Peer Review History
| Original SubmissionMay 23, 2024 |
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PONE-D-24-20929Predictors of maternal HIV acquisition during pregnancy and lactation in sub-Saharan Africa: a systematic review and narrative synthesisPLOS ONE Dear Dr. Graybill, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Oct 24 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf. 2. Thank you for stating the following financial disclosure: [This study was funded by the National Institute of Allergy and Infectious Diseases (NIAID) through award R01 AI131060. Additional investigator, trainee, and administrative support was provided by NIAID (T32 AI007001, K24 AI120796, P30 AI050410, R01 AI157859), and the Fogarty International Center (D43 TW009340, D43 TW010558).]. Please state what role the funders took in the study. If the funders had no role, please state: ""The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."" If this statement is not correct you must amend it as needed. Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf. 3. Thank you for stating the following in the Competing Interests section: [Drs. Graybill and Chi received consulting fees from UNICEF. All other authors reported no conflicts of interest.]. Please confirm that this does not alter your adherence to all PLOS ONE policies on sharing data and materials, by including the following statement: ""This does not alter our adherence to PLOS ONE policies on sharing data and materials.” (as detailed online in our guide for authors http://journals.plos.org/plosone/s/competing-interests). If there are restrictions on sharing of data and/or materials, please state these. Please note that we cannot proceed with consideration of your article until this information has been declared. Please include your updated Competing Interests statement in your cover letter; we will change the online submission form on your behalf. 4. As required by our policy on Data Availability, please ensure your manuscript or supplementary information includes the following: A numbered table of all studies identified in the literature search, including those that were excluded from the analyses. For every excluded study, the table should list the reason(s) for exclusion. If any of the included studies are unpublished, include a link (URL) to the primary source or detailed information about how the content can be accessed. A table of all data extracted from the primary research sources for the systematic review and/or meta-analysis. The table must include the following information for each study: Name of data extractors and date of data extraction Confirmation that the study was eligible to be included in the review. All data extracted from each study for the reported systematic review and/or meta-analysis that would be needed to replicate your analyses. If data or supporting information were obtained from another source (e.g. correspondence with the author of the original research article), please provide the source of data and dates on which the data/information were obtained by your research group. If applicable for your analysis, a table showing the completed risk of bias and quality/certainty assessments for each study or outcome. Please ensure this is provided for each domain or parameter assessed. For example, if you used the Cochrane risk-of-bias tool for randomized trials, provide answers to each of the signalling questions for each study. If you used GRADE to assess certainty of evidence, provide judgements about each of the quality of evidence factor. This should be provided for each outcome. An explanation of how missing data were handled. This information can be included in the main text, supplementary information, or relevant data repository. Please note that providing these underlying data is a requirement for publication in this journal, and if these data are not provided your manuscript might be rejected. 5. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Additional Editor Comments: Dear Authors, Thank you for submitting your manuscript titled “Predictors of maternal HIV acquisition during pregnancy and lactation in sub-Saharan Africa: a systematic review and narrative synthesis” for review. . Below are my comments that you might address or clarify, which I hope will assist you in enhancing the manuscript. 1. Methodological Concerns 1.1 Heterogeneity in Predictor Definitions There is considerable variability in how key predictors (e.g., STIs, condom use, multiple partners) were defined across the included studies. The manuscript acknowledges this variability but does not address how it impacts the overall interpretation of results. Consider providing a more robust discussion on how the varying definitions of predictors could have influenced your findings. A sensitivity analysis or stratified synthesis, where you group studies based on the homogeneity of predictor definitions, would add rigor to your approach. 1.2 Exclusion of Predictors Assessed in Fewer Than Four Studies Excluding predictors evaluated in fewer than four studies may result in the omission of important but less-studied risk factors. Recommendation: Provide a brief discussion of the predictors that were excluded and highlight any that may be emerging as important in other contexts or regions. If possible, explore these predictors narratively, even if formal synthesis was not feasible. 1.3 Limited Consideration of Confounders The manuscript lacks adequate discussion of how confounding variables (e.g., socioeconomic status, healthcare access) were addressed in the included studies. Add a section that categorizes how well the included studies adjusted for key confounders. Where confounding was not properly addressed, note how this limitation could affect the interpretation of the findings. This is particularly important for predictors like age and multiple partners, where social and healthcare access factors might play a significant role. 2. Presentation of Data and Interpretation of Results 2.1 Confidence Intervals and Precision Many associations are reported without sufficient emphasis on the confidence limit ratios (CLRs) or the wide confidence intervals seen in certain predictors, which could indicate high imprecision. Place greater emphasis on the interpretation of these confidence intervals and discuss how imprecision affects the reliability of the findings. If the CLRs indicate high variability, it would be important to highlight this as a limitation in your results. 2.2 Interpretation of Unexpected Findings (e.g., Condom Use) The finding that consistent condom use is associated with a higher risk of HIV acquisition is counterintuitive and requires a deeper exploration of potential biases or alternative explanations. Acknowledge the potential for reporting biases or misclassification of condom use. It is also important to discuss whether consistent condom use is related to other confounding variables, such as higher sexual activity, which may explain the increased risk observed. 2.3 Underrepresentation of Regional Differences The exclusion of studies from Western Africa and non-English studies raises concerns about generalizability. Include a more detailed discussion of how this exclusion impacts the conclusions, particularly given the diverse healthcare and cultural contexts in sub-Saharan Africa 3. Discussion and Implications for Policy and Practice 3.1 Lack of Practical Implications for Healthcare Providers The manuscript focuses on identifying predictors but lacks specific recommendations for how these findings can be used in clinical practice or policy development. Strengthen the discussion by providing concrete suggestions for how healthcare providers in sub-Saharan Africa can use these predictors in clinical decision-making. For instance, how can HIV risk screening be adapted based on the predictors identified in your review? What are the implications for PrEP implementation or antenatal care protocols? 3.2 Policy Recommendations The current policy implications are underdeveloped and lack specificity. Provide a more detailed exploration of how your findings align with or challenge current WHO recommendations. You could also offer suggestions for regional or national health policies that could be adapted to better address the identified predictors of HIV acquisition. 4. Clarity and Organization 4.1 Consistency in Data Presentation Data presentation is sometimes inconsistent, particularly in terms of reporting confidence intervals and discussing effect sizes. Ensure that all data, especially confidence intervals, are consistently reported. This will help readers more easily assess the strength and precision of your findings. 5.1 Expansion of Limitations and Future Research Directions The limitations section is currently underdeveloped, particularly around the methodological choices made (e.g., vote counting, reliance on self-reported data). Expand the limitations section to address the methodological constraints, including the exclusion of certain predictors and the impact of self-reported data. Additionally, provide more specific future research directions, such as focusing on under-researched predictors or conducting more region-specific analyses. 6. Engagement with Current Literature 6.1 Integration with Recent Studies and Trends The manuscript does not sufficiently engage with recent advancements in HIV prevention, such as the growing use of PrEP or novel behavioral interventions. Incorporate a discussion on how PrEP, telehealth, and other modern interventions could interact with the predictors you identified. This would make the paper more relevant to current clinical and policy debates. Conclusion: I look forward to reviewing a revised version. Best regards, [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: N/A Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: This is a well-written systematic meta-review of literature from SSA regarding risk factors for HIV acquisition among pregnant and lactating women. It includes 3+ decades of literature and identifies a common set of risk factors associated with HIV acquisition during pregnancy and lactation. The authors undergo a robust critique of the included manuscripts and draw measured conclusions about the common factors identified. Background: Would include brief discussion of why women are at particular risk of HIV during pregnancy and lactation. (social/family factors, biology/immunologic factors) Mofesen 2018 might be helpful here. Would also include a brief context of the epidemiology of HIV acquisition among PLW in SSA. Methods: Initially your wide date range for inclusion struck me as a limitation—how relevant could studies of HIV acquisition risk in the late 80’s be for this analysis?—but ultimately the data convinced me in that the same themes emerged throughout the 30+ years you included. I think you would draw the same conclusions from a more narrow, homogeneous time period though I agree that the consistency of the themes over that period actually end up adding validity to your conclusion. Results: The tables are clear and helpful. Discussion: 458-60: It was unclear to me what you meant by this sentence. 466: Can you say more here about current performance of the risk assessment tools you mention—either specifically more about the Kenya tool or provide an additional example? The discussion of risk factors is nuanced but I am left without a clear sense of how these findings could augment current practice. Reviewer #2: The authors did an excellent job of synthesizing the diverse and broad range of published individual risk factors for acquiring HIV during pregnancy and lactation, using the standard PRISMA guidelines for systematic review. The authors struck a good balance of providing the diversity of various risk factor definitions and risk periods and distilling these definitions to meaningful categories. In discrete datasets, the analytic approach is generally to identify risk factors significantly associated with incident HIV and then to perform a multiple regression analysis to identify the subset of factors that remain independently associated with HIV incidence, since risk factors can confound the individual associations. The authors acknowledge this possibility in the Discussion (lines 455-457) by noting that the association between condom use and HIV infection could be confounded by other risk factors such as multiple sexual partners or having a partner living with untreated HIV. The diversity of type and definition of predictors precluded meta-analysis; however, I think that the discussion could have benefitted from a more robust discussion on the interplay between different risk factors and how to deal analytically with confounders in a risk scoring system- it's not just an issue of understanding that association does not mean causation (lines 491-2). The authors mention that some risk factors are self-reported. People might not be completely transparent about socially stigmatizing risks, and as noted, risks can be transitory. There has been a recent shift in prevention to deemphasize risk screening tools and instead provide prevention methods based on self-perceived risk, which the authors note was consistently associated with maternal HIV acquisition. Table 2 shows a moderate to high risk of bias in the publications. Given these limitations, in the discussion, I encourage you to reflect on the advantages/ disadvantages of a universal vs risk-based approach as trialed in the PrIMA study by Kinuthia, J., et al. (2023). "Risk-based versus universal PrEP delivery during pregnancy: a cluster randomized trial in Western Kenya from 2018 to 2019." J Int AIDS Soc 26(2): e26061. I realize this universal offer approach undermines the premise of this systematic review; however, it is a pragmatic alternative approach that could be acknowledged in the limitations. Another angle on the differences between studies is who was asking the risk questions and where. Participants might be more willing to be accurate (or honest) in certain circumstances (private location) and to certain interviewers. Specific minor points are that the legend in Figure 2 (page 50-54) are small and difficult to read, which makes it difficult to grasp what variable the forest plots are trying to show. You had a clear rationale for selecting risk factors that were assessed in at least 4 publications. That's an okay rationale - you had to limit in some way: however, I might have weighted the large studies (Dihn, Humphrey, Mussa, Woldesenbet) with many seroconversions that assessed risk factors (such as age difference) that didn't quite make the 4 study mark. (again, a minor issue) ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: Yes: Wm. Perry Killam ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Predictors of maternal HIV acquisition during pregnancy and lactation in sub-Saharan Africa: a systematic review and narrative synthesis PONE-D-24-20929R1 Dear Dr. Graybill, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. 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If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: N/A Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Appreciate your responses to my particular comments, as well as the comments by the other reviewer. This is a comprehensive meta-analysis of literature, though agree with the other review that an update will be imminently needed in light of some of the recent advances in PrEP provision among PBFW in sub-Saharan Africa. Reviewer #2: Thank you for responding to our comments. I think this is now a stronger paper, and I recommend that PLOS One accept it. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: Yes: Wm. Perry Killam ********** |
| Formally Accepted |
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PONE-D-24-20929R1 PLOS ONE Dear Dr. Graybill, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Garumma Tolu Feyissa Academic Editor PLOS ONE |
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