Peer Review History
| Original SubmissionJune 26, 2024 |
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PONE-D-24-14299Syphilis Seroprevalence and Risk Factors Among First-Time Blood Donors in Brazil: A Comprehensive Repeated Cross-Sectional Analysis spanning a decadePLOS ONE Dear Dr. CORTEZ, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Both reviewers acknowledged the relevance and soundness of the reported study, making suggestions with the aim of further improving it. Please, attempt to amply incorporate the suggestions made. Please submit your revised manuscript by Oct 17 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. When completing the data availability statement of the submission form, you indicated that you will make your data available on acceptance. We strongly recommend all authors decide on a data sharing plan before acceptance, as the process can be lengthy and hold up publication timelines. Please note that, though access restrictions are acceptable now, your entire data will need to be made freely accessible if your manuscript is accepted for publication. This policy applies to all data except where public deposition would breach compliance with the protocol approved by your research ethics board. If you are unable to adhere to our open data policy, please kindly revise your statement to explain your reasoning and we will seek the editor's input on an exemption. Please be assured that, once you have provided your new statement, the assessment of your exemption will not hold up the peer review process. 3. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Introduction Add the reference [4] for “The incidence of acquired syphilis among adolescents (aged 13 to 19) has increased 2.2-fold between 2015 and 2021, according to recent data released in 2022” and remove it from the next sentence. In the sentence “Routine screening in Brazil includes serological tests for HIV, hepatitis B (HBV, both core antibodies [HBcAb] and surface antigen [HBsAg]), hepatitis C (HCV), human T-lymphotropic viruses (HTLV)-1 and -2, Trypanosoma cruzi (Chagas disease), and syphilis”, add “T. pallidum” before “syphilis” and put the latter within brackets, as you did for T. cruzi, to maintain consistency of listing the pathogens first and the diseases they cause second. Add “being” after “than” in “In the context of syphilis, the detection of antibodies through these treponemal methods signifies a history of exposure to the pathogen rather than indicative of an ongoing active syphilis infection [6]” or rephrase in another way. Statistical methods You say “To determine syphilis seroprevalence, the total number of syphilis-positive blood donors without any previous donation record was considered the numerator, with the total number of first-time blood donors with valid treponemal results being the denominator.” Did you consider calculating syphilis incidence for first-time donors by extrapolating from the repeat donor incidence – a method already used in transfusion risk research? The trouble with syphilis seroprevalence is that it cannot inform how recently the infection occurred. In contrast, incidence estimation with a person-year denominator goes directly at the heart of your research question on secular trends. Although you can infer syphilis incidence from sequential prevalence estimates, it is an indirect and less precise method as it lacks the infection recency parameter. Older donors had longer exposure to T. Pallidum, but you cannot tell at what age they acquired the infection from the prevalence data. For younger donors, this uncertainty is less acute, but it may still be years or even more than a decade apart between the infection and blood donation. This is something to be addressed in the discussion. “We excluded serology results as covariates to avoid the risk of multicollinearity” sounds odd. Why would rare co-infections, typically with HBV and/or HIV, induce collinearity? You say “Subsequently, model comparisons were conducted using an Analysis of Variance (ANOVA) to test the significance of the added interaction term, with a p-value threshold of 0.05”, but it seems at odds with Poisson regression mentioned earlier. Was it a post-hoc regression analysis or was the term included in the regression model? Can you write down the equation? Which software did you use? Results Define the algorithm for “valid serological results for syphilis”. The donors with either treponemic or non-treponemic test results were discarded from the statistical analysis; if so, how different were their sociodemographic characteristics and serologic testing results from those included in the study? In Table 2, the phrase “Estimates of Syphilis Seroprevalence Rates” should drop the word “Rates” because it implies a person-time denominator, which was not used here. In Table 3, “ref.” should be substituted by “1.00”. Although the value is implied in the seroprevalence ratio description, it is better to state it explicitly than to keep some readers guessing. “Predicted Syphilis Seroprevalences” in Figure 4 are Poisson model-based marginal means or proportions? It is unclear to me what was meant by “According to the model, despite Figure 4, there is an increase in prevalence among persons aged 18–34”. Why “despite Figure 4”? Also, you say “The decrease in overall prevalence in recent years is to be attributed to the decline in older strata”, and I suppose this means that the older age groups reduced their prevalence over time as opposed to the younger blood donors. Please clarify and rephrase. Discussion In the reference [8], the overall syphilis seroprevalence was 0.14%, not 0.13% as reported in the present study. More importantly, the prevalence was 0.19% among the first-time donors, so this is the value directly comparable with the present study prevalence. This is important in light of your statement “A possible explanation for the higher prevalence in our analysis is that we only considered first-time donors, thus reducing the selection bias and dilution effect of including repeat donors, as only seronegative blood donors would be invited to donate again.” Other southern Brazilian states (e.g. Paraná) also reported lower syphilis seroprevalence among first-time blood donors [8], so systematic regional variations may be a more plausible explanation. Also, the two-step blood screening that starts with a treponemal test, followed by a non-treponemal test, hugely reduced false positive donor deferral in Brazil, thus reducing the “dilution effect of including repeat donors” (Baião A. et al. in Transfusion Medicine 2014; 24(1):64-66, doi: 10.1111/tme.12095). Resuming, a more thorough discussion of alternative explanations is due. Age-by-sex secular trends, adjusted for other covariates in multivariable Poisson regression, should be added to better understand how and for whom these trends are changing over time. This is equivalent to adding sex to the interaction term or just a post-hoc regression analysis of marginal means for the age-by-sex groups. The inclusion of only first-time blood donors in statistical analysis was considered a “notable strength” by the authors. However, it has many drawbacks in comparison with incidence estimation, already mentioned in my comments on statistical methods. Although the incidence estimation methods for first-time donors have their caveats, they rest on solid statistical principles, like so-called raking. I could not find sufficient arguments for favoring serial prevalence over incidence in the present study, nor did I see why first-time donors would be “a more reliable sentinel surveillance group for what might happen epidemiologically in the general population [21].” Behavioral factors are hugely important in motivating people to donate blood and hold the key to the understanding of donor candidate (auto)selection. Resuming, I suggest a better elaboration of the arguments stated for the cited recommendation. Reviewer #2: The study was conducted with rigor, utilizing a repeated cross-sectional and multicenter design, which allowed for the collection of data from a large sample of blood donors over a significant period (2007-2020). The inclusion of over 1.4 million first-time donors strengthens the robustness of the data. The use of multivariate Poisson models, including interaction terms, demonstrates an advanced and appropriate statistical approach to analyze syphilis seroprevalence and identify associated risk factors. The comparison of models using ANOVA reinforces the validity of the analyses. The conclusions are drawn from the presented data, such as the increase in syphilis prevalence among younger donors, particularly those born after 1990, indicating a concerning trend that requires continuous surveillance. Overall, the manuscript meets the criteria for technically sound scientific research, with data that adequately support the conclusions. Yes, the statistical analysis was performed appropriately and rigorously. The study utilized multivariate Poisson models, which are suitable for analyzing syphilis seroprevalence and identifying associated risk factors. The inclusion of interaction terms, such as between age group and donation year, adds depth to the analysis and allows for a more nuanced interpretation of trends over time. Furthermore, the model comparisons using ANOVA to evaluate the significance of these interaction effects demonstrate a rigorous approach. The improvement in the adjusted R² from 0.10 to 0.11 and the associated p-value of less than 0.001 reflect the robustness of the statistical analysis. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Emil Kupek Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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Syphilis Seroprevalence and Risk Factors Among First-Time Blood Donors in Brazil: A Comprehensive Repeated Cross-Sectional Analysis spanning a decade PONE-D-24-14299R1 Dear Dr. CORTEZ, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Albert Schriefer, M.D., Ph.D. Section Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The manuscript is now greatly improved and I am satisfied that the necessary modifications have been made. I have two additional suggestions that I consider nonessential, but could improve a reader’s understanding of the paper. In the penultimate sentence of the methods, you say “…the detection of antibodies … signifies a history of exposure to the pathogen rather than being indicative of an ongoing active syphilis infection." However, in Table 1 you presented about ten times higher syphilis compared with T. cruzi prevalence, without specifying whether you meant infection or disease. The latter starts with infection but CLIA-positive test results alone cannot distinguish between active infection, past infection, or symptomatic disease. Please clarify under Table 1 what is the difference between the “Syphilis” and T. cruzi rows. Which of the two represents a CMIA-positive test result? On Figure 2, vertical axis should add “%” to define the scale. Also, “year of visit” was in fact the year of blood donation. There are many other reasons to visit a blood bank but it is the donation that really matters here. It would be a better phrase to use throughout the text, too. Reviewer #2: The manuscript is clear, well-structured, and scientifically grounded. It presents a balanced discussion, highlighting both the strengths and limitations of the study. The recommendations based on the findings reinforce the practical utility of the research in enhancing epidemiological surveillance and planning public health interventions. I recommend the publication of the manuscript, considering its high relevance, methodological rigor, and significant contribution to understanding the epidemiology of syphilis in Brazil. This is a high-quality study that can positively impact the formulation of health policies and screening programs at a national level. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Emil Kupek Reviewer #2: No ********** |
| Formally Accepted |
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PONE-D-24-14299R1 PLOS ONE Dear Dr. CORTEZ, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Albert Schriefer Section Editor PLOS ONE |
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