Peer Review History

Original SubmissionJanuary 14, 2024
Decision Letter - Antoine Fakhry AbdelMassih, Editor

PONE-D-24-01735BATF alleviates ox-LDL-induced HCAEC injury by regulating SIRT1 expression in coronary heart diseasePLOS ONE

Dear Dr. Jin,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

============================== ==============================

Please submit your revised manuscript by May 02 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Antoine Fakhry AbdelMassih

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at 

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

2. PLOS requires an ORCID iD for the corresponding author in Editorial Manager on papers submitted after December 6th, 2016. Please ensure that you have an ORCID iD and that it is validated in Editorial Manager. To do this, go to ‘Update my Information’ (in the upper left-hand corner of the main menu), and click on the Fetch/Validate link next to the ORCID field. This will take you to the ORCID site and allow you to create a new iD or authenticate a pre-existing iD in Editorial Manager. Please see the following video for instructions on linking an ORCID iD to your Editorial Manager account: https://www.youtube.com/watch?v=_xcclfuvtxQ

3. Thank you for stating the following financial disclosure: "Minsheng Research Project of Pudong New Area Science and Technology Development Fund(PKJ2023-Y13),Health Science and Technology Project of Pudong New Area Health Commission (PW2022A-01),Key Discipline Group of Pudong New Area Health and Health Commission (PWZxq2022-11), Peak Discipline Construction of Shanghai Pudong New Area Health Committee (PWYgf2021-04)"

Please state what role the funders took in the study.  If the funders had no role, please state: ""The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."" 

If this statement is not correct you must amend it as needed. 

Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: N/A

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: I would like to congratulate the authors on their sophisticated work, which will help unraveling some of the secrets of coronary atherosclerosis.

However, I have several comments and points of improvement:

1-Discussion:

The authors did not discuss their results thoroughly or compared their work with the existing literature. Instead, the discussion was a repetition of the introduction, emphasizing on the value of research in this area and the existing gaps of knowledge.

2- Results:

the last paragraph (just before the discussion section) is not clear, and there appears to be some mix-up in the presented information (especially in the sentence starting with "Interestingly"). I think you should revise the whole section, and re-write it in a clear and unambiguous way for readers to comprehend.

3-Conclusion:

This section is too long, and starts with an opening general statement. I believe it should be much shorter and more concise, and delver the most important finding of this research work.

Reviewer #2: The reviewer should modify the title and abstract to elucidate the abbreviations mentioned. The reviewer couldn't understand the meaning of abbreviations presented especially HCAEC.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: Yes: Ahmed Adel Elamragy

Reviewer #2: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Revision 1

Thank you for stating the following financial disclosure: "Minsheng Research Project of Pudong New Area Science and Technology Development Fund(PKJ2023-Y13),Health Science and Technology Project of Pudong New Area Health Commission (PW2022A-01),Key Discipline Group of Pudong New Area Health and Health Commission (PWZxq2022-11), Peak Discipline Construction of Shanghai Pudong New Area Health Committee (PWYgf2021-04)"

Please state what role the funders took in the study.  If the funders had no role, please state: ""The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."" 

If this statement is not correct you must amend it as needed. 

Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf.

Response: Thank you for your review and valuable suggestions. In response to your proposed modifications regarding the funder acknowledgment, we have made the necessary adjustments and included the revised statement in our article. The modified statement is as follows: "We received key support from funders above for this study. Funding financial support from the Pudong Science and Technology Development Fund and the Pudong Health and Wellness Committee provided the necessary financial security to enable the study to proceed smoothly. These funds were used for study design, data collection and analysis, and preparation of relevant manuscripts. The support of the funders was instrumental in facilitating the progress and success of this study. We sincerely thank them for their generous support and trust." Once again, we appreciate your guidance and attention.

Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: I would like to congratulate the authors on their sophisticated work, which will help unraveling some of the secrets of coronary atherosclerosis.

However, I have several comments and points of improvement:

1-Discussion:

The authors did not discuss their results thoroughly or compared their work with the existing literature. Instead, the discussion was a repetition of the introduction, emphasizing on the value of research in this area and the existing gaps of knowledge.

Response: Thank you for your valuable comments. We value your feedback on the discussion section of our paper. We do realize that in the discussion section we did not adequately discuss the results or compare our work with the existing literature. In our revision, we will ensure that our results are analyzed in more depth and compared to the existing literature to better highlight the contributions and innovations of our study. We have revisited the discussion section to ensure that it is different from the introduction section and focuses on the interpretation and analysis of our results, as well as ensuring that it is compared to the relevant literature to better reflect the originality and significance of our study. Once again, thank you for your guidance and suggestions, which we will take seriously and do our best to ensure the quality and integrity of the paper.

2- Results:

the last paragraph (just before the discussion section) is not clear, and there appears to be some mix-up in the presented information (especially in the sentence starting with "Interestingly"). I think you should revise the whole section, and re-write it in a clear and unambiguous way for readers to comprehend.

Response: Thank you for your feedback on my thesis. I will carefully consider your suggestions and revise the results section to improve clarity and accuracy. I have revisited the entire paragraph and ensured that the information is presented clearly and concisely to avoid confusing the reader. Thank you again for your review and valuable comment.

3-Conclusion:

This section is too long, and starts with an opening general statement. I believe it should be much shorter and more concise, and delver the most important finding of this research work.

Response: Thank you for your feedback and suggestions. I fully understand your concerns about this section being too long and starting off too general. I have revisited this section and made it more concise to ensure that it more directly conveys the most important findings of this study. I have eliminated the lengthy content and focused on presenting the core ideas to ensure that readers can clearly understand our findings. Once again, thank you for your valuable comment.

Reviewer #2: The reviewer should modify the title and abstract to elucidate the abbreviations mentioned. The reviewer couldn't understand the meaning of abbreviations presented especially HCAEC.

Response: Thank you very much for your valuable comments and review. I fully understand your concern about the identification of abbreviations, especially for the meaning of HCAEC. I will revise the title and abstract of the paper to explain more clearly all the abbreviations used, including HCAEC. During the revision process, I will make sure that the title and abstract accurately reflect the abbreviations used so that readers can more easily understand what our study is about. Thank you again for your suggestions and patient guidance.

Attachments
Attachment
Submitted filename: response to reviewers.docx
Decision Letter - Antoine Fakhry AbdelMassih, Editor

BATF alleviates ox-LDL-induced HCAEC injury by regulating SIRT1 expression in coronary heart disease

PONE-D-24-01735R1

Dear Dr. Tian,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Antoine Fakhry AbdelMassih

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: (No Response)

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Thank you for responding to our observations. However, the discussion section still needs some improvement. It should begin with the most important finding of your experiment. The discussion should also be free of the general information (that is more appropriate for the introduction). Instead, please focus on the findings of your research, and their strengths and limitations, comparing them with other research in the same field.

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: Yes: Ahmed Adel Elamragy

**********

Formally Accepted
Acceptance Letter - Antoine Fakhry AbdelMassih, Editor

PONE-D-24-01735R1

PLOS ONE

Dear Dr. Jin,

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team.

At this stage, our production department will prepare your paper for publication. This includes ensuring the following:

* All references, tables, and figures are properly cited

* All relevant supporting information is included in the manuscript submission,

* There are no issues that prevent the paper from being properly typeset

If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps.

Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

If we can help with anything else, please email us at customercare@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Prof Antoine Fakhry AbdelMassih

Academic Editor

PLOS ONE

Open letter on the publication of peer review reports

PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.

We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.

Learn more at ASAPbio .