Peer Review History
| Original SubmissionMay 25, 2024 |
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PONE-D-24-20393 Reduction of misdiagnosis in urinary tract infections during pregnancy: the role of adjusted urine flow cytometry parameters PLOS ONE Dear Dr. Yang, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Aug 05 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: N/A Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The idea of the study is a very promising one. Indeed, there are a lot of false positive and false negative results. For the diagnosis of urinary tract infection both in pregnant woman and in the female population without this physiological stage. The 2 study groups were correctly chosen. I appreciate the fact that the urine samples were examined double blind by people with special experience. However, despite the design of the study, the idea is at a very beginning because it does not elaborate a clear algorithm for a single person in the conditions of consultation for urinary infection, regardless of the person's pregnancy status or not. For this I belive that a much larger, possibly multicenter study is necessary that includes a major cohort from both groups that allows for some relevant conclusions and the individualization for each individual of what is of interest to clinicians. The bias in this study may also come from the fact that twice as many patients with diabetes are included in the cohort of pregnant women than in the other cohort. Therefore, the study could be of interest in the conditions of a large cohort that can this externalize the minuses or the interpretation deficiency. Even in these conditions, the clinician will decide on antibiotic therapy or not for each individual case, including in the clinical judgement several element, not only age and pregnancy status. The problem being a particularly serious one and on the edge and on one side and the other of the problem in the conditions in which you make a mistake by excess antibiotic therapy when it is not needed or in the minus with the risk of sepsis with urinary entrance in the conditions of physiological immunosuppression during pregnancy. Reviewer #2: This is a study conducted in one center from China and reporting on how to improve urine flow cytometry parameters for detecting leukocyturia in pregnancy. The data are important as they discuss potential erroneous findings that might lead to inappropriate treatment. However the current manuscript is limited by the insufficient description of participant selection and by the unclarities with regards to UTI versus leukocyturia. Specifically, the authors often describe the presence of leukocyturia as indicative for UTI which may not always be the case. The authors should also consider presenting the diagnostic performance of flow cytometry separately for those who have bacteriologically confirmed UTI and those who do not. Further, the discussion would benefit from a more in-depth reflection on the benefits of using this diagnostic test and the implications of misdiagnosis in this patient population. More specific comments below. Introduction - Paragraph 1: suggest leaving out the mortality due to preterm births as the contribution of UTIs to this is not that substantial. The authors could just leave the association with pregnancy complications - Paragraph 2: I would not expect that pregnant women would have much more difficulties in collecting a urine sample than any young adult (I expect it would be much more difficult in the elderly) – consider rephrasing Methods: - Provide more details on how the study participants were selected. Given that they were evenly split into the two groups, I assume that they were not included consecutively - If the study aims to evaluate diagnostic accuracy of UF (as suggested by calculating sensitivities and specificities), then UF should not be included in the definition of the condition (criterion #3) - Microbiological assessment: please be more specific with regards to which bacteria had to be isolated – the bacteria would have to be a uropathogen and there would be one/few bacterial species growing on the plate (otherwise it would be considered contaminated) - The subheading “microbiological examination” has a typographical error - Statistics: would the authors be able to clarify in the methods how false positives and false negatives were defined - Please clarify in the manuscript text how the different gain values were selected Results - The authors should explain why leukocyturia in the absence of bacterial growth in culture was considered as UTI. This should be rephrased, as leukocyturia in the absence of infection can occur in pregnancy. This comment also applies to the methods - The variables should have complete names (e.g. instead of microscope WBC>… ). Also the top information should be filled (replace “+” and “-“ by description) - “Parallel, urine bacterial culture, another gold standard diagnostic method for UTIs, exhibited no significant difference in positive rates between pregnant (17.92%) and non-pregnant women (16.09%) (P > 0.05)” consider removing as this is not clinically meaningful - Define in the footnote of table 3 false positives and negatives Discussion - How do the authors explain the low proportion of positive urine cultures among the study participants given that in other settings bacterial cultures are often positive among patients with UTI symptoms. Please discuss - Discuss in more detail the implications of incorrect UTI diagnosis - Discuss the advantages and disadvantages of using flow cytometry over more conventional methods for diagnosing UTIs (high throughput vs cost) ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Reduction of misdiagnosis in urinary tract infections during pregnancy: the role of adjusted urine flow cytometry parameters PONE-D-24-20393R1 Dear Dr. Yang, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Seth Agyei Domfeh, PhD Academic Editor PLOS ONE |
| Formally Accepted |
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PONE-D-24-20393R1 PLOS ONE Dear Dr. Yang, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Seth Agyei Domfeh Academic Editor PLOS ONE |
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