Peer Review History
| Original SubmissionOctober 10, 2024 |
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PONE-D-24-45409Multi-view Clustering via Global-view Graph LearningPLOS ONE Dear Dr. Li, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. I recommend minor revisions for acceptance. To enhance clarity and reproducibility, the authors should include hardware specifications and execution times to support efficiency claims, refine language and structure for readability, and add visual aids (such as convergence curves) to substantiate performance. A brief discussion of any limitations. Please submit your revised manuscript by Dec 26 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Wen Li Academic Editor PLOS ONE Journal requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please note that PLOS ONE has specific guidelines on code sharing for submissions in which author-generated code underpins the findings in the manuscript. In these cases, all author-generated code must be made available without restrictions upon publication of the work. Please review our guidelines at https://journals.plos.org/plosone/s/materials-and-software-sharing#loc-sharing-code and ensure that your code is shared in a way that follows best practice and facilitates reproducibility and reuse. 3. Thank you for stating the following financial disclosure: [This work was supported by Natural Science Foundation of Guangdong Province under Grant 2023A1515011845.]. Please state what role the funders took in the study. If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." If this statement is not correct you must amend it as needed. Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf. 4. Thank you for uploading your study's underlying data set. Unfortunately, the repository you have noted in your Data Availability statement does not qualify as an acceptable data repository according to PLOS's standards. At this time, please upload the minimal data set necessary to replicate your study's findings to a stable, public repository (such as figshare or Dryad) and provide us with the relevant URLs, DOIs, or accession numbers that may be used to access these data. For a list of recommended repositories and additional information on PLOS standards for data deposition, please see https://journals.plos.org/plosone/s/recommended-repositories. 5. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Additional Editor Comments : The paper presents an approach to multi-view clustering, with potential for practical application. To enhance clarity and support reproducibility, please include specific hardware details and execution times to substantiate your efficiency claims, refine language for readability, add visual aids (such as convergence curves) to illustrate performance, and briefly acknowledge any limitations, like parameter sensitivity. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The paper presents a well-executed approach to multi-view clustering, making significant contributions by offering both innovative solutions and practical applications. With some minor revisions, particularly in terms of experimental details, language refinement, and enhanced visual aids, the paper will become a strong candidate for publication. This paper introduces several key innovations and contributions. First, unlike many existing methods that require post-processing steps such as K-means, this approach directly assigns cluster labels, simplifying the process and reducing potential sources of error. Second, the proposed optimization algorithm is highly efficient, with lower computational complexity than traditional methods. This efficiency makes the algorithm practical for large datasets and devices with limited computing power, such as mobile phones, drones, and edge computing gateways. Third, the method consistently outperforms existing multi-view clustering algorithms across multiple datasets, demonstrating superior clustering accuracy and strong generalization across diverse real-world scenarios. Finally, a key strength of the method is its reduced need for computational resources, making it particularly suitable for low-power environments. I offer the following suggestions for minor revisions. First, provide more detailed hardware configurations, including CPU, RAM, and GPU specifications, along with execution times, to support the claims about the low resource requirements. This additional information will help readers assess the practical applicability of the method and enhance reproducibility. Second, some sentences could be refined for greater clarity. A thorough proofreading to correct minor grammatical issues and improve sentence flow would enhance readability. For example, the sentence “Our method cannot capture the complementary and global information from multiple views” could be rephrased as “Without parameter tuning, the method cannot fully capture complementary and global information from multiple views.” Third, in certain sections, such as the Discussion, the combination of different topics (e.g., performance and theoretical explanation) makes the text harder to follow. Separating these topics into distinct paragraphs would improve clarity. Finally, alongside numerical performance metrics, incorporating visual elements such as convergence curves or clustering accuracy plots would make the results more intuitive and accessible to readers. Reviewer #2: General Evaluation The paper introduces a method for multi-view clustering based on Global-view Graph Learning (MCGGL), which directly integrates complementary information across multiple data views. The paper presents novel insights into simplifying the clustering process and achieving efficient computation while maintaining high performance. Overall, I recommend accepting the paper with minor revisions. Novelty and Contributions The paper provides several notable contributions to the multi-view clustering field: Unified Global-view Graph Learning: The method integrates information from multiple views without needing post-processing, such as K-means, to assign cluster labels. This streamlining of the clustering process addresses the shortcomings of traditional methods that rely on multiple steps, thus simplifying implementation and reducing computational steps. Enhanced Efficiency: The proposed algorithm significantly reduces computational complexity, making it well-suited for deployment on low-power devices and large datasets. The efficiency of the method is an important contribution, particularly given the rising demand for resource-efficient machine learning solutions. Robust Clustering Performance: The model's performance on several benchmark datasets shows improvement over existing methods. The consistent results across datasets reflect the method's adaptability and robustness in handling diverse data types. Complementary View Integration: The Global-view Graph approach effectively combines complementary and specific information from each view. This multi-view representation allows for a more comprehensive clustering result, capturing more detailed relationships across different perspectives of the data. Suggestions for Revisions Theoretical Clarification: Unclear Descriptions: Some theoretical aspects of the method could benefit from further elaboration. For example, the process of constructing the Global Affinity Matrix and how it captures the "complementary information" from multiple views is only briefly mentioned. A more detailed breakdown of this step, with mathematical explanations, would help readers understand how the model works and why it performs well compared to others. Weight Parameter Interpretation: The paper discusses adaptive learning of weight parameters for different views, but the explanation lacks clarity. Providing a more intuitive explanation, possibly with examples, on how the weights are dynamically adjusted for each view would improve comprehension. Structure and Flow: Related Work: The Related Work section could benefit from a clearer separation between different types of multi-view clustering approaches. Grouping similar methods (e.g., spectral clustering, subspace clustering) would make the review more coherent and provide a better context for the proposed method’s novelty. Discussion Section: The discussion on performance metrics and theoretical insights could be separated for better clarity. Mixing performance analysis with theoretical explanations makes it harder to follow. A more distinct division of topics would enhance readability. Experimental Expansion: Convergence and Efficiency Curves: Including graphs that show the convergence behavior of the proposed method, as well as a comparison of runtime versus dataset size, would visually reinforce the efficiency claims. These plots would allow readers to see how quickly the model converges and how it scales with different dataset sizes. Discussion of Limitations: A brief discussion of the method's limitations, such as its sensitivity to certain parameters, would provide a more balanced view and offer directions for future improvements. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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PONE-D-24-45409R1Multi-view Clustering via Global-view Graph LearningPLOS ONE Dear Dr. Li, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Mar 12 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Wen Li Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #3: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #3: Partly ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #3: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #3: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #3: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: This paper proposes an efficient multiview spectral clustering method that constructs a Global-view Graph to integrate complementary information from different views. Unlike standard spectral clustering, their method directly assigns cluster labels without post-processing, such as K-means. After revisions, this paper meets the criteria for acceptance. Reviewer #3: This work studies a graph-based method for multiview spectral clustering. While the structure is clear, I have the following concerns: 1. On page 6, in Equation (11), how is (11) derived from (9)? The Frobenius norm of \( ||X||_F = \sqrt{\sum_{i,j} X_{ij}^2} \), not merely the sum of all elements. 2. On page 6, in Equation (12), are the weights \( W_v \) and \( W \) guaranteed to be nonnegative? 3. In Equations (17) and (6), what is the difference between \( S_i^T \cdot 1_n = 1 \) and \( s_i 1_n = 1 \)? 4. On pages 7 and 8, does the proof establish Lemma 1? Additionally, how does it show the convergence of Algorithm 1? ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #3: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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Multi-view Clustering via Global-view Graph Learning PONE-D-24-45409R2 Dear Dr. Li, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Wen Li Academic Editor PLOS ONE Additional Editor Comments (optional): This presentation has made modifications based on the referees' report. So I recommend accepting the revised version for publication on PLOS One Reviewers' comments: |
| Formally Accepted |
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PONE-D-24-45409R2 PLOS ONE Dear Dr. Li, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Wen Li Academic Editor PLOS ONE |
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