Peer Review History
| Original SubmissionJuly 17, 2024 |
|---|
|
PONE-D-24-29172Anatomical and Micro-CT measurement analysis of ocular volume and intraocular volume in adult Bama Miniature Pigs, New Zealand rabbits, and Sprague-Dawley ratsPLOS ONE Dear Dr. Li, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ============================== Based on the Reviewers` comment the current manuscript needs some minor revision. Please make a correction of the paper according to these suggestions. ============================== Please submit your revised manuscript by Oct 11 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Karolina Goździewska-Harłajczuk Academic Editor PLOS ONE Journal requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Thank you for stating the following financial disclosure: “2023 Research Fund of Aier Eye Research Institute(No.AEI202310LC01); Science Research Foundation of Aier Eye Hospital Group (No.AR2201D3).” Please state what role the funders took in the study. If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." If this statement is not correct you must amend it as needed. Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf. 3. Thank you for stating the following in the Acknowledgments Section of your manuscript: “Thanks to Aier Eye Group for its funding support; Thanks to WestChina-Frontier PharmaTech Co., Ltd. for providing laboratory facilities and animals for this study.” We note that you have provided funding information that is currently declared in your Funding Statement. However, funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows: “2023 Research Fund of Aier Eye Research Institute(No.AEI202310LC01); Science Research Foundation of Aier Eye Hospital Group (No.AR2201D3).” Please include your amended statements within your cover letter; we will change the online submission form on your behalf. 4. In the online submission form you indicate that your data is not available for proprietary reasons and have provided a contact point for accessing this data. Please note that your current contact point is a co-author on this manuscript. According to our Data Policy, the contact point must not be an author on the manuscript and must be an institutional contact, ideally not an individual. Please revise your data statement to a non-author institutional point of contact, such as a data access or ethics committee, and send this to us via return email. Please also include contact information for the third party organization, and please include the full citation of where the data can be found. 5. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Additional Editor Comments: Based on the Reviewers` comment the current manuscript needs some minor revision. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: I Don't Know ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The study aimed to measure the eyeball and its components in Bama Miniature Pigs, New Zealand rabbits, and Sprague-Dawley rats using micro-CT and anatomical techniques. They included six animals from each species and measured the volumes of the eyeball, anterior chamber, lens, and vitreous cavity. The conclusion was that combining micro-CT and anatomical measurements is effective for determining eyeball volumes in these animals. This information could be useful for future ophthalmology-related drug research. Reviewer #2: Review on the manuscript PONE-D-24-29172 Anatomical and Micro-CT measurement analysis of ocular volume and intraocular volume in adult Bama Miniature Pigs, New Zealand rabbits, and Sprague-Dawley rats Thanks very much for giving me such opportunity to revise the current manuscript. The manuscript describes the anatomical and micro-CT examination of the eye in Bama miniature pigs, New Zealand rabbits and Sprague-Dawley rats. The manuscript could be considered for publication. My main concern is that the study design is not clear, was it an in vivo or ex vivo or in vitro (as indicated by authors). It is not clear when animals really euthanized (before or after CT scan). If before scanning, how did the author maintain accuracy of measurements following euthanasia? Additionally, the method of euthanasia requires justification. Minor comments: Title: - Replace “Pig” with “pig”. Abstract: - You can report your results using 2 decimal points. Introduction: - Line 78: “Salguero R et al.”…replace with “Salguero et al.” - “length of each line in normal dog”….explain what do you mean by each line. Method: - Lone 89: “This is an in vitro experiment”…..Do you believe that this is an in vitro experiment?! ….. please replace by “ an in vivo study”. - Line 103: “The tool was then used to draw the ROI (region of interest)” could be replaced by “The tool was then used to draw the region of interest (ROI)” - Line 110: “All operations were performed by a single experimenter” … Do you mean “All CT scans and measurements were made by the same examiner (add Name abbreviations)?? ….Did you made measurements at the same time of examination or you made it on saved scans….please clarify. Did you make your measurements only one time or multiple times and get your mean for each eye measurements. - Line 111: Anatomical results/anatomic measurements all over the text could be replaced by “Gross volumetric estimation of ocular volume” - Line 112-113: - “intravenous injection of pentobarbital sodium (30mg/kg)” at which vein did you inject in each animal? - please add concentration, trade name, manufacturer and country of origin of the anesthetic drugs. - “all animals were euthanized through abdominal artery bleeding” ….Which abdominal artery? How did you approach it? What is your justification and reference for this method of euthanasia? How did you ensure euthanasia? Statistical analysis: - Did you consider running correlation and regression analysis to your measurements? Results: - Results could be presented using 2 decimal points. Discussion: - Line 162-163: “In our study, due to the large size of the pigs, in vivo, eye scanning could not be performed. In order to control the uniform conditions, ex vivo CT scanning was performed on the eyeballs of pigs, rabbits, and rats”…..this is really very confusing. For the first time here in the discussion section to include that you did not make your CT scans on life animals??!!! You have mentioned that animals were euthanized for the anatomic study not for the CT scans. Then how did you position the eyes balls for scanning? How did you manage post-mortem changes of ocular dimensions during scanning?? Please clarify in details. Line 173: you are suggesting that the micro-CT measurements are more reliable than anatomic measurements “we posit that CT measurement results may be more reliable”……So what was your study objective and hypothesis??!! What is your gold standard to judge/prove that micro CT is reliable in determination of volumetric eye measurement? Figures: - Figure 1: please add reference to panels a,b, c within “Figure caption”. You may need to include description of volumetric measurements in the CT scan. Thanks ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Rodrigo Pessoa Cavalcanti Lira Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
|
Anatomical and Micro-CT measurement analysis of ocular volume and intraocular volume in adult Bama Miniature pigs, New Zealand rabbits, and Sprague-Dawley rats PONE-D-24-29172R1 Dear Dr. Li, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Karolina Goździewska-Harłajczuk Academic Editor PLOS ONE Additional Editor Comments (optional): All comments of the Reviewers` were included in the revised version of the mauscript, thus the paper can be accept in current form. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #2: Thanks very much for giving me such opportunity to revise the current version of the manuscript. The manuscript was greatly improved compared to previous version. Authors are acknowledged for their efforts in responding to previous comments. The manuscript is acceptable for publication. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #2: Yes: Elham A. Hassan ********** |
| Formally Accepted |
|
PONE-D-24-29172R1 PLOS ONE Dear Dr. Li, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Karolina Goździewska-Harłajczuk Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .