Peer Review History
| Original SubmissionOctober 22, 2024 |
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PONE-D-24-45075Vigna radiata Extracts in Pumpkin and Soya Bean Oil: A Novel Therapeutic Approach for Alzheimer's diseasePLOS ONE Dear Dr. Bukhari, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Jan 27 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Kind regards, Vara Prasad Saka Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. To comply with PLOS ONE submissions requirements, in your Methods section, please provide additional information regarding the experiments involving animals and ensure you have included details on (1) methods of sacrifice, (2) methods of anesthesia and/or analgesia, and (3) efforts to alleviate suffering. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: No Reviewer #2: Partly Reviewer #3: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: No Reviewer #3: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: No Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No Reviewer #2: No Reviewer #3: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: This is a very ambitious report of the components and effects of plant extracts on an animal model of Alzheimer's disease. The authors attempt to chemically characterize the extract, perform toxicology, behavioral, brain biochemistry and histological studies all in one manuscript leading to the omission of critical design elements. Many needed descriptions of the experimental design are absent. Rats and mice are indicated (Materials and Methods section under Animals) as being used but it is not always clear which experiments used rats and which used mice. The number and species of experimental units in all data figures and tables is unspecified. The timing, frequency and duration of experimental therapeutic dosing is not specified. Was some criteria for verification of AD phenotype used, what criteria were used for inclusion or exclusion of animals? Were evaluators blinded as to the group? Animals randomized? Figures are not interpretable as given. Figure legends do not include statistical tests utilized, the meaning of multiple asterisks, the number of experimental units or the species. Authors need to specify the exact number of experimental units allocated to each group and the total number in each group for each figure. In addition, if groups are smaller than 10 it is preferable to plot each animals data point, if groups are greater than 10 then SD (or median and range) is preferable to SEM. ANOVA with repeated measures is specified but what measures were repeated is not mentioned (Figures 4 through 9, are those measures before and after treatment). Were multiple therapies applied in the same animal? Trinaing is mentioned for behavioral tasks but time frame and criteria for adequacy not mentioned Authors indicate that all relevant data are included in the manuscript but this is not accurate as only means and SEMs (with no number of experimental units) are included. PLOS ONE Policy states "PLOS journals require authors to make all data necessary to replicate their study’s findings publicly available without restriction at the time of publication. .... For example, authors should submit the following data: • The values behind the means, standard deviations and other measures reported; • The values used to build graphs; • The points extracted from images for analysis. " Figure 9 is mislabelled. Figure 13 suggest that a (single?) dose of extract restores AD-induced brain architecture. It seems unlikely that these are representative images. Many references are incomplete. Authors may benefit by consultingthe ARRIVE checklists for pre-clinical animal studies - https://www.equator-network.org/reporting-guidelines/improving-bioscience-research-reporting-the-arrive-guidelines-for-reporting-animal-research/ Reviewer #2: Thank you for your manuscript. I explain my answers to the question#1-4. #1.I found that your conclusion is mostly supported by the data, but I couldn't find the data that the content of acetylcholine decreased as you mentioned in the manuscript. In addition, I don't think that the high concentration (500 mg/kg) showed the greatest improvement, followed by the low concentration(250 mg/kg) (Figure 7) as you mentioned because there was no statistical analysis. #2. As I mentioned in #1, because of the lack of stastical analysis in some data, I would like you to confirm the statistics. #3. As I mentioned in #1, I couldn't find the data that the content of acetylcholine decreased as you mentioned in the manuscript. And it seemed unclear that you described the recovery of associated motor and non motor functions in Effect of VRPO and VRSO on acetyl cholinesterase (Figure 9). #4. I thought the majority of the manuscript was good, but I found some of it to be overly worded, e.g. "curing" (there is no definition of "curing" and it was only the animal model of AD that is being evaluated. I thought that it was better to use "administraion" instead of curing). <additional comments=""> You need to provide more information about anethesia in page 4 and material and methods. In material and methods, it is necessary to clarify which sex, how many animals, and what age in weeks were used in each experiment, and to specify that the test substance treatment group is hitting the AD-like model (readers could guess the situation but it is needed to be written). In addition, the route of administration of the test substance, duration of administration, and the specified timing at which each evaluation was performed, are also needed in material and methods. In results, under the title of each figure or table, a short description of the data, the number of animals, the meaning of error bars and statistical symbols should be written. And could you confirm "Figure 1: GC-MS spectrum of detected bioactive compounds in VRPO extract”? That is the same as Figure 2. I guess Fig 1 represents the data of VRSO, not VRPO. In the title of "Figure 4: Results of VRPO on cognitive mapping and memory impairment in the MWM task” and “Table 7: Results of VRPO on motor, exploratory, and anxiety-like behaviors in open field tasks”, VRSO seems to be needed in the title as well. The title "Figure 9: Effectiveness of VRPO and VRSO in wire hanging task" and the data in Figure 9 seems not to match. In Table 10: Effect of VRPO and VRSO on neurotransmitters, "ug/ug" looks like too much. Was there any change in the condition of the base animals? In Figure 11: Effects of VRPO and VRSO on protein expression of interleukin-6 (IL-6) and tumor necrosis factor-alpha (TNF-alpha), the content of cytokine seems like too high for the normative group. Lastly, there are some sentences that are missing citations and typographical errors, please include and correct them. Thank you for your cooperation.</additional> Reviewer #3: Title: “Vigna radiata Extracts in Pumpkin and Soya Bean Oil: A Novel Therapeutic Approach for Alzheimer's disease” This study investigates the neuroprotective effect of V. radiate pumpkin and soya bean oil extract in motor dysfunction and mental cognitive decline in Alzheimer’s disease (AD) rat model. The subject is interesting and address important issue. The research design is sound, well conducted, and the manuscript may be suitable for publication after major modifications. Some points of concerns are listed below: Introduction: -Some abbreviations are mentioned without their full name such as NFTs, no list of abbreviations is provided. Material and methods: -It is stated that “Animals of either sex, mice (25-30 g) or rats (150-200 g), were taken…”. Which type of animals used in study & what number in each group? -It is stated that “AD was induced in experimental animals through oral administration of aluminum chloride and d-galactose at a dose of 150 mg/kg each for 28 days”. Is this dose is given to animals daily or once only during this study period? -The dosage of drug treatment to various experimental groups is not clear. Are the drugs given every day or once during study? Is this treatment before, with or after induction of AD? -A lot of neurobehavioral tests were used in the study without specific rational or relation to the AD symptoms. -In Biochemical analysis of oxidative stress molecular markers and for chemical transmitters of brain, Which area of brain is used or whole brain homogenate is used? -In Histopathological analysis, which area of brain is processed and used for histopathological examination? -Also, in PCR amplification, the gene expressions are tested in which area of the brain? -In ELISA test, the quantities of proinflammatory cytokines were assessed in serum or in brain tissue? Results: -It is stated that “It was manifested that in AD like phenotype group the level of catalases, malonaldehyde, reduced glutathione and GPx remarkably lessened” The level of malondialdehyde is elevated, this need to be revised and corrected as shown in table 9. -It is stated that “Effect of VRPO and VRSO on acetyl cholinesterase” shown in (Figure 9). But, Figure 9: Effect of VRPO and VRSO on wire hanging task -The Effect of VRPO and VRSO on histopathology of brain tissues is assessed by subjective observation without any grading or scoring system for pathological lesions. Discussion and conclusion: The discussion includes many broad and vague terms with generalization, instead of concentrating on specific interpretation of the results. There is a lot of redundancy and repetition in many parts with overshooting conclusions. -Some sentences are confusing and difficult to understand for example: “VRSO and VRSPO downregulated the mRNA expression of neuronal deteriorating and neuroinflammatory markers in RT-PCR analysis. Please revise and clarify. -The whole manuscript should be revised for some typing and grammar corrections. References: Some references are deficient with missing data such as references 5, 16, 19. Please revise. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy . Reviewer #1: No Reviewer #2: No Reviewer #3: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . 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| Revision 1 |
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Vigna radiata Extracts in Pumpkin and Soya Bean Oil: A Novel Therapeutic Approach for Alzheimer's disease PONE-D-24-45075R1 Dear Dr. Bukhari, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Vara Prasad Saka Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #3: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #3: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #3: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #3: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #3: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #3: Thanks to the authors for addressing the comments of reviewers in the revised manuscript that became suitable for publication ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy . Reviewer #3: No ********** |
| Formally Accepted |
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PONE-D-24-45075R1 PLOS ONE Dear Dr. Bukhari, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Vara Prasad Saka Academic Editor PLOS ONE |
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