Peer Review History
| Original SubmissionMarch 29, 2023 |
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PONE-D-23-08339Prevalence of alcohol use by gender and HIV status in rural Uganda.PLOS ONE Dear Dr. Wynn, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Sep 03 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Daniel Semakula, M.D. MPH, PhD Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please expand the acronym “NIAAA and NIMH” (as indicated in your financial disclosure) so that it states the name of your funders in full. This information should be included in your cover letter; we will change the online submission form on your behalf. 3. We note that you have stated that you will provide repository information for your data at acceptance. Should your manuscript be accepted for publication, we will hold it until you provide the relevant accession numbers or DOIs necessary to access your data. If you wish to make changes to your Data Availability statement, please describe these changes in your cover letter and we will update your Data Availability statement to reflect the information you provide. 4. In your Data Availability statement, you have not specified where the minimal data set underlying the results described in your manuscript can be found. PLOS defines a study's minimal data set as the underlying data used to reach the conclusions drawn in the manuscript and any additional data required to replicate the reported study findings in their entirety. All PLOS journals require that the minimal data set be made fully available. For more information about our data policy, please see http://journals.plos.org/plosone/s/data-availability. Upon re-submitting your revised manuscript, please upload your study’s minimal underlying data set as either Supporting Information files or to a stable, public repository and include the relevant URLs, DOIs, or accession numbers within your revised cover letter. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. Any potentially identifying patient information must be fully anonymized. Important: If there are ethical or legal restrictions to sharing your data publicly, please explain these restrictions in detail. Please see our guidelines for more information on what we consider unacceptable restrictions to publicly sharing data: http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. Note that it is not acceptable for the authors to be the sole named individuals responsible for ensuring data access. We will update your Data Availability statement to reflect the information you provide in your cover letter. 5. Please amend your manuscript to include your abstract after the title page. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: 1. General comments • To me, the why of this study is not clear at all. Position this paper as a mental health related paper. It makes sense that way, otherwise, the why is not clear. 2. Methods • This section is difficult to read because of how its arranged. It would be helpful to have sub headings with outcomes, exposure variables and confounding factors. It’s easier to follow like that 3. Results • Because there are so many components to the analysis, it would be useful to also have sub sections here. As it is, it is really difficult to go through the results section as you have to figure out on your own as a reader where the demographic characteristics ends and regression results are starting. 4. Discussion • My understanding of the analysis was that the authors are trying to understand the role of gender and HIV status in alcohol consumption. But if you look at the studies that they are referencing, mostly focuses on alcohol as a risk factor for HIV infection. I was expecting the discussion to be more about the mental health related reasons that could drive those who have newly been diagnosed with HIV to get into drinking. Similarly, the cultural expectations/norms (which the authors have briefly talked about) to be more prevalent in the discussion about alcohol use and gender. Cite the studies that have looked at gender and alcohol use. The same thing with HIV diagnosis and alcohol consumption, cite more of such studies. • And then the authors can also briefly look at the existing evidence which shows alcohol use as a risk factor for HIV (do not make this the focus of the discussion as it is currently, because that’s not what your study focused on). 5. Study implication • What are the implications of these findings? Why should policy makers care about this study at all? How does this link to the policy direction on alcohol use, mental health, and HIV care in Uganda? Reviewer #2: In this population level cross-sectional study, the authors assessed prevalence of alcohol use by gender and HIV status in rural Uganda. They found that 33% prevalence of alcohol use with higher alcohol consumption in men compared to women. The manuscript does not include line numbers making it difficult to pinpoint the comments to the specific line. The paper is well written and largely coherent. However, the authors need to provide the exact original contribution that the manuscript is adding to the literature. As they have discussed, the findings have been previously demonstrated. It would be helpul if the authors attempted to clearly state what new information this paper is adding and how it differs from the many that have been previously published on the topic of gender and alcohol. Abstract: In the results section of the abstract ….”Men were less likely to report no alcohol use , and more likely …” Please rephrase sentence with alcohol use rather than the “no alcohol use” Include succinct research or programmatic recommendation in the abstract Introduction: Paragraph three “Alcohol use and related outcomes vary by gender “ --- the authors should state the exact outcomes of interest . The authors should include the expected or anticipated benefits of this study i.e estimating alcohol use by gender so that the interest of the readers are captured at the outset. Methods : Third Last line on page 3 : “ Thes levels have been identified …..and adverse clinical outcomes” . The authors should state the outcomes or examples of these outcomes. Page 4 : although authors mention how information of estimated units of alcohol were captured from participants … they do not mention exactly how these were used in filling the AUDIT-C form or how estimated alcohol was arrived at. On HIV testing : the authors used the term “new positive’ and “new negative” . Negative is negative and there is no term as new negative. Wouldn’t the terms “newly diagnosed HIV positive “ and “HIV negative” communicate better? Was HIV recency testing done ? Results: The abstract says age range is 15-59 yrs but tables include 14 years -please resolve this consistency . The tables indicate that age range started at 14 years , The authors need to clarify why they included minors and why not use 18 yrs and above only sample ? The results do not include assessment of intimate partner violence , was this data collected ? what were the results of IPV and HIV results in this population? Discussion Page 8 paragraph 2 : On the directionality of alcohol use and HIV: what happens when a person consuming alcohol is diagnosed with HIV ? Does alcohol consumption reduce after an HIV diagnosis? Page 8 last paragraph: “We found that newly diagnosed with HIV was associated with harmful ……..” Taken together what does this differential HIV risk by gender mean? Are there any recommendations for prevention? Discuss the HIV recency testing results if available or not available The discussion calls for further research, but the statements are generic. Please provide a more nuanced recommendation for the further research that is needed. Also provide Programmatic recommendations if any ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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PONE-D-23-08339R1Prevalence of alcohol use by gender and HIV status in rural Uganda.PLOS ONE Dear Dr. Wynn, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Apr 08 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Miquel Vall-llosera Camps Staff Editor PLOS ONE [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: (No Response) Reviewer #3: All comments have been addressed Reviewer #4: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #3: Yes Reviewer #4: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #3: Yes Reviewer #4: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #3: Yes Reviewer #4: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #3: Yes Reviewer #4: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I maintain the view that the research question has not been adequately addressed. After reviewing the abstract, results, and discussion sections, it is apparent that while the authors have made efforts to incorporate the gender component, there remains a lack of sufficient exploration into the impact of HIV on alcohol use. There appears to be some ambiguity regarding the direction of the relationship between alcohol abuse and HIV. From my interpretation of the study's objective, it seems the authors aimed to investigate alcohol use based on HIV status. Specifically, do individuals with HIV engage in more alcohol consumption compared to those without the virus? Additionally, does the timing of the diagnosis play a role? It appears to be related to coping mechanisms following an HIV-positive diagnosis. The focus of the study should align more with the existing literature, emphasizing the relationship between alcohol use and the psychological impact of an HIV diagnosis rather than exploring whether alcohol abuse increases the risk of HIV, particularly since the study centers on individuals already diagnosed with the virus. Reviewer #3: In this manuscript by Adriane Wynn et al, the authors provide alcohol use prevalence from a cross-sectional analysis in central Uganda, stratified by sex and HIV status, and evaluate correlates of alcohol use, and the relationship between alcohol use and HIV diagnosis status (persons newly diagnosed HIV+, previously diagnosed HIV+ and HIV-negative). The manuscript adds to and supports previously published literature. Overall, I found the authors to be highly responsive to the comments provided by the two reviewers (though I was not one of the initial reviewers). I found the justification for the analysis (the "why" requested by Reviewer 1) to be well explained, the Methods were clear (following revisions suggested by both Reviewers), and the authors provide a thorough review of existing literature on the topic (epidemiology of alcohol use in Uganda and its relationship to HIV infection), and explain how their results add to the literature. One minor point in the Discussion section for the authors to consider, in the paragraph on limitations: - The authors should consider noting (see lines 341-342) that under-reporting of alcohol use may vary by sex. Reviewer #4: The revised version of the article has largely responded to the major comments raised earlier. I concur that the article is better pitched as a mental health related paper. I acknowledge the response by the authors however the article would have been stronger as a mental health paper. There remain a few portions that require minor edits: Line 228- rephrase “less likely to report no alcohol use” Line 234 include the p-value Line 249 edit this “associated with increased the likelihood” Line 326 This study does not have the ability to demonstrate that “alcohol use reduced after diagnosis” due to the study design. I recommend the article for publication after these minor edits. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Martina Mchenga Reviewer #3: No Reviewer #4: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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Prevalence of alcohol use by gender and HIV status in rural Uganda. PONE-D-23-08339R2 Dear Dr. Adriane, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Kahsu Gebrekidan Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #4: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #4: (No Response) ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #4: (No Response) ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #4: (No Response) ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #4: (No Response) ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #4: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #4: No ********** |
| Formally Accepted |
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PONE-D-23-08339R2 PLOS ONE Dear Dr. Wynn, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Kahsu Gebrekidan Academic Editor PLOS ONE |
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