information in context, especially in view of the recent improvement in lung cancer survival rates in some developed countries. 2. Regarding information on docetaxel, please briefly add the fact that it belongs to a general class of chemotherapy drugs (taxanes) that block cellular growth during mitosis, thus affecting both normal and tumor cells. 3. Since docetaxel is used primarily as a second-line drug or in combination therapy for NSCLC that has metastasized, it is sometimes difficult to tease out the ADEs of multiple treatments, even if docetaxel is reported as the primary suspected drug in the FAERS. Are data on first-line or combination treatment available so that investigators can sift through the cases to screen out confounding factors? 4. In the Methods section on statistical analysis, it is stated that an adverse event was identified as potential adverse reaction if any of the ROR, PRR, MGPS or BCPNN analysis methods met the positive determination threshold (as listed in Supplementary Tables 2). For example, the threshold criteria for ROR are the lower limit of 95% CI must be greater than 1 and number of events greater or equal to 3. However, when looking at the adverse events meeting the positive signal threshold (Supplementary Tables 3), I find some selected ADEs do not meet any of the positive threshold criteria. Again, as an example, the PT “malignant neoplasm progression” has ROR lower 95% CI=0.59 (not >1); PRR= -0.72 (not>=2); EBGM05=0.61 (not >2); IC025= -0.75 (not >0). Please explain and justify the threshold criteria. If there are any errors in this table, please correct. 5. It would be helpful to provide a website address or literature reference for the MedDRA dictionary mentioned in the Methods section. 6. In the study design (Figure 1), it shows that there are 1535 ADEs reporting docetaxel as the primary suspected drug and 4347 events of docetaxel induced ADEs. Please clarify the differences between the two searches and why only the former was included in the final analysis. 7. It seems the figure legends for Figures 1 to 3 are missing from the main manuscript. Also, Figure 3 is not cited in the text. Please add the missing information. 8. Please enlarge the font size and graph for Figure 2. It is difficult to view the variable labels as presented. 9. For Table 1, change the label for missing data from “Miss” to “Unknown.” 10. Please reformat Supplementary Tables 3 to 9 in the Supplementary Material file to ensure the table columns are wide enough to accommodate the numbers to prevent wrapping and allow clarity in viewing. Reviewer #2: This is a very interesting paper addressing the adverse effects of docetaxel. It presents a well-executed description of the findings, with an appropriate acknowledgment of the study’s limitations. For the sake of improved clarity and readability, I would suggest the following: Figure 1 could be refined, as it currently includes some dashes and symbols that seem out of place or may confuse the reader. In the adverse effects graph, the categories "Investigations" and "Social circumstances" are unclear. It would be helpful to provide a brief explanation of what these terms refer to in this context. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy . Reviewer #1: Yes: David W Chang Reviewer #2: Yes: Borja Aguinagalde, PhD, MD ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Assessing the real-world safety of Docetaxel for non-small cell lung cancer: insights from a comprehensive analysis of FAERS data PONE-D-25-01841R1 Dear Dr. Wang, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support . If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Guocan Yu Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Authors have satisfactorily addressed all of my comments and concerns. However, one minor detail concerning the alleged correction of missing information in Table 1 from "Miss" to "Unknown" or "NA" (not available) is not seen in the revised manuscript. Reviewer #2: Congratulations. I believe the authors have successfully addressed the reviewers' comments and incorporated the suggested improvements. This revised version is well-executed, and I am confident that readers will find it both informative and engaging ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy . Reviewer #1: Yes: David W Chang Reviewer #2: Yes: Borja Aguinagalde ********** |
| Formally Accepted |
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PONE-D-25-01841R1 PLOS ONE Dear Dr. Wang, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Guocan Yu Academic Editor PLOS ONE |
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