Peer Review History

Original SubmissionMarch 24, 2025
Decision Letter - Xinjun Lu, Editor

Dear Dr. Gibbs,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Jun 08 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols .

We look forward to receiving your revised manuscript.

Kind regards,

Xinjun Lu

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

2. When completing the data availability statement of the submission form, you indicated that you will make your data available on acceptance. We strongly recommend all authors decide on a data sharing plan before acceptance, as the process can be lengthy and hold up publication timelines. Please note that, though access restrictions are acceptable now, your entire data will need to be made freely accessible if your manuscript is accepted for publication. This policy applies to all data except where public deposition would breach compliance with the protocol approved by your research ethics board. If you are unable to adhere to our open data policy, please kindly revise your statement to explain your reasoning and we will seek the editor's input on an exemption. Please be assured that, once you have provided your new statement, the assessment of your exemption will not hold up the peer review process.

3. PLOS requires an ORCID iD for the corresponding author in Editorial Manager on papers submitted after December 6th, 2016. Please ensure that you have an ORCID iD and that it is validated in Editorial Manager. To do this, go to ‘Update my Information’ (in the upper left-hand corner of the main menu), and click on the Fetch/Validate link next to the ORCID field. This will take you to the ORCID site and allow you to create a new iD or authenticate a pre-existing iD in Editorial Manager.

4. We note that you have included the phrase “data not shown” in your manuscript. Unfortunately, this does not meet our data sharing requirements. PLOS does not permit references to inaccessible data. We require that authors provide all relevant data within the paper, Supporting Information files, or in an acceptable, public repository. Please add a citation to support this phrase or upload the data that corresponds with these findings to a stable repository (such as Figshare or Dryad) and provide and URLs, DOIs, or accession numbers that may be used to access these data. Or, if the data are not a core part of the research being presented in your study, we ask that you remove the phrase that refers to these data.

5. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

Reviewer #1: Yes

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #1: Yes

Reviewer #2: Yes

**********

Reviewer #1: Referring to line 82, mentioning the 3Rs could further enhance the scientific soundness of the statement: https://nc3rs.org.uk/who-we-are/3rs. Additionally, authors could mention the FDA Modernization Act 2.0.

The authors should mention the terms microphysiological system and state organ-on-chip models. (line 86)

Referring to lines 89 to 115, the authors must focus on the main thesis statement and limit the text related to organoids.

Referring to lines 123 to 126, the authors are advised to compare the models they mentioned. It would help the reader better understand the current model's novelty and limitations.

The current research topic is interesting; authors should also consider providing a graphical abstract of their study.

Authors must consistently use the same abbreviation of induced pluripotent stem cells throughout the manuscript.

iPSCs are typically cultured on matrigel-coated surfaces; why do authors prefer Lamaninin over matrigel?

The authors should mention their study's limitations in the discussion section and expand the section on its potential implications.

Authors must label all the histological images with the proper cell type/layer.

Reviewer #2: The study of Brueske et al, aimed to determine whether incorporation of the human iPSCs into the hydrogel of the human TERT-immortalized keratinocytes and fibroblasts would improve the phenotype of the reconstructed gingival epithelium. Interestingly that such reconstructed human gingiva models demonstrated augmented keratinocyte proliferation within the epithelium, enhanced the thickness of the resultant epithelium, improved differentiation and interdigitation of the epithelium into the collagen hydrogel compared to the standard model developed from TERT cells only. Based on these data the authors conclude that the new iPSC-supplemented gingival model phenotypically resembles the native gingiva much accurately than the earlier models. The study characterises the models with examining morphological changes, i.e.: H&E histology and immunohistochemistry chromosome in situ hybridization and the TUNEL assay. Overall, the data look convincing, however, it is highly recommended that in the future studies the authors will employ combined assessment of structural and physiological changes, for the bilateral characterisation of the models and matching of the form and function.

There are few aspects after considering of which the manuscript could be accepted for publication:

• The images with the histology are of very low quality. Dear authors, please provide the images of a publication quality.

• The figure legends are provided inside the chapters of the Results section, which is a bit unusual and inconvenient. Dear authors, please place the figure legends separately, after the References, or after the Figures.

• In the Figures the P-values are represented as < 0.05, whereas in the text the p-values are given as a certain number, e.g. = 0.0424. Dear authors, please make it uniform for both.

• In the Figure 6 the images A-D contain the value of the scale bars (i.e. 10um, 100um), whereas the other Figures (5 B, C), 4 (A), 3 (A, B), 2 (A, B), and 1 (A, C) do not have these values. Dear authors, please make things uniform.

• In the experiments with the lamina propria (Figure 6) the number of the experiments is not stated. Dear authors, please provide the n-numbers.

• The Latin used throughout the text must be Italic, i.e.: in situ – line 43; e.g. – lines 76, 102, 105, 128; in vitro – line 357, etc.

**********

what does this mean? ). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy

Reviewer #1: No

Reviewer #2: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org

Revision 1

June 05, 2025

Response Letter Research Article, Manuscript Number: PONE-D-25-15760

Dear Editor,

We would like to thank you and the reviewers for providing valuable comments and for their time and effort reviewing our work. These reviewer comments combined have provided constructive and helpful criticism of our work and allowed us to further improve the quality of our manuscript.

We have clearly identified the responses in the letter and kept the track changes on in the manuscript. As requested we also provide an unmarked version of the revised manuscript. Please find the response to reviewer questions below and revised manuscript.

We appreciate your consideration of our manuscript for publication in PLOS ONE.

With Kind Regards,

Sue Gibbs

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

Answer: The style requirements have been checked and the manuscript meets the style requirements.

2. When completing the data availability statement of the submission form, you indicated that you will make your data available on acceptance. We strongly recommend all authors decide on a data sharing plan before acceptance, as the process can be lengthy and hold up publication timelines. Please note that, though access restrictions are acceptable now, your entire data will need to be made freely accessible if your manuscript is accepted for publication. This policy applies to all data except where public deposition would breach compliance with the protocol approved by your research ethics board. If you are unable to adhere to our open data policy, please kindly revise your statement to explain your reasoning and we will seek the editor's input on an exemption. Please be assured that, once you have provided your new statement, the assessment of your exemption will not hold up the peer review process.

Answer: All authors agree with making data available on Mendeley Data. The data has been placed in a repository, which will be made public upon acceptance of our manuscript.

3. PLOS requires an ORCID iD for the corresponding author in Editorial Manager on papers submitted after December 6th, 2016. Please ensure that you have an ORCID iD and that it is validated in Editorial Manager. To do this, go to ‘Update my Information’ (in the upper left-hand corner of the main menu), and click on the Fetch/Validate link next to the ORCID field. This will take you to the ORCID site and allow you to create a new iD or authenticate a pre-existing iD in Editorial Manager.

Answer: The corresponding author ORCID ID has been added.

4. We note that you have included the phrase “data not shown” in your manuscript. Unfortunately, this does not meet our data sharing requirements. PLOS does not permit references to inaccessible data. We require that authors provide all relevant data within the paper, Supporting Information files, or in an acceptable, public repository. Please add a citation to support this phrase or upload the data that corresponds with these findings to a stable repository (such as Figshare or Dryad) and provide and URLs, DOIs, or accession numbers that may be used to access these data. Or, if the data are not a core part of the research being presented in your study, we ask that you remove the phrase that refers to these data.

Answer: We have removed the section referring to the data not shown, as it is no a core part of the research presented. See revised text: Page 18, line 429-433.

5. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

Answer: The reference list has been reviewed for completeness and correctness. No retracted papers are included in the reference list.

Review Comments to the Author

Reviewer #1

Comment 1:

Referring to line 82, mentioning the 3Rs could further enhance the scientific soundness of the statement: https://nc3rs.org.uk/who-we-are/3rs. Additionally, authors could mention the FDA Modernization Act 2.0.

Answer: See revised introduction: Page 4, line 85-89, “To overcome these limitations …”.

Comment 2:

The authors should mention the terms microphysiological system and state organ-on-chip models. (line 86)

Answer: See revised introduction: Page 4, line 90-96, “This has boosted …”.

Comment 3:

Referring to lines 89 to 115, the authors must focus on the main thesis statement and limit the text related to organoids.

Answer: See revised introduction: Page 5.

Comment 4:

Referring to lines 123 to 126, the authors are advised to compare the models they mentioned. It would help the reader better understand the current model's novelty and limitations.

Answer: See revised introduction: Page 6, line 136-145, “Similar models have been developed …”.

Comment 5:

The current research topic is interesting; authors should also consider providing a graphical abstract of their study.

Answer: Thank you for the suggestion. We have added a graphical abstract.

Comment 6:

Authors must consistently use the same abbreviation of induced pluripotent stem cells throughout the manuscript.

Answer: The manuscript has been revised and the abbreviations have been updated.

Comment 7:

iPSCs are typically cultured on matrigel-coated surfaces; why do authors prefer Lamaninin over matrigel?

Answer: The justification for the use of laminin as coating solution has been added to the subsection “iPSCs” of the Materials and Methods section. See revised materials & methods section: Page 8, line 180-181, “Laminin 521 is an animal-free product.”.

Comment 8:

The authors should mention their study's limitations in the discussion section and expand the section on its potential implications.

Answer: See revised discussion: Page 24, line 581-585, “Limitations of this study include …”.

Comment 9:

Authors must label all the histological images with the proper cell type/layer.

Answer: The figures and legends have been revised. We added labels for the epithelium and lamina propria to all figures containing histological images, as well as labels for cell type to the figure 5 to make it easier to distinguish between fibroblasts and keratinocytes.

Reviewer #2

Comment 1:

The study of Brueske et al, aimed to determine whether incorporation of the human iPSCs into the hydrogel of the human TERT-immortalized keratinocytes and fibroblasts would improve the phenotype of the reconstructed gingival epithelium. Interestingly that such reconstructed human gingiva models demonstrated augmented keratinocyte proliferation within the epithelium, enhanced the thickness of the resultant epithelium, improved differentiation and interdigitation of the epithelium into the collagen hydrogel compared to the standard model developed from TERT cells only. Based on these data the authors conclude that the new iPSC-supplemented gingival model phenotypically resembles the native gingiva much accurately than the earlier models. The study characterises the models with examining morphological changes, i.e.: H&E histology and immunohistochemistry chromosome in situ hybridization and the TUNEL assay. Overall, the data look convincing, however, it is highly recommended that in the future studies the authors will employ combined assessment of structural and physiological changes, for the bilateral characterisation of the models and matching of the form and function.

Answer: We thank the reviewer for these suggestions and agree that future work should look into functionality of the model enhanced with the iPSCs, as well as look into the mechanisms underlying the effect the iPSCs have on the surrounding cells. This has now been added as a future perspective.

See revised discussion: Page 25, line 589-591, “Furthermore, it should be determined…”.

Comment 2:

The images with the histology are of very low quality. Dear authors, please provide the images of a publication quality.

Answer: In the PDF build for submission the figures are shown in lower resolution and the higher resolution images can be accessed by clicking on the link in the upper corner. We have also updated the figures with even higher resolution images.

Comment 3:

The figure legends are provided inside the chapters of the Results section, which is a bit unusual and inconvenient. Dear authors, please place the figure legends separately, after the References, or after the Figures.

Answer: We are following the guidelines for authors from PLOS One, which request the figure captions to be placed in the manuscript text in read order, immediately following the paragraph where the figure is cited.

Comment 4:

In the Figures the P-values are represented as < 0.05, whereas in the text the p-values are given as a certain number, e.g. = 0.0424. Dear authors, please make it uniform for both.

Answer: The manuscript has been updated and the p-values are now mentioned as < 0.05.

Comment 5:

In the Figure 6 the images A-D contain the value of the scale bars (i.e. 10um, 100um), whereas the other Figures (5 B, C), 4 (A), 3 (A, B), 2 (A, B), and 1 (A, C) do not have these values. Dear authors, please make things uniform.

Answer: All figures have been updated and the values of the scale bars are now exclusively in the legend of the figures.

Comment 6:

In the experiments with the lamina propria (Figure 6) the number of the experiments is not stated. Dear authors, please provide the n-numbers.

Answer: The figured legend has been revised and the number of experiments is now stated. See revised legend: Page 21, line 494-496.

Comment 7:

The Latin used throughout the text must be Italic, i.e.: in situ – line 43; e.g. – lines 76, 102, 105, 128; in vitro – line 357, etc.

Answer: The manuscript has been updated and the corresponding text changed to italics.

Attachments
Attachment
Submitted filename: Response to Reviewers.docx
Decision Letter - Xinjun Lu, Editor

<p>Incorporation of iPSCs together with TERT-immortalized keratinocytes and fibroblasts into reconstructed human gingiva enhances phenotype of gingival epithelium.

PONE-D-25-15760R1

Dear Dr. Gibbs,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager®  and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Xinjun Lu

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions??>

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #1: Yes

Reviewer #2: Yes

**********

Reviewer #1: The authors revised the manuscript according to the recommendations and provided a satisfactory response to the queries raised. Considering this, the manuscript appears suitable for publication in PLOS One.

Reviewer #2: I am satisfied with the revisions made to the manuscript by Brueske et al. and have no objections to its acceptance for publication in PLOS ONE.

**********

what does this mean? ). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy

Reviewer #1: No

Reviewer #2: Yes:  Dr Vsevolod Telezhkin

**********

Formally Accepted
Acceptance Letter - Xinjun Lu, Editor

PONE-D-25-15760R1

PLOS ONE

Dear Dr. Gibbs,

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team.

At this stage, our production department will prepare your paper for publication. This includes ensuring the following:

* All references, tables, and figures are properly cited

* All relevant supporting information is included in the manuscript submission,

* There are no issues that prevent the paper from being properly typeset

You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps.

Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

If we can help with anything else, please email us at customercare@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Xinjun Lu

Academic Editor

PLOS ONE

Open letter on the publication of peer review reports

PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.

We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.

Learn more at ASAPbio .