Peer Review History
| Original SubmissionNovember 17, 2023 |
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PONE-D-23-35138ALT/AST ratio: the useful predictive marker for insulin resistancePLOS ONE Dear Dr. Kim, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Before considering the paper for potential publication, authors are recommended to timely and carefully address all the reviewers' comments. Please submit your revised manuscript by Mar 07 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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If your submission does not contain these data, please either upload them as Supporting Information files or deposit them to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of recommended repositories, please see https://journals.plos.org/plosone/s/recommended-repositories. If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. If data are owned by a third party, please indicate how others may request data access. 4. Please amend your authorship list in your manuscript file to include author Dr. Myung Jae Seo. 5. Please amend either the abstract on the online submission form (via Edit Submission) or the abstract in the manuscript so that they are identical. 6. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: No Reviewer #2: Partly Reviewer #3: Yes Reviewer #4: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: N/A Reviewer #3: Yes Reviewer #4: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: No Reviewer #3: Yes Reviewer #4: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No Reviewer #2: Yes Reviewer #3: Yes Reviewer #4: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Title: "ALT/AST ratio: the useful predictive marker for insulin resistance". --------------------------------------------------------------------------------------------------------------------------- Keywords : Keywords should include AST and ALT, ALT/AST Abstract: Why are there 2 different abstracts? Abstract- Background: In one of the abstracts (Alanine aninotransferase/Aspartate aminotransferase ratio for analysis.), the abbreviation ALT/AST was not written. Abstract- Results: Only the findings should be included in the results section. Comments should be avoided. Findings should be presented clearly and statistically in the form of group comparisons. 1. Introduction: a- Why is NAFLD described as dominant rather than insulin resistance and homo-IR? NAFLD relationship is not written in the conclusion section. If NAFLD is an primary issue, this should be stated in the study title. b- Introduction and conclusion sections are unrelated. c- alanine aminotransaminase protein (ALT). protein ?? 2. Methods a- 2.1.Dataset and Participants. The patient population should be clearly differentiated. This section should be summarized. If NAFLD is present, it should be stated whether USG scanning was performed or not. b- Diabetes mellitus was defined as serum fasting glucose level ≥126 mg/dL; previous diagnosis; anti-glycemic drugs. Has this been confirmed 2 times ? c- (high- and low-density lipoprotein (HDL and LDL) cholesterol.) HDL- kolesterol ? LDL-kolesterol ? 3.Results: a- ALT-to-AST ratio. ALT/ALT. please make a standard abbreviation b- Please write the long version of the abbreviations in table 1 in the description. c- What are the criteria for T1-2-3 groups d- What are the r and p values for the ALT/AST correlation with HOMA-IR? ? 4. Dissuscion: Findings should be discussed clearly. Reviewer #2: 1-İn the Method/data set and participants Last sentence ^^ Finally, we selected a population of 11,547 individuals (men: 5,001, women: 6,546) to determine the association between ALT/AST ratio and NAFLD. However, to determine the association of ALT/AST ratio with NAFLD, there must be a definite indication of the presence of NAFLD in the participants, such as abdominal ultrasonography or liver biopsy, and the association must be analysed accordingly. Otherwise, such a result cannot be reported. 2-While the relationship with diabetes, dyslipidaemia and obesity is defined in Figure 1, was the relationship with the healthy control group analysed? 2-İn the Table 1: ALT/AST ratio analysed according to tertile groups; the definition of tertile groups should be better explained. 3-İn the Table 1: ALT/AST ratio analysed according to tertile groups; tertile groups should be better explained. 3-Table 2: ALT/AST ratio analysed by tertile groups; tertile groups need to be better explained. This situation prevents the evaluation of the relationship between ALT/AST ratio and insulin resistance independently of liver diseases. 4- There are many studies investigating the relationship between ALT/AST ratio and insulin resistance in obese, healthy individuals, NAFLD, etc. in the literature. At this point, I recommend hypothesising by carefully reading the literature in the selection of method material. Reviewer #3: This work is important and well-structured and the results support the authors ‘conclusions. Statistical procedures seemed steady. Only, the following minor comments should be considered. 1. The type of study is better to be mentioned in the title. 2. Please clarify statistical analysis section in more detail. For example, method of controlling confounders in this study. 3. Authors need to add the strengths of this study before the paragraph explaining study limitations. 4. Please check the concordance of the tenses used throughout the text. 5. Please define all nonstandard abbreviations used in the text and abstract. Reviewer #4: In this work the authors present a statistical study on predicting insulin resistance with the AST/ALT. However, the presented work is very similar with “Associations of alanine aminotransferase/aspartate aminotransferase with insulin resistance and β-cell function in women”, https://doi.org/10.1038/s41598-023-35001-1. Unless the authors can demonstrate that their work is significantly different from the published work, I do not recommend the paper to be published. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: No Reviewer #4: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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PONE-D-23-35138R1Effectiveness of ALT/AST ratio for predicting insulin resistance in Korean population: Large-scale, cross-sectional cohort studyPLOS ONE Dear Dr. Kim, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Apr 25 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.Prior to publication, there are some minor issues that need to be addressed, as specified below. Please include the following items when submitting your revised manuscript:
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Anna Di Sessa, PhD, MD Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Additional Editor Comments: Authors have well-addressed the previous issues raised by reviewers. However, prior to be considered for publication, there are still some minor concerns: - introduction: this section contains some repeated sentences (e.g.lines 68, 69,73). Overall, it needs to be rephrased to improve clarity. - secondly instead of second (line 319) - lastly instead of last (line 332) - discussion: line 332-335, this sentence should be rephrased in a clearer manner using a scientific language. More, potential prognostic implications should be added. - conclusion: our findings suggest ... instead of we suggest; a practical message for clinicians should be added. - English language should be polished throughout the manuscript. [Note: HTML markup is below. Please do not edit.] [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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Effectiveness of the ALT/AST ratio for predicting insulin resistance in a Korean population: A large-scale, cross-sectional cohort study PONE-D-23-35138R2 Dear Dr. Kim, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Anna Di Sessa, PhD, MD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-23-35138R2 PLOS ONE Dear Dr. Kim, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Anna Di Sessa Academic Editor PLOS ONE |
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