Peer Review History
| Original SubmissionJuly 7, 2024 |
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Dear Dr. Okumura Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Nov 16 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Vishal Chavda, MS, PhD, FCNIP Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please provide a complete Data Availability Statement in the submission form, ensuring you include all necessary access information or a reason for why you are unable to make your data freely accessible. If your research concerns only data provided within your submission, please write "All data are in the manuscript and/or supporting information files" as your Data Availability Statement. 3. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. Additional Editor Comments: Dear Authors, Thank you for submitting your manuscript to PLOS ONE. WE have completed the review process and received expert suggestions from the peers. After my careful evaluation and reviewers suggestions, your manuscript required major revisions. Please complete revisions on time and re-submit. Best, [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #2: I Don't Know Reviewer #3: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: No Reviewer #2: Yes Reviewer #3: Yes ********** Reviewer #1: The manuscript appears to be well-written in terms of technical language and clarity. However, there are a few areas where slight improvements can enhance readability: 1. Sentence Structure: Some sentences are quite long and could be split for clarity. Shorter sentences can make the text easier to follow. 2. Consistency: Ensure that terms and abbreviations are used consistently throughout the manuscript. For example, if you introduce a term like "AC5" or "ADA," make sure it is consistently abbreviated after the first mention. 3. Punctuation: Review for proper punctuation, especially in complex sentences. Commas can help clarify meaning and improve flow. 4. Technical Jargon: While the audience may be familiar with specific terms, consider briefly defining less common jargon or acronyms when first introduced. 5. Transitions: Use transitional phrases to improve the flow between sections and ideas, helping guide the reader through the results and discussions. Reviewer #2: Authors tackled to prevent from heart failure and arrhythmia by specifically targeting adenylyl cyclase isoform, while avoiding cardiac function suppression. First, they synthesized derivatives (V2E, V3E and V5E) of vidarabine, by the substitution 2’, 3’ and 5’ position of arabinose with a (dimethylamino) acetic acid group, to improve its poor solubility. Then confirmed an increased solubility of V2E, V3E and V5E compared to vidarabine. Further experimentally showed V2E, V3E and V5E reduced the 1) development of heart failure and 2) susceptibility to atrial fibrillation using mouse model. Overall idea is interesting, and approach is proper. However, I believe current manuscript needs visual improvement (type of graphs) and clarifications, including following points /questions/comments. Introduction. 1. Authors claimed that “AC5 is expressed specifically in the heart, with little expression in the lung [5]”. However, according to cited literature, AC5 is detected in the heart at comparable level to brain. Therefore, authors either modify the above-mentioned claim or include additional reference to support AC5 expression is specific to heart. Otherwise, have a discussion on this point. Method section. 2. Even though it is understandable from the study, authors should clearly describe animal species that was used in the study, otherwise it is unclear from their “animals” subsection. 3. Also, please include number of animals used in the study per group per experiment, as well as their sex. 4. Authors missing subsection for “cell culture” that describes cell line including its a. name, if it is primary culture cells then b. isolation procedure, c. cell culture conditions including media supplements, passage number and d. seeding density etc. 5. Please clarify why 30oC was chosen to conduct ADA mediated deamination study when ADA and V2E, V3E or V5E mixture was incubated for 5 min. 6. AF induction, why authors waited 10 minutes after IP administration of ISO at 15mg/kg? how this concentration was determined? (if adopted, needs a ref). 7. Measurement of fibrosis area in heart tissue, it is not clear for what was the size/field (as well as its unit) of tissue/images were analyzed to obtain AF area after Masson trichrome staining. Result section. In general, according to figure legend each dot in the graph represents individual data. However, it is not clear why some group has more individual data points than other group. Also, consistency of graph is important for the readers, why some example Fig 4A is bar graph with error bar while showing no individual data points, but Fig 4B shows individual data points. Please clearly state how many animals were used in that experiment for each figure (except cell culture study), because it is not clear if individual data points are repeated measurements from single animal or each dot represents different animals. 8. What was the half-life of V2E, V3E and V5E? 9. Authors should consider finding better way to present Figure 2-4. 10. Fig 5. For inserted scale bar, it’s unit is not described in the figure legend. As mentioned before, it is critical to include number of animal/ size of tissues analyzed for that experiment. Provided image does not clearly show dapi positive cells. 11. Fig 6. TUNEL assay, perhaps it is more informative to plot “number of positive stained cells/dapi positive cell” rather than “Tunel positive (%)” on the Y axis of the graph. Please add scale bar to the figure, if possible. Discussion. 12. Eventhough, authors claimed that “AC5KO revealed that genetic disruption of AC5 did not affect cardiac function at baseline [7]”, however their cited study indicated that conscious AC5KO mice showed significantly increased heart rate compared to WT. Therefore, it would be critical to discuss how current result could be affected by this. 13. Authors should discuss why rat neonatal cardiomyocytes were used for apoptotic assay (TUNEL), over mouse derived cardiomyocytes. If not, it should be noted as their experimental limitation(s). Reference. 14. References are not uniformly presented such as .[X] rather than [X]. Author contribution. 15. Could you please add name of author who conducted statistical analysis to “Author contribution” section under “statistical analysis” subsection? Reviewer #3: Authors do not provide enough validation of their synthesized compounds. They provide is a molecular weight for each of the compounds. It is recommended authors should include percent yields, proton NMR, and some sort of mass spectrometry trace, be it from an LC-MS, HPLC, or hi-res mass spectrometer. These are all standard forms of validation for synthesized compounds, and therefore should be reasonable expectations for the manuscript. Cardiac hypertrophy accompanies many forms of heart disease, including ischemic disease, hypertension, heart failure, and valvular disease. ventricular hypertrophy is associated with significantly increased risk of heart failure. In this context cellular calcium homeostasis also plays crucial role. Hence, it is recommended to check the effect of the vidarabine derivative on calcium homeostasis and cardiac hypertrophy. It is well known that the isoform AC5 deletion, results in protecting the heart from cardiomyopathy, chronic catecholamine stress, and chronic pressure overload. On the contrary, the overexpression of isoform AC6 leads to increased LV function, improved cAMP and Ca2+ handling, and may protect the heart from pressure overload-induced systolic and diastolic dysfunction. The author should check the effect of different vidarabine derivatives on the activity of AC6 as well. Numerous profibrotic factors have been identified at the molecular level such as TGFβ, IL11, AngII, which activate gene expression programs for myofibroblast activation. Therapeutic inhibition of profibrotic factor, which is the master‐regulator of fibrosis whether mediated by the vidarabine derivative would be significant finding. How Author has determined the dose of Vidarabine derivatives ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: Yes: Sara Abou Al-Saud Reviewer #2: No Reviewer #3: Yes: Rima Chattopadhyay ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step.
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| Revision 1 |
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Dear Dr. Okumura, There is a minor request by one of reviewers that I consider is easy to meet and helps on data transparency. Please,provide original pictures for all western blots as supplementary material. Please submit your revised manuscript by Aug 09 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Agustín Guerrero-Hernandez Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author Reviewer #2: All comments have been addressed Reviewer #3: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions??> Reviewer #2: Yes Reviewer #3: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #2: Yes Reviewer #3: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #2: No Reviewer #3: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #2: Yes Reviewer #3: Yes ********** Reviewer #2: Thanks for addressing the raised comment/questions. A few points from my side: 1) Authors should provide original pictures for all western blots these are shown in the supplementary figure (including molecular weight marker). 2) Please remove website link from the manuscript (page 18, at the end of subsection "measurement of fibrosis are in heart tissue"). Reviewer #3: All the questions asked are almost discussed and experiments also done in detailed manner except some which I could see asked by other reviewer probably beyond scope. Explanation for all the criticism seems reasonable ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #2: No Reviewer #3: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org |
| Revision 2 |
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Water-soluble vidarabine derivatives alleviate catecholamine-induced heart failure and arrhythmia without impairing cardiac function in mice PONE-D-24-27843R2 Dear Dr. Okumura, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support . If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Agustín Guerrero-Hernandez Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-24-27843R2 PLOS ONE Dear Dr. Okumura, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Agustín Guerrero-Hernandez Academic Editor PLOS ONE |
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