Peer Review History
| Original SubmissionMarch 27, 2024 |
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PONE-D-24-12142Construction of new polygon mesh-type phantoms based on adult Japanese voxel phantomsPLOS ONE Dear Dr. Sato, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Aug 09 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Additional Editor Comments: This paper has been carefully considered by two referees. One referee has a positive opinion of the paper, while the other has commented on some important issues-treatments of blood and skeleton in phantom developments. The comments indicate that some fundamental revisions are necessary before the paper can again be considered for publication in PLOS ONE. Please revise your manuscript in accordance with reviewers' comments. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: PONE-D-24-12142 Construction of new polygon mesh-type phantoms based on adult Japanese voxel phantoms Sato et al. General Comments This study sought to perform a voxel-to-mesh conversion of the existing voxel-type Japanese reference phantoms to a mesh-type format. The process is well described with a few exceptions – (1) issue of blood content in the organs, and (2) issue of the physical separation of cortical bone and spongiosa within the skeletal models. The utility of the new Japanese mesh-type phantoms is highlighted in a series of comparisons of organ and effective dose coefficients for idealized irradiation geometries as described in ICRP Publication 116. This is a tremendous effort, and the paper is very well written and presented. The effort effectively mirrors that of ICRP Task Group 103 in the similar conversion of phantom formats in the ICRP adult male and adult female reference phantoms. Important issues requiring further clarification are listed below. Specific Comments Page 2, Line 56 Change “modeled adult Japanese polygon mesh-type male” to “created adult Japanese polygon mesh-type male” Change “by modifying the” to “through modification of the” Page 3, Section 2.1 Please give some background information on the reference or mean values of organ masses and volumes for the current Japanese pollution – as used as target volumes in both the previous voxel-type adult male and adult female phantoms, and the newly created mesh-type phantoms. As the authors are well aware, the organs within the ICRP Publication 110 voxel-type reference phantoms are undersized as the reference masses in ICRP Publication 89 were presumed to be inclusive of organ blood volume/mass while in fact they were exclusive of blood volume/mass. As such, a major effort in ICRP Publication 145 was the increase in organ masses from the ICRP Publication 110 phantoms in the voxel-to-mesh conversion project. Does this same issue reside in the Japanese reference phantoms – either or both the voxel-type or mesh-type versions? There are no data tables of organ masses and so it is unclear whether or not reference values exist for the Japanese reference phantoms that distinguish organ tissue mass from organ blood mass. Please elaborate in this section or elsewhere as readers of your paper will be well aware of this issue from ICRP Publications 110 and 145. Page 5, Section 2.2.6 From this section of the study methods, it appears that there was no attempt at differentiating within the skeleton of the Japanese reference phantoms – cortical bone and trabecular spongiosa. Are the skeleton models in both the voxel-type and mesh-type homogenous with respect to cortical bone and spongiosa? If this is true, this is a significant limitation of the phantoms as external and internal radiation doses to both active marrow and bone endosteum – which only reside in the spongiosa regions of the skeleton – will be overestimated as they do not account the particle shielding effect of cortical bone. Please explain if this is the case, and why an attempt to differentiate cortical bone in the mesh-type phantoms was not attempted. Page 8, Table 4 Caption Please move this to the top of page 9 Page 10, Section 2.4 If the skeleton of the mesh-type phantoms is homogeneous and does not include a separate tetrahedral region of cortical bone, then this of course impacts the dose equations on page 10. It would be helpful to take the ICRP Publication 145 phantoms and homogenize that skeleton to match the homogeneous skeleton of the Japanese mesh-type phantom and then perform a sensitivity study of the importance of cortical bone shielding – especially for low-energy photons incident upon the skeletal regions. General Comment This manuscript should additionally include 3D images of both the Japanese voxel-type and Japanese mesh-type phantoms. Please see Figures 2.1 and Figures 6.1/6.2 in ICRP Publication 145. A similar set of images would greatly enhance this paper. Reviewer #2: Excellent work, thanks for sharing this interesting and valuable research! Just two (minor) comments: Lines 507-508: the Table S12 does not show differences in male/female response, as the sentence would suggest Lines 124 and 125 (and also 547 and 548): no "phantom data (JPM and JPF) and the input files for implementing phantoms in PHITS" are loaded in the GitHub repository yet. I also read, in page 5, that the plan is to publish them after acceptance of the article. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: Yes: Daniele Giuffrida ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Construction of new polygon mesh-type phantoms based on adult Japanese voxel phantoms PONE-D-24-12142R1 Dear Dr. Sato, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. 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If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors were very responsive to the prior review of the manuscript. xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx Reviewer #2: The revised article covers and replies to all the observations that have been raised by the Reviewers in a very satisfactory way. Modifications included: 1. clarifications on the use of autopsy sudden death cases, which help to understand how widely applicable to the Japanese population the present models are; 2. Figures 1, 2 and 3 provide a visual and very effective representation of the two different models; 3. clarifications (249, 327) on the deformations of the models due to posture adjustments explain why basic bone internal structure of cortical bone, spongiosa and marrow cavity have not been added yet at this stage; 4. clarifications (299, have been added regarding the mass of blood in organs (included); 5. extensive clarifications (371) have been added on the 10% difference in the absorbed doses to active marrow and endosteum between these and the Japanese phantoms, due to different modelling of internal structure of anatomical bone regions, and additional references (818) With these modifications and explanations, I suggest to accept the paper. Thank you. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Wesley E. Bolch Reviewer #2: Yes: Daniele Giuffrida ********** |
| Formally Accepted |
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PONE-D-24-12142R1 PLOS ONE Dear Dr. Sato, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Professor Sakae Kinase Academic Editor PLOS ONE |
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