Peer Review History
| Original SubmissionJanuary 4, 2024 |
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PONE-D-23-43806Relationship between serum anion gap and acute kidney injury in patients with acute pancreatitis upon admission: a retrospective study based on MIMIC-IV databasePLOS ONE Dear Dr. li, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Jul 07 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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You also have the option of uploading the data as Supporting Information files, but we would recommend depositing data directly to a data repository if possible. We will update your Data Availability statement on your behalf to reflect the information you provide. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: No ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: In this retrospective study conducted in 400 critically ill patients admitted to the ICU for severe acute pancreatitis (AP), whose data were extracted from a large institutional database, the Author investigated the association of serum anion gap (SAG) with the development of acute kidney injury (AKI) within 48 hours since admission. After adjusting for several potential confounders, they found that SAG had a nonlinear association with the odds of AKI, and that SAG values > 16 mmol/L were associated with significantly higher odds of AKI compared with patients having SAG values < 16 mmol/L. They conclude that SAG is a useful biomarker that could be used to identify patients with AP at highest risk of developing AKI, and that it could also be used to monitor the progression of AKI in these patients. I have several comments: 1) Because SAG had clearly a nonlinear association with the odds of AKI, patients should have been partitioned into SAG tertiles rather than using an arbitrary cut-off point at 16 mmol/L. The association with AKI could have been explored at multivariable analysis taking the lowest SAG tertile as a reference 2) Albumin-corrected SAG should have been used for all analyses, as it is conceivable that most of the enrolled patients, especially those with most severe clinical conditions at ICU admission, had low serum albumin levels. Hence SAG may have been underestimated in a non-uniform fashion in this population 3) In the same line of reasoning, because the degree of metabolic acidosis was more severe in more severe patients, additional adjustment for plasma bicarbonate is also advisable (see for instance ref #32 in the manuscript) 4) I believe that, because this study was conducted in critically ill patients, adjustment for SAPS II score at admission would have been preferable to adjusting for chronic comorbidities 5) As maximum SAG recorded within 24 hours since ICU admission was taken as the exposure measure in this study, an important limitation that should be acknowledged is that the effect of different volume and type (i.e., different chloride concentration) of resuscitation fluids administered within 24 hours, which represents an important confounding factor 6) In the Introduction section (page 5, lines 70-72) the Authors state “Prior research has shown a potential correlation between elevated AG levels and AKI in certain medical contexts, including sepsis and diabetic ketoacidosis”. This sentence is not strictly relevant to the aim of the study, and should be deleted 7) In the Discussion section (pag. 12, lines 240-244, the Authors state “Continuous AG measurement can provide valuable information on the progression of AKI, helping to intervene in a timely manner and develop personalized treatment plans. Secondly, incorporating AG measurement into the existing AKI prediction model maybe improve its accuracy and predictive ability in predicting AP patients”. These conclusion are not supported by the results, and should be deleted. The conclusions must be more nuanced, especially given the fact that the retrospective design of the study prevents establishing causation. 8) The English language throughout the text of the manuscript should be extensively edited by a native English-speaking person Minor points 1) The term “association” should be used in lieu of “correlation” throughout the text 2) In the Methods section (page 6, line 97) what do the Authors mean by “not having sufficient data on AP”? Please explain in more details 3) In the Statistics section (page 7, line 130) the Authors mention that “several interpolation methods” were employed for variables with <10% missing data. Please, explain in more details which were the specific interpolation techniques that were used 4) Page 7, line 133: please change “logical” to “logistic” Reviewer #2: Relationship between serum anion gap and acute kidney injury in patients with acute pancreatitis upon admission: a retrospective study based on MIMIC-IV database Review 1. The authors herein presented a good paper shedding light on the association between the old age indicator for acute kidney injury (AKI) and serum anion gap (AP) and its correlation in acute pancreatitis (AP). The authors conclude that AG has a correlation with the incidence of AKI in AP patients admitted to the clinics within 48 hours. 2. Inasmuch as the authors have made a significant point that is worth considering in clinical practice in the monitoring of the risk of AP to the development of AKI, albeit my recommendations for improvement. 3. Firstly, the title could be revised to accurately reflect the time point of the investigation and the application of AG in AP-induced AKI. From the analysis, AG values were considered relevant only after 48 hours after admission, which suggests that AG may be relevant only at this time point. This is because AG is not a static indicator and is highly subject to alterations due to medications or physiological or pathological conditions. Moreover, the first use of the abbreviation MIMIC-IV sends any reader to head-scratching, as one may not know what it is. It may be that the use of a single center study or the site of the study could be appropriate 4. Secondly, the abstract did not point to the real conclusion and value of the study apart from informing readers on the rationale of the study. It is important that abstracts tell the story and its conclusion to attract interest from readers. 5. Thirdly, although the authors focussed on AG, it would have been nicer and more convincing to attempt to explain step wisely the risk factors to AP and AKI, then later situate in the AG values relative to the AP clinical indicators and AKI measures of sCr and other markers of AKI. Of course, the authors have presented all in Table 1 that is sometimes cumbersome for readers. 6. Lastly, the authors should re-check the grammar and referencing as some statements are made without appropriate referencing. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: Yes: Adu Gyamfi Michael ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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PONE-D-23-43806R1Correlation between baseline anion gap and early acute kidney injury in patients with acute pancreatitis in the intensive care unit: a single-center retrospective cohort studyPLOS ONE Dear Dr. li, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Dec 30 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Keiko Hosohata, Ph.D. Academic Editor PLOS ONE [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #3: All comments have been addressed Reviewer #4: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #3: Yes Reviewer #4: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #3: Yes Reviewer #4: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #3: Yes Reviewer #4: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #3: Yes Reviewer #4: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #3: The authors answered all the questions addressed. Congratulations to all authors for the research. No more questions Reviewer #4: 1. Grammar has improved from prior submission, but a few corrections are still needed in terms of grammar eg. check flow diagram. 2. Since this is an adult only data, authors do not need to include "excluded participants age <18 years n=0" in the flow diagram. Instead, a sentence should be added to the methods that the population consists of individuals aged 18 years or older. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #3: Yes: Miguel Angelo Goes Reviewer #4: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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Correlation between baseline anion gap and early acute kidney injury in patients with acute pancreatitis in the intensive care unit: a single-center retrospective cohort study PONE-D-23-43806R2 Dear Dr. li, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Keiko Hosohata, Ph.D. Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-23-43806R2 PLOS ONE Dear Dr. Li, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr Keiko Hosohata Academic Editor PLOS ONE |
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