Peer Review History

Original SubmissionMay 7, 2024
Decision Letter - Maria Santacà, Editor

PONE-D-24-17815Dual sensory impairments in companion dogs: prevalence and relationship to cognitive dysfunction.PLOS ONE

Dear Dr. Mowat,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. I have carefully read the manuscript which I find very interesting. I agree with the comments of the two reviewers that I think would improve the manuscript for readers. If you can attend to their points (expecially the problem with the validation of the questionnaires) I am confident I will be able to accept the manuscript.

Please submit your revised manuscript by Sep 13 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Maria Santacà

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at 

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

2. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match. 

When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section.

3. Thank you for stating the following financial disclosure: 

"This work was funded by the National Institutes of Health (K08EY028628, R01AG082907, P30EY016665), the Morris Animal Foundation Mark L. Morris Jr. Investigator Award (D23CA-510), donor funds to the UW-Madison Department of Ophthalmology and Visual Sciences, an unrestricted grant from Research to Prevent Blindness, Inc. to the UW-Madison Department of Ophthalmology and Visual Sciences, and the UW-Madison Women in Science and Engineering and Leadership Institute Vilas Life Cycle Professorship. "

Please state what role the funders took in the study.  If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." 

If this statement is not correct you must amend it as needed. 

Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The study assesses sensory and cognitive deficits in dogs using both physiological measurements (brainstem auditory evoked potential - BAEP and electroretinography - ERG) and questionnaire assessments. The authors implied at the very beginning that they would explain (make it understood) the relationship between sensory and cognitive function (l20-22: "Dog owners often describe impairments in multiple sensory functions, yet the relationships between sensory and cognitive function in older dogs are not well understood.") However, this explanation did not occur. What the reader received were correlations between impairments that, I think, are already well-known, even among dog owners, as mentioned in the abstract.

My main expectation was that the extensive objective clinical data (which is truly great and important) would validate the subjective assessments of sensory deficits and cognitive capabilities. A questionnaire that reliably measures impairments would be very useful for veterinarians, researchers, and owners alike. However, this question was not the focus of the present analyses. The highlighted finding is the significant association between dual sensory impairments (hearing and vision) and increased prevalence of cognitive impairments in older dogs, but these findings, are neither novel nor particularly surprising and there is no need for physiological measurements to achieve these results.

With some difficulties, I could find the correlations between subjective and objective measures, but they were rather weak, as in the case of hearing (Spearman r = -0.27, p = 0.02), or nonexistent, as in the case of vision (at least, "data is not shown" - l292). In the latter case, there was a discrepancy between the subjective and objective measures of sensory impairments, particularly in smaller dogs, where questionnaire results indicated a higher prevalence of sensory impairments compared to clinical evaluations. Unfortunately, this raises questions about the reliability and validity of the applied questionnaires. Although it was mentioned in the text that these questionnaires are validated, perhaps this validation process was not adequate. This issue (i.e. what is the problem with the questionnaires and how could they be developed to improve validity) should be discussed in more detail in the manuscript.

I suggest adding paragraphs in the Methods and Results sections that explicitly investigate the relationship between the questionnaire data and the physiological measures.

The methodological section lacks adequate detail, particularly with regard to the cognitive dysfunction and sensory impairments questionnaires. Only references are mentioned.

Discussion: As promised in the abstract, hypotheses on the biological background ("understanding") of the possible reciprocal relationship between sensory and cognitive deficits would improve the text.

Other comments:

- l20 (Canis...) - The Latin name should begin with a capital C.

- l49 and elsewhere: "cognitive impairment" is used as a synonym for "cognitive dysfunction" in the text. I suggest consistently using the same terminology throughout the manuscript to ensure clarity.

- l84 Study participants: Add the number of participants in this section.

- l98-100: Provide more information about the questionnaires (e.g., number of questions, example questions, how these tools were validated), so readers do not need to look them up in the references. This will also help clarify whether the present study could improve the validation, especially if there were gaps in previous literature. If gaps are identified, mention them in the Introduction.

- l150: Include the weight category of large and small dogs, so readers do not need to look it up in the reference.

- l160: "largest group of young dogs" - Clarify that "large" refers to the sample size and not the body size, if this is the case.

- l169-170: "using standard methods" - Briefly describe what these methods are.

- l185: Explain what can be learned from the list of diseases. How representative are these dogs? What kind of population do they represent?

- l483: Clarify if there was financial support for this study.

Reviewer #2: In this manuscript the authors assessed dog vision and hearing clinically and via questionnaires, to assess the relationships between vision and/or hearing impairments and cognitive impairments. Their results indicate a potential earlier onset of vision impairment compared with hearing impairment.

The authors also established sensory impairment cutoffs based on 161 young dogs then used this to evaluate sensitivity and specificity of the questionnaire. Their goal is to provide a methodology to detect impairment using objective clinical tests using standard methods.

The research question is timely and the approach of the study is also valid. I applaud the authors for administering any sedation or anxiolytics to get better quality data and that they assigned the dogs by life stages.

The presentation of the results is very informative and detailed.

I only have a few minor comments:

line 107 A subset of dogs (n = 91) participated. --It is not clear here in the text what does this refer to, subset of what?

line 146 dak adaptation --typo

The sample size is too small to evaluate the effect of life stages, body size or cephalic index (and their possible interactions with sufficient resolution), but the study is excellent for validating the questionnaires.

What is the difference between table 2 and 3? They seem to be same data with minor differences ( one with n=75 the other with n=76)

I have the same question for table 4 and 5. It is not clear what is the difference between them based on the legend,, apart from sample size (238 vs 227)

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: Yes: Dora Szabo, PhD

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Revision 1

A comprehensive response to reviewer document has been uploaded and submitted

Attachments
Attachment
Submitted filename: Response to reviewers.docx
Decision Letter - Maria Santacà, Editor

Dual sensory impairments in companion dogs: prevalence and relationship to cognitive impairment.

PONE-D-24-17815R1

Dear Dr. Mowat,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Maria Santacà

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: (No Response)

Reviewer #2: I would like to than the authors you for addressing my comments via their revised manuscript. The tables are now much easier to interpret.

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: Yes: Dora Szabo

**********

Formally Accepted
Acceptance Letter - Maria Santacà, Editor

PONE-D-24-17815R1

PLOS ONE

Dear Dr. Mowat,

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team.

At this stage, our production department will prepare your paper for publication. This includes ensuring the following:

* All references, tables, and figures are properly cited

* All relevant supporting information is included in the manuscript submission,

* There are no issues that prevent the paper from being properly typeset

If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps.

Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

If we can help with anything else, please email us at customercare@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Maria Santacà

Academic Editor

PLOS ONE

Open letter on the publication of peer review reports

PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.

We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.

Learn more at ASAPbio .