Peer Review History

Original SubmissionJanuary 4, 2024
Decision Letter - Dong Keon Yon, Editor

PONE-D-23-42637Efficacy and safety of tegoprazan in the treatment of gastroesophageal reflux disease: A protocol for meta-analysis and systematic reviewPLOS ONE

Dear Dr. Liu,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

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We look forward to receiving your revised manuscript.

Kind regards,

Dong Keon Yon, MD, FACAAI, FAAAAI

Academic Editor

PLOS ONE

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Additional Editor Comments:

Thank you for submitting your manuscript. The reviewers and I believe it is of potential value for our readers. However, the reviewers have raised a number of very important issues, and their excellent comments will need to be adequately addressed in a revision before the acceptability of your manuscript for publication in the Journal can be determined. We cannot guarantee that your revised paper will be chosen for publication; this would be solely based on how satisfactorily you have addressed the reviewer comments.

# Ref 16 is too old guideline. Please change and cite the reference below.

DOI: https://doi.org/10.54724/lc.2022.e9

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions?

The research question outlined is expected to address a valid academic problem or topic and contribute to the base of knowledge in the field.

Reviewer #1: No

Reviewer #2: Yes

**********

2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses?

The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory.

Reviewer #1: Partly

Reviewer #2: Yes

**********

3. Is the methodology feasible and described in sufficient detail to allow the work to be replicable?

Descriptions of methods and materials in the protocol should be reported in sufficient detail for another researcher to reproduce all experiments and analyses. The protocol should describe the appropriate controls, sample size calculations, and replication needed to ensure that the data are robust and reproducible.

Reviewer #1: No

Reviewer #2: Yes

**********

4. Have the authors described where all data underlying the findings will be made available when the study is complete?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception, at the time of publication. The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: No

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: No

Reviewer #2: No

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics.

You may also provide optional suggestions and comments to authors that they might find helpful in planning their study.

(Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: This protocol needs to be reported following the guidelines of the Cochrane Handbook for Systematic Reviews of Interventions and the Preferred Reporting Items for Systematic Reviews and Meta-Analyses; the authors need to elucidate the necessity of performing such meta-analysis, as some similar reviews have been reported; and the manuscript needs extensive revision for language and grammar.

Reviewer #2: This is a good article, but there are some part that needs to be modified.

1. please put your country in your affiliation statement

2. please make same bold letters in subtitle of Abstract. (e.g. Objective: Methods: ,etc,)

3. please put PubMed, Embase, Cochrane Library databases, and Web of Science

- you have to put , before using "and"

4. Authors have to put line numbers in manuscript for readability of reviewers

5. Could you put reference in following sentences: "Drugs such as histamine H2 receptor blockers and proton pump inhibitors (PPIs), which inhibit gastric acid secretion, are effective in the treatment of acid-related diseases and may improve patients' quality of life. However, there are still some limitations of the existing drug therapy."

6. MATERIAL AND METHODS/ Patients

You don't have to mention this part. if you need to mention this part. Please explain it.

7. Do you have a reference for standard of Inclusion criteria and exclusion criteria that you utilized in your article.

8. I know what you want to talking about in "Studies collection" this section, but could you please explain it in an easy-to-understand manner?

9. Could you put more references in Methods part.

It would be helpful, you could get many references about your methods section.

# Sandbank M, Bottema-Beutel K, Crowley LaPoint S, Feldman JI, Barrett DJ, Caldwell N, Dunham K, Crank J, Albarran S, Woynaroski T. Autism intervention meta-analysis of early childhood studies (Project AIM): updated systematic review and secondary analysis. BMJ. 2023 Nov 14;383:e076733. doi: 10.1136/bmj-2023-076733. PMID: 37963634; PMCID: PMC10644209.

10. Discussion part should divided in results part and discussion part

please refer this article

Hume-Nixon M, Quach A, Reyburn R, Nguyen C, Steer A, Russell F. A Systematic Review and meta-analysis of the effect of administration of azithromycin during pregnancy on perinatal and neonatal outcomes. EClinicalMedicine. 2021 Sep 9;40:101123. doi: 10.1016/j.eclinm.2021.101123. PMID: 34541478; PMCID: PMC8436060.

11. Founding to Funding

12. please modify reference with "Times new roman, 12pt"

13. make whole manuscript of line spacing with 160%

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

**********

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Revision 1

Dear editor and dear reviewers

Re Manuscript ID (PONE-D-23-42637) entitled " Efficacy and safety of tegoprazan in the treatment of gastroesophageal reflux disease: A protocol for meta-analysis and systematic review ". Thank you for your letter and for the reviewer’s comments. Those comments are all valuable and very helpful for revising and improving our paper, as well as the important guiding significant to our research. We have studies comments carefully and have made correction which we hope meet with approval. Revised portion are marked in red in the paper. The main correction in the paper and responds to the reviewer’s are as flowing:

Additional Editor Comments:

Thank you for submitting your manuscript. The reviewers and I believe it is of potential value for our readers. However, the reviewers have raised a number of very important issues, and their excellent comments will need to be adequately addressed in a revision before the acceptability of your manuscript for publication in the Journal can be determined. We cannot guarantee that your revised paper will be chosen for publication; this would be solely based on how satisfactorily you have addressed the reviewer comments.

# Ref 16 is too old guideline. Please change and cite the reference below.

DOI: https://doi.org/10.54724/lc.2022.e9

Responds: Many thanks to the editors for their comments, and we have revised the article's 16th reference.

Reviewer #1: This protocol needs to be reported following the guidelines of the Cochrane Handbook for Systematic Reviews of Interventions and the Preferred Reporting Items for Systematic Reviews and Meta-Analyses; the authors need to elucidate the necessity of performing such meta-analysis, as some similar reviews have been reported; and the manuscript needs extensive revision for language and grammar.

Responds: Thank you very much for the reviewer's comments, We followed the Cochrane Handbook for Systematic Reviews of Interventions and the Preferred Reporting Items for Systematic for articles Reviews and Meta-Analyses were revised to add study necessity. However, our search found no similar review assessment.

Reviewer #2: This is a good article, but there are some part that needs to be modified.

1. please put your country in your affiliation statement

responds: Many thanks to the reviewers, we have added the countries.

2. please make same bold letters in subtitle of Abstract. (e.g. Objective: Methods: ,etc,)

responds: Many thanks to the reviewers, we have revised it.

3. please put PubMed, Embase, Cochrane Library databases, and Web of Science

- you have to put , before using "and"

responds: Many thanks to the reviewers, we have revised it.

3. Authors have to put line numbers in manuscript for readability of reviewers

Responds: Thank you very much to the reviewer, we have added line numbers.

4. Could you put reference in following sentences: "Drugs such as histamine H2 receptor blockers and proton pump inhibitors (PPIs), which inhibit gastric acid secretion, are effective in the treatment of acid-related diseases and may improve patients' quality of life. However, there are still some limitations of the existing drug therapy."

Responds: Thank you very much to the reviewer, we have added reference.

6. MATERIAL AND METHODS/ Patients

You don't have to mention this part. if you need to mention this part. Please explain it.

responds: Many thanks to the reviewers for their comments, we have revised the article. This section has been deleted.

7. Do you have a reference for standard of Inclusion criteria and exclusion criteria that you utilized in your article.

responds: Our reference on inclusion criteria is at 18.

8. I know what you want to talking about in "Studies collection" this section, but could you please explain it in an easy-to-understand manner?

responds:The purpose of our paragraph is to express a process by which we sift through the articles.

9. Could you put more references in Methods part.

It would be helpful, you could get many references about your methods section.

responds: Many thanks to the reviewers for their comments, which we have revised.

# Sandbank M, Bottema-Beutel K, Crowley LaPoint S, Feldman JI, Barrett DJ, Caldwell N, Dunham K, Crank J, Albarran S, Woynaroski T. Autism intervention meta-analysis of early childhood studies (Project AIM): updated systematic review and secondary analysis. BMJ. 2023 Nov 14;383:e076733. doi: 10.1136/bmj-2023-076733. PMID: 37963634; PMCID: PMC10644209.

10. Discussion part should divided in results part and discussion part

please refer this article

Hume-Nixon M, Quach A, Reyburn R, Nguyen C, Steer A, Russell F. A Systematic Review and meta-analysis of the effect of administration of azithromycin during pregnancy on perinatal and neonatal outcomes. EClinicalMedicine. 2021 Sep 9;40:101123. doi: 10.1016/j.eclinm.2021.101123. PMID: 34541478; PMCID: PMC8436060.

responds; The reviewer's comments are very much appreciated, as our article in this instance was a planner and did not have a results section, so we made suitable changes to the discussion.

11. Founding to Funding

responds: Many thanks to the reviewers for their comments, which we have revised.

12. please modify reference with "Times new roman, 12pt"

responds: Many thanks to the reviewers for their comments, which we have revised.

13. make whole manuscript of line spacing with 160%

responds: Many thanks to the reviewers for their comments, which we have revised.

Decision Letter - Dong Keon Yon, Editor

Efficacy and safety of tegoprazan in the treatment of gastroesophageal reflux disease: A protocol for meta-analysis and systematic review

PONE-D-23-42637R1

Dear Dr. Liu,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

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If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Dong Keon Yon, MD, FACAAI, FAAAAI

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

This is an excellent paper.

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions?

The research question outlined is expected to address a valid academic problem or topic and contribute to the base of knowledge in the field.

Reviewer #2: Yes

**********

2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses?

The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory.

Reviewer #2: Yes

**********

3. Is the methodology feasible and described in sufficient detail to allow the work to be replicable?

Descriptions of methods and materials in the protocol should be reported in sufficient detail for another researcher to reproduce all experiments and analyses. The protocol should describe the appropriate controls, sample size calculations, and replication needed to ensure that the data are robust and reproducible.

Reviewer #2: Yes

**********

4. Have the authors described where all data underlying the findings will be made available when the study is complete?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception, at the time of publication. The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics.

You may also provide optional suggestions and comments to authors that they might find helpful in planning their study.

(Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #2: Congratulations. The manuscript is much better than the original version.

Actually, I think there have to be more references in the methods section.

please put more references in your methods section while proof process

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #2: No

**********

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