Peer Review History
| Original SubmissionSeptember 20, 2024 |
|---|
|
PONE-D-24-41657Fighting for Favour: Sexual Dimorphism and Symmetry in the Hydrothermal Vent and Methane Seep Endemic Yeti Crabs (Kiwaidae).PLOS ONE Dear Dr. Christopher Nicolai Roterman, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Overall the manuscript is well written. However, some major issues only with the methodology which with appropriate changes I think the manuscript could be accepted. Please submit your revised manuscript by Nov 24 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Murtada D. Naser Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. We noted in your submission details that a portion of your manuscript may have been presented or published elsewhere. [One component of the research was originally published in another research paper by Azofeifa-Solano et al. 2022. In our study we have re-analysed the data they published using an updated methodology.] Please clarify whether this [conference proceeding or publication] was peer-reviewed and formally published. If this work was previously peer-reviewed and published, in the cover letter please provide the reason that this work does not constitute dual publication and should be included in the current manuscript. 3. We note that Figure 4 in your submission contain [map/satellite] images which may be copyrighted. All PLOS content is published under the Creative Commons Attribution License (CC BY 4.0), which means that the manuscript, images, and Supporting Information files will be freely available online, and any third party is permitted to access, download, copy, distribute, and use these materials in any way, even commercially, with proper attribution. For these reasons, we cannot publish previously copyrighted maps or satellite images created using proprietary data, such as Google software (Google Maps, Street View, and Earth). For more information, see our copyright guidelines: http://journals.plos.org/plosone/s/licenses-and-copyright. We require you to either (1) present written permission from the copyright holder to publish these figures specifically under the CC BY 4.0 license, or (2) remove the figures from your submission: a. You may seek permission from the original copyright holder of Figure 4 to publish the content specifically under the CC BY 4.0 license. We recommend that you contact the original copyright holder with the Content Permission Form (http://journals.plos.org/plosone/s/file?id=7c09/content-permission-form.pdf) and the following text: “I request permission for the open-access journal PLOS ONE to publish XXX under the Creative Commons Attribution License (CCAL) CC BY 4.0 (http://creativecommons.org/licenses/by/4.0/). Please be aware that this license allows unrestricted use and distribution, even commercially, by third parties. Please reply and provide explicit written permission to publish XXX under a CC BY license and complete the attached form.” Please upload the completed Content Permission Form or other proof of granted permissions as an "Other" file with your submission. In the figure caption of the copyrighted figure, please include the following text: “Reprinted from [ref] under a CC BY license, with permission from [name of publisher], original copyright [original copyright year].” b.) If you are unable to obtain permission from the original copyright holder to publish these figures under the CC BY 4.0 license or if the copyright holder’s requirements are incompatible with the CC BY 4.0 license, please either i) remove the figure or ii) supply a replacement figure that complies with the CC BY 4.0 license. Please check copyright information on all replacement figures and update the figure caption with source information. If applicable, please specify in the figure caption text when a figure is similar but not identical to the original image and is therefore for illustrative purposes only. The following resources for replacing copyrighted map figures may be helpful: USGS National Map Viewer (public domain): http://viewer.nationalmap.gov/viewer/ The Gateway to Astronaut Photography of Earth (public domain): http://eol.jsc.nasa.gov/sseop/clickmap/ Maps at the CIA (public domain): https://www.cia.gov/library/publications/the-world-factbook/index.html and https://www.cia.gov/library/publications/cia-maps-publications/index.html NASA Earth Observatory (public domain): http://earthobservatory.nasa.gov/ Landsat: http://landsat.visibleearth.nasa.gov/ USGS EROS (Earth Resources Observatory and Science (EROS) Center) (public domain): http://eros.usgs.gov/# Natural Earth (public domain): http://www.naturalearthdata.com/ [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: No Reviewer #3: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The present study is the first to show sexual dimorphism and symmetry of chelipeds in the Yeti crab Kiwa tyleri, endemic to hydrothermal vents and methane seeps. In addition, the authors re-analysed the allometric growth of chelipeds in another Yeti crab, Kiwa puravida, from published data and discussed interspecific differences in cheliped morphometry and functions. The manuscript is well written and will add new biological information on deep-sea Yeti crabs. Please consider the following minor comments. Title: Please include the term "cheliped" or "claw" in the title. L81-82. Please provide the scientific name for each Yeti crab photo. L195. Does this require Bonferroni correction? Test for asymmetry index between sexes and laterality of chelae are independent. L211-212. Again, is Bonferroni correction needed? You can use the 10 models shown in Table 2, but you estimated 40 coefficients including the intercept for 10 models. If you use the Bonferroni correction, you should adjust the p-values taking into account the number of parameter estimates. I do not think the Bonferroni correction is necessary for allometric growth analyses. Reviewer #2: The manuscript in general is well written and brings important information on yeti crabs’ biology. I have some major issues with the methodology. The rest of the manuscript I have only minor suggestions. Title: suppress “Fighting for favour” because there’s not enough evidence the all the analyzed species actually fight. Introduction: The introduction section is well constructed around these topics, however, to ensure a better readability I suggest removing these topics headings to create a continuous coherent text. Line 60: remove “chirostyloid” or add somewhere before that these crabs belong to the Chirostyloidea superfamily. Line 66: Figure1 � I suggest using only images of the species used the manuscript, and, if possible, pictures taken by the authors and not from some other publications. Line 68: What SWIR means ? It is some sort of indication of the undescribed species mentioned earlier ? Clarify it. Line 71: Remove figure 2 from the manuscript. M&M Line 152: JC080 – 02 December 2012 to 30 December 2010 ? Is this correct ? Line 155: I guess here is Figure 4 ? Line 163: Please explain “Kiwaids were not systematically or randomly sampled”. It is random or nor ? If it is random than they are not systematically sampled. Line 173: Measurements: Why did the authors took those measurements ? The propodus length/height is understandable, but, the authors should explain why it was chosen.However, the carpus is not widely used in relative growth analysis. Thus, the authors should explain why the carpus was measured. The carpus has any biological/behavioral significance for the crabs ? Line 175: Change “body parts” to “structures”. Change this throughout the text. Line 181: distil ? or distal ? Lines 200 – 212: The relative growth analysis here proposed are quite confusing. It is widely known that chelae x carapace relationships (and others) in crustaceans are not linear. In fact, it often assume an power function distribution and that’s why it is logarithmic transformed in these kind of studies. Please see: Huxley, J. S. (1950). Relative Growth and Form Transformation. Royal Society of London, 137(889), 465–469. Huxley, J. S., & Teissier, G. (1936). Terminology of Relative Growth. Nature. Hartnoll, R. G. G. (1978). The Determination of Relative Growth in Crustacea. Crustaceana, 34(3), 281–293. Hartnoll, R. G. (1974). Variation in Growth Pattern between Some Secondary Sexual Characters in Crabs ( Decapoda Brachyura ). Crustaceana, 27(2), 131–136. Hartnoll, R. G. (2001). Growth in Crustacea – twenty years on. Hydrobiologia, 449, 111–122. These studies should provide a comprehensive knowledge on basic relationships in crustaceans’ relative growth. Thus, using linear models (e.g linear regression) is a correct choice of analysis, however, there is some catch here. For bivariate relative growth, the residuals are important and a simple linear regression might sometimes provide a not accurate model. Thus, my suggestion is to change the analysis to the type II linear regression (major axis analysis) which are more accurate. This can be easily performed using the SMATr package built for R. For a comprehensive discussion on bivariate allometric fitting lines please read: Warton, D. I., Wright, I. J., Falster, D. S., & Westoby, M. (2006). Bivariate line-fitting methods for allometry. Biological Reviews of the Cambridge Philosophical Society, 81(2), 259–291. https://doi.org/10.1017/S1464793106007007 Warton, D. I., Duursma, R. A., Falster, D. S., & Taskinen, S. (2012). smatr 3- an R package for estimation and inference about allometric lines. Methods in Ecology and Evolution, 3(2), 257–259. https://doi.org/10.1111/j.2041-210X.2011.00153.x Lines 213-217: During the re-analysis of K. puravida, it was not considered the carpus measures ? Why ? Then, why did the authors chose carpus measures for K. tyleri ? Lines 217-220: The thankful note should be on the acknowledgement section. Results Lines 225-226: add the standard deviation with the mean values. Lines 227 – 228: Why mention that the 10 largest specimens were male ? Remove. I suggest to add some sort of histogram by size classes for males and females to better represent and visualize their size distribution. Line 233: “For the propodus asymmetry index (AI), negative values indicate a left skew and positive valuesa right skew.” This information should be at the M&M section. Lines 252 – 275: See the comments for methodology on relative growth/allometry. Discussion: There’s a lack of discussion around the carpus relative growth which is explained by the lack of explanation of is use/importance during introduction and methodology sections. Add a discussion on carpus or remove it from the manuscript. Line 323: The authors suggest that K. tyleri may not employ carnivory, however, during introduction authors said that there are teeth and such on these crabs’ claws which suggested predatory behavior. Thus, the sentence here seems inconsistent. I believe that claws functions to push/pull and squeeze, thus the symmetry may not imply that they are not predators. If their prey is not hard/complex to acquire, thus, they don’t necessarily need a dimorphic high specialized claw. I suggest rethinking this sentence. Line 355: “difference may reflect sexual selection relating to male-male competition for females”. Since these animals are blind, doesn’t seem feasible a male-male competition for female since size may not matter if there is no visual signal, although, some experiments could be done in this matter, which I personally think would be great! Thus, this difference may be related to differential energy usage. Males are often found close to the vents which in turn may have access to more/better food, whilst females are found marginally. Also, males tend to allocate more energy towards growth than females. Females also use a lot of energy each reproductive cycle, directing its energy towards egg production and so on, which can hamper the chelipeds’ growth. Therefore, in this sentence, I suggest a discussion towards different energy allocation between sexes. Reviewer #3: The manuscript entitled "Fighting for Favour: Sexual Dimorphism and Symmetry in the Hydrothermal Vent and Methane Seep Endemic Yeti Crabs (Kiwaidae)" presents very robust and novel data for science. In addition, it uses data from a congeneric species for comparisons between these organisms, which deepened some discussions about the results. In my opinion, the article is very well written and deserves to be published. I recommend a minor review due to a few sections where I believe the text needs corrections or further discussion. The text has a deficiency related to meeting basic zoological nomenclature rules. There are several instances where species are mentioned without proper citation of scientific authorities. Moreover, throughout the text, species names are written in full, whereas they should be abbreviated after the first mention. Although these errors are consistent and repetitive, they are easy to resolve after a careful review by the authors. Once these issues are addressed, I believe the manuscript can be accepted. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
|
| Revision 1 |
|
Yeti Claws: Cheliped Sexual Dimorphism and Symmetry in Deep-Sea Yeti Crabs (Kiwaidae). PONE-D-24-41657R1 Dear Dr. Christopher Nicolai Roterman, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Murtada D. Naser Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
|
PONE-D-24-41657R1 PLOS ONE Dear Dr. Roterman, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Murtada D. Naser Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .