Peer Review History
| Original SubmissionAugust 17, 2023 |
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PONE-D-23-24057Study protocol to examine the effects of acute exercise on motor learning and brain activity in children with developmental coordination disorder (ExLe-Brain-DCD)PLOS ONE Dear Dr. Busquets, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. You will find comments from a reviewer below. I included a few additional comments below. In the resubmission, please reply to all comments made by me and the reviewer.
Please include the following items when submitting your revised manuscript:
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Bradley R. King Academic Editor PLOS ONE Journal requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match. When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section. 3. Your ethics statement should only appear in the Methods section of your manuscript. If your ethics statement is written in any section besides the Methods, please move it to the Methods section and delete it from any other section. Please ensure that your ethics statement is included in your manuscript, as the ethics statement entered into the online submission form will not be published alongside your manuscript. 4. Thank you for stating the following in the Acknowledgments Section of your manuscript: [We thank Dr. Priscila Tamplain (Developmental Motor Cognition Lab, Department of Kinesiology, University of Texas at Arlington, USA) and Dr. Nadja Schott (Institute of Sport and Exercise Science, University of Stuttgart, Germany) for their collaboration in the project. We also thank the Grup de Recerca en Activitat Física, Alimentació i Salut (GRAFAiS, Generalitat de Catalunya 2021SGR/01190) for their support.] We note that you have provided funding information that is not currently declared in your Funding Statement. However, funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows: [AB, BF, FB, and RA as authors of this study that is part of the R+D+i project PID2020-120453RB-I00 received funding from the Ministerio de Ciencia e Innovación – Agencia Estatal de Invenstigación (https://www.aei.gob.es/; MCIN/AEI/10.13039/501100011033/). In addition, MA earned a PhD fellowship funded by the Institut Nacional d'Educació Física de Catalunya (INEFC) of the Generalitat de Catalunya (https://inefc.gencat.cat/es/inefc_barcelona/). The funders had and will not have a role in the study design, data collection and analyses, decision to publish, or preparation of the manuscript.] Please include your amended statements within your cover letter; we will change the online submission form on your behalf. 5. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions? The research question outlined is expected to address a valid academic problem or topic and contribute to the base of knowledge in the field. Reviewer #1: Yes ********** 2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses? The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory. Reviewer #1: Yes ********** 3. Is the methodology feasible and described in sufficient detail to allow the work to be replicable? Descriptions of methods and materials in the protocol should be reported in sufficient detail for another researcher to reproduce all experiments and analyses. The protocol should describe the appropriate controls, sample size calculations, and replication needed to ensure that the data are robust and reproducible. Reviewer #1: Yes ********** 4. Have the authors described where all data underlying the findings will be made available when the study is complete? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception, at the time of publication. The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics. You may also provide optional suggestions and comments to authors that they might find helpful in planning their study. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The present manuscripts presents a Study Protocol for a project that aims to unravel the underlying mechanism of the (motor) learning difficulties in children with DCD. This is a very interesting, important and ambitious topic. The methodology of the project seems sound and I am already looking forward to the results. I only have a few comments/suggestions with respect to the paper and project. 1. The introduction is rather lengthy and somewhat repetitive. The text can be condensed. E.g. I do appreciate that the authors provide a comprehensive overview of DCD and its consequences, but this information can be summarized and the reader can be referred to some excellent recent review papers. Given that the many authors refer to DSM V (APA, 2013) it seems to make sense to refer to this manuscript too. Specific minor comments Abstract L39: Given that these effects are generally limited to (moderate to) vigorous physical activity I would suggest being specific here. Or to use physical exercise. L168: typo: prefrontal cortex' role L363 and 367: typically developing children is the preferred term (instead of developed) L376: the groups will be matched on age, gender, weight, handedness, PA engagement and fitness level. I understand why, but it seems to be very complex to match each and every child on 6 factors. Can the authors please explain how this will be done. L421: Given that the study will use matched control groups, allocation cannot be fully randomized, I think. L602: What are the regions of interest and how will parcellation of the regions of interest be done? L636-638: Is this analysis necessary, given that the groups will be matched? L699: Is it necessary to use sex as a covariate, given that the groups will be matched? Also, please note that the construct "gender" was used before. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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PONE-D-23-24057R1Study protocol to examine the effects of acute exercise on motor learning and brain activity in children with developmental coordination disorder (ExLe-Brain-DCD)PLOS ONE Dear Dr. Busquets, Thank you for submitting your manuscript to PLOS ONE. I want to apologize for the delay in getting back to you after the latest manuscript submission. As stated in our earlier correspondence, the policy of PLOS One for study protocols is to have a statistical reviewer. We had difficulty getting a qualified individual to take on this review but we just received comments from such an individual. You will see their comments and suggestions below. Accordingly, we invite you to submit a revised version of the manuscript that addresses these concerns and comments. I have included the full review below, but I wish to highlight here what I consider the most important comments that warrant your attention. - The comment on the choice of the control group as it pertains to the design, effect size and size of the proposed sample. - The comment on the type of data (potentially ordinal) and the choice of statistical test (parametric vs. non parametric). - The comment on the data analysis with respect to the number of groups and the type of test used (i.e., ANOVA vs. t-tests). And the related comments with respect to clarity of the design (e.g., clarifying number of observations) Please submit your revised manuscript by Mar 15 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Bradley R. King Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions? The research question outlined is expected to address a valid academic problem or topic and contribute to the base of knowledge in the field. Reviewer #2: Partly ********** 2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses? The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory. Reviewer #2: No ********** 3. Is the methodology feasible and described in sufficient detail to allow the work to be replicable? Descriptions of methods and materials in the protocol should be reported in sufficient detail for another researcher to reproduce all experiments and analyses. The protocol should describe the appropriate controls, sample size calculations, and replication needed to ensure that the data are robust and reproducible. Reviewer #2: No ********** 4. Have the authors described where all data underlying the findings will be made available when the study is complete? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception, at the time of publication. The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #2: No ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics. You may also provide optional suggestions and comments to authors that they might find helpful in planning their study. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #2: Important note: This review pertains only to ‘statistical aspects’ of the study and so ‘clinical aspects’ [like medical importance, relevance of the study, ‘clinical significance and implication(s)’ of the whole study, etc.] are to be evaluated [should be assessed] separately/independently. Further please note that any ‘statistical review’ is generally done under the assumption that (such) study specific methodological [as well as execution] issues are perfectly taken care of by the investigator(s). This review is not an exception to that and so does not cover clinical aspects {however, seldom comments are made only if those issues are intimately / scientifically related & intermingle with ‘statistical aspects’ of the study}. Agreed that ‘statistical methods’ are used as just tools here, however, they are vital part of methodology [and so should be given due importance]. I look at the manuscript in/with statistical view point, other reviewer(s) look(s) at it with different angle so that in totality the review is very comprehensive. However, there should be efforts from authors side to improve (may be by taking clues from reviewer’s comments). Therefore, please do not limit the revision only (with respect) to comments made here. COMMENTS: There are quite a few issues (including few serious objections/observations) about which I have different opinion. Such observations/concerns are given below: Firstly, I observed that your ABSTRACT [though drafted alright in my opinion], is ‘assay type’. It is preferable to divide the ABSTRACT with small sections like ‘Objective(s)’, ‘Methods’, ‘Results’, ‘Conclusions’, etc. which is an accepted practice of most of the good/standard journals [including this one, though ‘The PLoS One Guidelines to Authors’ did not specify an Abstract format, it is desirable]. It will definitely be more informative then, I guess, whatever the article type may be (including ‘protocol’). As noted by some reviewer earlier, the introduction is lengthy [nearly occupies 38% of total length though I appreciate providing a comprehensive overview of DCD and its consequences]. Nearly 65% references (out of total 140) are related to the introduction. Can this be reduced further? (Assumed that you might have done it earlier). Further, I request these learned authors to kindly recheck the ‘Sample size calculation’ [lines 357-368] because {though ‘GPower’ is an excellent package} the results are different than well-known standard [table-2 on page 158 of Jacob Cohen’s paper “A power primer” in Psychological Bulletin, 1992, vol.:112, pp 155-159 (which is a sort of summary of the excellent book by Cohen himself titled ‘Statistical power analysis for the behavioral sciences’, Academic Press, 1977, New York)]. This is probably due to large ‘effect size’ assumed {The effect sizes (ES) in these studies were 0.78 and 0.55} whereas in fact for such intervention(s) the effect size found/noted is generally at-the-most be ‘medium’. I have one basic doubt regarding the correctness of choice of a control group [for example, look at the statement made in lines 246-7: whether the children with DCD could benefit from this strategy to improve their motor learning capacity is not known]. From the account given in lines 44 to 46 {One hundred twenty children will be recruited (60 DCD, 60 controls) and within-cohort randomly assigned to either exercise (13-minute shuttle run task) or rest prior to performing the rVMA task} it is clear that cohort of 60 children with DCD will further be divided in two groups which is alright. But then I doubt about the ‘effect size’ assumed (very large & so the required n=120). Therefore, I again request authors to recheck the control group of those studies {line 357-359: Statistical power analyses were performed for the sample size estimation, based on initial directional error (IDE) data from Kagerer et al. [47] study (N=20) comparing TD to DCD and from Ferrer-Uris et al. [57] study (N=21) comparing EX and CON groups}. ‘What exactly you mean by “Statistical power analyses were performed for the sample size estimation”. Do we usually perform ‘Statistical power analyses for the sample size estimation’? What is in lines 584-6 [Assumptions for the statistical tests will be checked before their application and necessary adjustments, corrections or supplementary calculations will be applied to increase the robustness of the results] is highly appreciated, however, I request authors to carefully read the following note which is pasted from one famous standard textbook on ‘Medical Research Methodology’ [though I am sure that the authors already know these things]. Please use suitable non-parametric test(s)/technique(s) while dealing with data that are in ‘ordinal’ level of measurement even if [despite that] the distribution may be ‘Gaussian’. Testing ‘normality’ in sample [by using any normality test(s)} is not required/desired while dealing with data that are in ‘ordinal’ level of measurement [as most of the normality tests are not valid for ‘ordinal’ data]. Agreed that there is/are no non-parametric test(s)/technique(s) available to be used as alternative in all situation(s), but should be used whenever/wherever they are available. Note that though the measures/tools used are appropriate, most of them are likely to yield data that are in ‘ordinal’ level of measurement [and not in ratio level of measurement for sure {as the score two times higher does not indicate presence of that parameter/phenomenon as double (for example, a Visual Analogue Scales VAS score or say ‘depression’ score)}]. Then application of suitable non-parametric (or distribution free) test(s) is/are indicated/advisable. Description in ‘Data analysis’ section is confusing in the sense that ‘how many groups data are dealt here’? If two groups, then why do you need ANOVA? How the measures are to be explored through one-way analysis of variance (ANOVA)? [refer to lines 559-561: Age, sex at birth, BMI, handedness, physical activity engagement, and fitness level (estimated VO2max) measures will be explored through one-way analysis of variance (ANOVA)]. What do you mean by exploring measures through ANOVA? Refer to lines 576-78 where stated that “Differences between the children groups (O1.2 and O1.3) on the motor learning and on the cortical activity (O2.1 and O2.2) through all sets will be explored using a General Lineal Mixed Model (GLMM) with repeated measures”. Are differences between the children groups explored using a General Lineal Mixed Model (GLMM) with repeated measures? How many times repeated observations you have? Please clarify all the aspects of ‘DESIGN’ of the study, first [very clearly]. Remember/mind you that this is a scientific/academic document and so all details should be clearly/correctly communicated (do not take readers’ for granted). Kindly check for the ‘English’ language. Agreed that English is not our mother tongue (definitely not mine, may or may not be yours but certainly not of many readers). In lines 685-88, it is stated that “Recognizing the inherent limitations of this project, we may help teachers and parents in identifying those children at risk or high probability of presenting DCD by generating and distributing (via workshops) guidelines for the diagnosis of this disorder and proper interventions for these children”. Is that a part of this study/project? Does that mean {according to authors} there are no other {this is not a limitation of this study anyway}, limitation(s) of this study? As pointed out in ‘important note’ above “This review pertains only to ‘statistical aspects’ of the study and so ‘clinical aspects’ should be assessed separately/independently [one should carefully consider/look at the clinical implications of the study]. In my opinion, to make this article acceptable (which is possible though not easy), some amount of re-vision (re-drafting) may be needed. However, please do not limit the revision only (with respect) to comments made here. The respected ‘Editor’ may consider accepting/further processing only if found ‘clinical implications’ valuable [i.e., add(s) to clinical knowledge or positively influence clinical practice]. ‘Major revision’ is recommended. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 2 |
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Study protocol to examine the effects of acute exercise on motor learning and brain activity in children with developmental coordination disorder (ExLe-Brain-DCD) PONE-D-23-24057R2 Dear Dr. Busquets, We thank you for your patience during this review process. And we appreciate your thoughtful comments in responses to the latest round of reviews. We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Bradley R. King Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-23-24057R2 PLOS ONE Dear Dr. Busquets, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Bradley R. King Academic Editor PLOS ONE |
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