Peer Review History

Original SubmissionAugust 1, 2024
Decision Letter - Taimoor Hassan Farooq, Editor

PONE-D-24-32483Stable Isotopes as a Predictor for Organic or Conventional Classification of Berries and VegetablesPLOS ONE

Dear Dr. Zhu-Barker,

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Kind regards,

Taimoor Hassan Farooq

Academic Editor

PLOS ONE

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“The study was supported by the J.G. Boswell Endowed Chair in Soil Science, the Wisconsin Dairy Innovation Hub, and the Office of the Vice Chancellor for Research and Graduate Education at the University of Wisconsin-Madison with funding from the Wisconsin Alumni Research Foundation. We thank Eshan R. Toosi and Martin Burger for their comments on earlier versions of this manuscript”

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Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

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2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

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3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

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4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

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5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The manuscript is well-designed and well-prepared. only some comments in the attached reviewed manuscript.

Also the manuscript could be very benefits from an English editing to improve the flow of the text and rephrasing some sentences

Reviewer #2: Dear Authors,

Thank you for the opportunity to contribute to your work as a reviewer. This study aims to introduce a methodology for the differentiation of organic and non-organic produces with the quantification of N stable isotopes. The experiment is well designed and the results are visualized in an understandable way. However, clarifications needed when interpreting the results, and there is space for further explanations.

General comments

1. It is a common misbelief, that organic farming is organic just because of the fact, that the farmers do not use chemicals. Instead, it is organic, because the certification body says, based on the regulatory background, that it is organic. Therefore, it is not clear, what the sentence in line 19 is about – please revise. Also, it would be useful to add a clarifying sentence about the USDA/EU regulatory background on organics.

2. Regarding the collection of samples, it is unclear for me, when did the authors purchased the vegetables and berries. It is reported, that it took a whole year, but no information is available about the exact time or the production system those were grown. All of the samples were grown on genuine soil? Were those from uncontrolled/controlled environment facilities, hydroponics, aeroponics, etc? Were those fresh or stored products? And, most importantly, within species, were those purchased in more or less the same time? Obviously, when comparing a CEA lettuce harvested in January and an open-field one harvested in October does not seem fair. At the same time, I would like to emphasize, that I do not doubt the results due to the high number of samples, but I find it important to add more general information about the origin of the produces (not detailed information one by one!) and clarifying the possible issues arising from that.

3. The Authors mention, that this method can be used to demonstrate unauthorized use of synthetic fertilizers in OF. What is the amount they think it is possible to detect the difference between OF and non-OF products? I am asking it as the results showed, that the most robust difference was found in the case of lettuce, which is known to be produced with the use of high doses of synthetic fertilizer in conventional farming, therefore the difference can be high comparing with OF.

4. I am unsure whether the differentiation is about OF versus non-OF, as the farmer should not be a certified organic farmer for the use of manure or compost. Again, organic is about the certification provided by the authorization body. The authors might want to deal briefly with this question in the ms. Additionally, as the breakdown products of any chemicals used in the field remain in the soil and might travel with soil water, OF produces can also be polluted with these materials, without breaking the regulation, especially in areas where heavy agrochemization is an issue.

Detailed comments

line 13: significantly?

line 47: What about the EU? Or add: For example, (…)

line 49: It is not the certification process, that leads to higher production costs, but the exclusion of cheap agrochemicals. Please revise.

line 54: Revise the sentence starting with “This prohibition …

line 84-85: Revise.

line 120: Please use complete scientific names, or at least add sp.

line 263: Was that romaine lettuce, or any type of lettuce? Clarify throughout the whole ms.

line 269: ’Company’ within inverted commas?

line 295: There are several factors besides climate and soil conditions, that counts, please add more.

line 307: Slovenian?

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Reviewer #1: No

Reviewer #2: No

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Attachments
Attachment
Submitted filename: Organic_Integrity_MS_Final_no figs.docx
Revision 1

We have uploaded a revised manuscript with track changes along with a manuscript with no-change tracking that takes into consideration the reviewer comments which we found to be constructive and helpful. We have also uploaded a response letter that detailed our point-by-point responses to the reviewers’ comments with references to line numbers in the revised version. Let me know if further information or modifications are needed.

We have also detailed our responses to Journal's requirements in the cover letter

Attachments
Attachment
Submitted filename: Responses to Reviewers.docx
Decision Letter - Taimoor Hassan Farooq, Editor

Stable Isotopes as a Predictor for Organic or Conventional Classification of Berries and Vegetables

PONE-D-24-32483R1

Dear Dr. Zhu-Barker,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

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If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Taimoor Hassan Farooq

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Dear authors,

I am pleased to inform you that your manuscript has been accepted for publication in PLOS One. After careful consideration and review, we are confident that your work will be a valuable contribution to the field.

Please ensure that all necessary revisions and final formatting are completed in accordance with the journal's guidelines.

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

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2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The author responded to all reviewer's comments. The manuscript can be accepted now if there no negative comments from other reviewers

Reviewer #2: Dear Authors, thank you for considering my suggestions for the improvement of the manuscript, I can accept all of your responses.

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7. PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy .

Reviewer #1: No

Reviewer #2: No

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Formally Accepted
Acceptance Letter - Taimoor Hassan Farooq, Editor

PONE-D-24-32483R1

PLOS ONE

Dear Dr. Zhu-Barker,

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team.

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PLOS ONE Editorial Office Staff

on behalf of

Taimoor Hassan Farooq

Academic Editor

PLOS ONE

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