Peer Review History
| Original SubmissionNovember 7, 2023 |
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PONE-D-23-36482Progress and Challenges in Achieving Tuberculosis Elimination in India by 2025: A Systematic Review and Meta-AnalysisPLOS ONE Dear Dr. Agarwal,, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Mar 01 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Kind regards, Muhammad Shahzad Aslam, Ph.D.,M.Phil., Pharm-D Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. When completing the data availability statement of the submission form, you indicated that you will make your data available on acceptance. We strongly recommend all authors decide on a data sharing plan before acceptance, as the process can be lengthy and hold up publication timelines. Please note that, though access restrictions are acceptable now, your entire data will need to be made freely accessible if your manuscript is accepted for publication. This policy applies to all data except where public deposition would breach compliance with the protocol approved by your research ethics board. If you are unable to adhere to our open data policy, please kindly revise your statement to explain your reasoning and we will seek the editor's input on an exemption. Please be assured that, once you have provided your new statement, the assessment of your exemption will not hold up the peer review process. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions? The research question outlined is expected to address a valid academic problem or topic and contribute to the base of knowledge in the field. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses? The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory. Reviewer #1: Yes Reviewer #2: Partly ********** 3. Is the methodology feasible and described in sufficient detail to allow the work to be replicable? Reviewer #1: Yes Reviewer #2: No ********** 4. Have the authors described where all data underlying the findings will be made available when the study is complete? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception, at the time of publication. The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics. You may also provide optional suggestions and comments to authors that they might find helpful in planning their study. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The research article “Progress and Challenges in Achieving Tuberculosis Elimination in India by 2025: A Systematic Review and Meta-Analysis”. The topic is interesting and sounds well to readers. Well, the manuscript writing is good and the author please incorporates my suggestion to enhance the effectiveness of this manuscript. All comments are shared in the document attached below. Comment 1: In introduction part check the language and write more scientifically Comment 2: In introduction part also mentioned about the worldwide and Indian data regarding the Tuberculosis (About suffereing people) Comment 3: Revision is required in the whole manuscript, English and grammatical errors should be corrected. Reviewer #2: This article outlines a protocol for a systematic review to assess the progress and challenges in achieving tuberculosis (TB) elimination in India by 2025. It addresses an important topic, especially given the disease burden of TB in India. The extent of the study may provide a comprehensive overview of the progress and challenges in eliminating TB in India by 2025. However, there are several issues that needs to be clarified and/or addressed to further guarantee a detailed, replicable methodology for a systematic review protocol. Below are more specific comments by section: Introduction: • 2(51-61) The first paragraph seems unnecessary. The introduction about TB should be kept concise. Instead, add more description for the following point. • 2(64-74) The introduction provided a good description of the already identified challenges of TB elimination. However, the introduction fails to address how the findings of the planned systematic review will relate to previous research in this area. I suggest that these established challenges be framed more explicitly. How has TB elimination progressed previously? What are the trends? What are the trends? How has the challenges evolved previously? What have been done previously? • 2(76-77) The authors should clarify the aim of the protocol to avoid confusion. The article itself is a systematic review protocol, not a systematic review. Thus, the aim should be reworded to provide clarity. Instead of “this systematic review…”, the aim should be reworded into something like “this protocol aims to outline a systematic review of…” Methods: • 5(171-174) The supplementary file for the search strategy seems to be corrupted or wrongly uploaded. I can only see one page of search strategy for Medline database. • 5(182-183) The authors claim that they might consult secondary databases for the review. This is unclear. How will the authors decide whether the secondary databases be consulted or not? If you choose not to consult the secondary databases, how will you ensure that your search is comprehensive? • 6(207-209) The authors plan to only include qualitative studies providing unique insights in the review. This contradicts the methods described in the abstract and the fourth outcome measurement; Barriers and Facilitators to TB Care. • 6(226-234) In the initial screening phase, two independent reviewers are planned to screen titles. Please clarify how the titles will be collated before the full-text review. Will all titles by each reviewer proceed for the full-text review? Or will there be a discussion or consultation on the titles before proceeding to the full-text review? • 8(297-300) The description of the planned meta-analysis is too concise. Please provide more description on what meta-analytic techniques will be employed. Provide examples and how decision will be made to use what statistical technique. • 8(301-303) Similarly, the description of the planned subgroup analyses is too concise. Please consider providing more description on what statistical techniques will be employed for the subgroup analyses. Discussion: • In general, it is highly suggested that the authors consider relating the findings of the current review with any past studies on the progress and challenges on TB elimination in India. How did the progress and challenges look like more than 10 years ago? How has the progress evolved? Are the challenges the same? • 10(390-391) The authors only mentioned discussion between reviewers but did not mention consultation with a third reviewer. This does not align well with the previous sections of the protocol. Conclusion: • The wording to refer the present article may cause confusion. I suggest to refer the article as a protocol that plans for a systematic review. Consequently, the concluding remarks can be enriched by discussing what the protocol itself adds to the body of research literature. Instead of discussing about the review, explain more on how the protocol can help other researchers to prepare a similar protocol, compare methodological strategies etc. Others: • Please go-through the manuscript for typos and grammatical errors to ensure good quality English writing. For example, 3(100), 10(390) and 10(397). Most of the typos are due to inconsistent spacing between letters. Additionally, please double check the bibliography. Reference number 16 appears to be wrongly formatted. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Progress and Challenges in Achieving Tuberculosis Elimination in India by 2025: A Systematic Review and Meta-Analysis PONE-D-23-36482R1 Dear Dr. Agarwal, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at http://www.editorialmanager.com/pone/ and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Muhammad Shahzad Aslam, Ph.D.,M.Phil., Pharm-D Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions? The research question outlined is expected to address a valid academic problem or topic and contribute to the base of knowledge in the field. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses? The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory. Reviewer #1: Yes Reviewer #2: Yes ********** 3. Is the methodology feasible and described in sufficient detail to allow the work to be replicable? Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors described where all data underlying the findings will be made available when the study is complete? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception, at the time of publication. The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics. You may also provide optional suggestions and comments to authors that they might find helpful in planning their study. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The research article “Progress and Challenges in Achieving Tuberculosis Elimination in India by 2025: A Systematic Review and Meta-Analysis”. The topic is interesting and sounds well to readers. All the changes are done and now paper is accepted for publication Reviewer #2: The authors have responded well to the reviewers comments and the amendments made are adequate. The revised version is appropriate for publication. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Dr. Mukul Kumar Reviewer #2: No ********** |
| Formally Accepted |
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PONE-D-23-36482R1 PLOS ONE Dear Dr. Agarwal, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Muhammad Shahzad Aslam Academic Editor PLOS ONE |
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