Peer Review History
| Original SubmissionNovember 19, 2024 |
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PONE-D-24-51611Enhanced Cytotoxicity of T-DM1 in HER2-low Carcinomas via Autophagy InhibitionPLOS ONE Dear Dr. Xin, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Jan 29 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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In your cover letter, please note whether your blot/gel image data are in Supporting Information or posted at a public data repository, provide the repository URL if relevant, and provide specific details as to which raw blot/gel images, if any, are not available. Email us at plosone@plos.org if you have any questions. 5. We notice that your supplementary figures are uploaded with the file type 'Figure'. Please amend the file type to 'Supporting Information'. Please ensure that each Supporting Information file has a legend listed in the manuscript after the references list. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes Reviewer #3: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: No ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The manuscript explores the potential of combining T-DM1, an antibody-drug conjugate, with autophagy inhibitors to enhance its cytotoxicity in HER2-low gastric carcinoma cells. The authors concluded that T-DM1 alone exhibits limited cytotoxicity in HER2-low carcinoma cells due to the activation of cytoprotective autophagy. However, inhibiting autophagy pharmacologically significantly increases T-DM1’s cytotoxic effects by promoting its lysosomal fusion and facilitating the release of its active cytotoxic agent, emtansine. Comments: The study largely repurposes previously explored concepts by combining T-DM1 with autophagy inhibitors, an approach that has already been examined in other contexts. It does not provide groundbreaking insights or novel mechanisms specific to HER2-low gastric cancer. While the manuscript mentions the involvement of the Akt/mTOR pathway and autophagy modulation, it fails to thoroughly investigate the molecular interactions or provide sufficient evidence to establish causal relationships between autophagy inhibition and the enhanced efficacy of T-DM1. The figures and results sections include excessive repetition, particularly in the presentation of apoptotic and autophagy-related assays. Streamlining this information would improve clarity and enhance the manuscript's readability. The manuscript lacks detailed descriptions of the statistical analyses performed, including criteria for significance and the sample sizes used for each experiment. This omission undermines the reproducibility and robustness of the findings. The study does not adequately compare the efficacy of the proposed combination therapy with existing treatment options for HER2-low gastric cancer, limiting its clinical relevance and applicability. Phrases such as "significantly enhanced cytotoxicity" are used without providing clear quantitative benchmarks, leaving the practical significance of the findings unclear. The discussion fails to place the findings within the broader landscape of HER2-low gastric cancer research. Conflicting evidence or alternative interpretations are not sufficiently addressed, leaving gaps in the contextual analysis. The authors assert that autophagy inhibition may have universal applications across various tumor types but provide no supporting evidence beyond the context of HER2-low gastric cancer cells. This weakens the broader impact of the conclusions. Reviewer #2: In the manuscript entitled: “Enhanced cytotoxicity of T-MD1 in HER2-low carcinomas via autophagy inhibition”, Zhang et al. showed that T-DM1 induces autophagy and combination of T-DM1 with autophagy inhibitors increases T-DM1 efficacy in HER2-low gastric cancer. A potential expansion of the use of T-DM1 and may be other HER2-targeted therapies to tumors with low HER2 expression is significant since the HER2-low patient subpopulation usually exhibits an aggressive disease progression. Despite that, there are several major points that need to be addressed as listed below: Major points: 1- All the IF images need quantification. 2- In Fig. 1B, it was claimed that endocytosis happens at 6 hrs, however, it is not visible from the image provided. 3- Is there any change in T-DM1 internalization upon combination of T-DM1 with autophagy inhibitors. 4- It is not clear how the apoptotic cells were quantified. Were they the Annexin V+ and PI- cells corresponding to early apoptosis or Annexin V+ PI+ cells corresponding to late apoptosis? 5- Is DM1 treatment also inducing autophagy induction upon mTOR inhibition? 6- The reduction of cell viability upon combination of T-DM1 with the autophagy inhibitors is not convincing. 7- Since the major mechanism of action of T-DM1 is mitotic arrest, it is suggested to examine the mitotic arrest markers in HER2-low cells treated with T-DM1 and autophagy inhibitor combination. 8- To eliminate the potential cell line-specific effects, it is suggested that the key experiments, e.g., reduced cell viability and apoptosis induction upon combination of T-DM1 with the autophagy inhibitors are repeated in a second HER2-low gastric cancer cell line. Reviewer #3: In this manuscript, Zhang and colleagues aimed to enhance the therapeutic efficacy of Ado-trastuzumab emtansine (T-DM1) in HER2-low gastric carcinoma cells, which typically exhibit limited responsiveness to this treatment. By investigating the role of autophagy in T-DM1 resistance, the authors discovered that T-DM1 induces cytoprotective autophagy via the Akt/mTOR pathway in HER2-low SGC7901 cells. This autophagy activation mitigates the drug's cytotoxic effects. However, pharmacological inhibition of autophagy significantly enhanced T-DM1-induced cytotoxicity and apoptosis by promoting lysosomal degradation of the drug and facilitating the release of its cytotoxic payload, emtansine. These findings highlight a novel strategy for improving T-DM1 efficacy in HER2-low gastric cancer by combining it with autophagy inhibitors, potentially broadening the therapeutic applications of T-DM1. That said, there are several points that should be addressed before the manuscript is suitable for publication: Major Comments: 1. In Figure 1A, the authors demonstrate that the HER2-low cell line exhibits limited responsiveness to T-DM1. To strengthen this claim, it would be beneficial to include a HER2-positive cell line as a control. A direct comparison of T-DM1 cytotoxicity between HER2-high and HER2-low cell lines would provide clearer evidence of the differential sensitivity. 2. The manuscript discusses the Akt/mTOR pathway's involvement in autophagy induced by T-DM1. However, to provide stronger mechanistic insight, the authors should consider using specific inhibitors of this pathway. This would validate whether the Akt/mTOR pathway is indeed a critical mediator of autophagy following T-DM1 treatment, as suggested in Figure 5. 3. While statistical analyses are mentioned, the manuscript lacks consistent information on the specific tests used for each figure. Including detailed descriptions of the statistical tests applied and the rationale for their selection would enhance the credibility and reproducibility of the findings. 4. The discussion could benefit from a more comprehensive comparison with existing studies on T-DM1 and other ADCs in HER2-low cancers, such as breast cancer. Additionally, elaborating on the broader therapeutic implications, such as the potential application of autophagy inhibitors in other HER2-low cancers or ADC therapies, would add significant value. Minor Comments: - The WB analysis for HER2 expression in Supplemental Figure 1 should be prioritized over immunofluorescence (IF) for its quantitative accuracy. Including a HER2-positive GC cancer cell line in the comparison panel would further enhance the relevance of the findings. - There is some inconsistency in the use of terms such as "autophagy inhibition" and "blocking autophagy." Ensuring consistency in terminology throughout the manuscript would improve readability. A professional language review might also be beneficial to refine clarity and conciseness. By addressing these points, the manuscript will be significantly strengthened and better positioned for publication. The study presents important insights into enhancing T-DM1 efficacy in HER2-low gastric cancer, and these revisions would further solidify the impact and rigor of the work. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy . Reviewer #1: No Reviewer #2: No Reviewer #3: Yes: V Rodilla ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step.
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| Revision 1 |
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<p>Enhanced cytotoxicity of T-DM1 in HER2-low carcinomas via autophagy inhibition PONE-D-24-51611R1 Dear Dr. Xin, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Ruo Wang Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: (No Response) ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: (No Response) ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors answers all comments and they improve the manuscript. The manuscript is accepted for publication ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy . Reviewer #1: No ********** |
| Formally Accepted |
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PONE-D-24-51611R1 PLOS ONE Dear Dr. Xin, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Ruo Wang Academic Editor PLOS ONE |
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