Peer Review History
| Original SubmissionMarch 29, 2023 |
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PONE-D-23-06245Clinical Outcomes of Corneal Neurotization Using Sural Nerve Graft in Neurotrophic KeratopathyPLOS ONE Dear Dr. Jain, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Jul 15 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Bhavana Sharma, MS Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. In your Data Availability statement, you have not specified where the minimal data set underlying the results described in your manuscript can be found. PLOS defines a study's minimal data set as the underlying data used to reach the conclusions drawn in the manuscript and any additional data required to replicate the reported study findings in their entirety. All PLOS journals require that the minimal data set be made fully available. For more information about our data policy, please see http://journals.plos.org/plosone/s/data-availability. Upon re-submitting your revised manuscript, please upload your study’s minimal underlying data set as either Supporting Information files or to a stable, public repository and include the relevant URLs, DOIs, or accession numbers within your revised cover letter. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. Any potentially identifying patient information must be fully anonymized. Important: If there are ethical or legal restrictions to sharing your data publicly, please explain these restrictions in detail. Please see our guidelines for more information on what we consider unacceptable restrictions to publicly sharing data: http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. Note that it is not acceptable for the authors to be the sole named individuals responsible for ensuring data access. We will update your Data Availability statement to reflect the information you provide in your cover letter. 3. Please amend your manuscript to include your abstract after the title page. 4. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. Additional Editor Comments: Dear Authors Please address the enclosed comments of reviewers , following which the MS would be re-evaluated for adequacy of publication .Furthermore kindly give your comments on the following: 1.Please specify the severity grading in each diagnosis subgroup .How was homogeneity ensured wrt clinical features and severity grade in each group . 2. Was the adjunctive medication pre/postop ,uniform in all pts/study groups? 3.What preoperative treatment was accorded to each group and what was the follow up period ? whether it was uniform for all patients ,before subjecting them to study intervention. Postoperative medication , dose/ duration would be relative to the same . 4.Was the effect of neurotization dependent on preoperative diagnosis, severity and supportive medication .If it was better in any particular group/patients ,it can be included in discussion along with pathophysiological correlation . 5.There remains a possibility of disease recurrence in HSV /HZO, how was this ruled out and adequacy of medication ensured before subjecting the patient for neurotization . Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes Reviewer #3: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: Yes Reviewer #3: No ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: No Reviewer #3: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Sample size should be calculated based on the study design and test hypothesis, especially to provide sufficient power to demonstrate efficacy. It should not be based on recruitment availability. The statistical methods need more work. For repeated measures, a repeated measure model should be used. Where was the Fisher’s exact test used? With a small, limited sample size, there are many outcomes and tests to consider. P-values should be adjusted. Why was the significance level set at 0.01 for the correlation, but 0.05 for other tests? The subtitle “summary background data” in the abstract is not correct. In Figure 1, the flowchart should not be separated into two arms after follow-up. The method used to compare the normal group is not described. The footnote in Table 4 can be omitted. Reviewer #2: The authors cover a very important and interesting topic. Their results are impressive and highlight a very promising emerging treatment for neurotrophic keratopathy. The intraoperative and slit lamp images are beautiful, showcasing the potential impact for patients. The study is not unique since there have been several other similar case series, but given the still relative novelty of this treatment and the impressive results, I do think it merits publication. A few points for improvement: 1. There are numerous grammatical errors, incorrect usage of words, and awkward sentences. I recommend professional copyediting to be performed prior to publication. 2. The authors simply state that medical management had failed, but there are not enough details on what kind of medical management. Please clarify what medical treatments were used and for how long prior to surgery. 3. The authors detailed the post-operative medications prescribed to all patients, but it is not clear if other medical treatments for NK were allowed (i.e. artificial tears, serum tears, scleral lenses, etc). 4. Was there any significant difference in the results based on the etiology of NK? It may be difficult due to the already small sample size, but it would be interesting to know if certain diagnoses portend a better prognosis. Reviewer #3: Comments to the Author 1. Overall, the manuscript requires major revision towards statistical analysis. Also, I have a great concern about 1 year conclusions because of great loss to follow-up (even 46%, 6 out of 11 patients/eyes). I recommend ending reporting with the 9th month measurement, because of the reliability of results and its potential for generalisation. 2. Introduction: Line 47-49 – There is an explanation about evidence of neuroparalytic-like corenal alterations in mice, but it is necessary to explain this state in humans a bit. Please add an explanation and an appropriate reference. Line 55-56 – References regarding high costs missed. Please add. 3. Methods: Line 175-180 – Did the authors evaluate the normality of numerical data? Which of the methods did you use? Please, include this in statistical analysis subsection of the methods. Also, report full names of applied statistical tests for comparing values of evaluated parameters within the statistical methods and in the description of all tables where appropriate. Insert symbols like €, £, etc. where more than one test was applied. Please, explain why did you choose the significance level of 0.01 for correlation analysis. It will not change the conclusion if it is 0.05, as it is recommended for biology research. 4. Results: Correct capital P value into small letter p value throw-out whole manuscript and in tables also. P value can not be 0.00, so change it into number with 3 decimals. If it is 0.000 in the statistical software, report it as p<0.001. Round all p values on 3 decimals, even when the third decimal is 0, in the whole manuscript and tables also. Table 1. Please correct capital E into small letter e in the second column “Neurotrophic keratopathy eyes” Table 2. Report p value for comparing all measurements pre, 1 month, 3 months, 6 months, 9 months, and 12 months for NK grade. Line 220-221: Commas missed in the sentence: “…(0.52, 2.59), respectively, and at one year follow up were (1.62,8.17); (9.52,17.09); (-0.39, 2.89); (1.67,5.14), respectively”. Please add. Line 230: bracket missed in the sentence: “However, two patients (one was of 27-year old with a history of nasal aspergillosis and the other one was 74-year-old with no systemic co-morbidity) had reactivation of viral keratitis 3 and 6 months post-surgery, respectively.” Discussion: Please remove p values obtained in your research from this section and reword sentences with p values within to fit well the rest of the text. Figure 5. I am concerned about the resolution of this figure. Please make it better. It is unreadable now. Instead of making one, submit 5 figures separately. Figure 5. Please enlarge the resolution of this figure. It is not good enough. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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PONE-D-23-06245R1Clinical Outcomes of Corneal Neurotization Using Sural Nerve Graft in Neurotrophic KeratopathyPLOS ONE Dear Dr. Jain, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Sep 21 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Bhavana Sharma, MS Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Additional Editor Comments: Authors are requested further , to do necessary corrections/modifications as desired by reviewers . [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: (No Response) Reviewer #3: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #3: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #3: No ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #3: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #3: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Table 3 better report median (IQR or min max) since nonparametric method was used. Flowchart, there are still two arms. This is one-arm study. Two-arm chart usually refers to two treatment groups. The one year follow up box should be put underneath the 6 month box in one line. Reviewer #3: I thank the authors for their revised manuscript. They did an extensive rework and they achieved a significant improvement, but there is more that can be done in order to improve the quality of this manuscript. The main requirement is regarding the statistical subsection. Fisher`s exact test is recommended for categorical data, and NK grade severity is ordinal, so the more suitable statistical method in the before-after empirical situation is Wilcoxon signed rank test. So, there is need to reword the part of statistical analysis that talks about the usage of Wilcoxon signed rank test like this: “Wilcoxon signed rank test was used for …” and to change the results regarding NK grade severity and follow-up. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #3: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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Clinical Outcomes of Corneal Neurotization Using Sural Nerve Graft in Neurotrophic Keratopathy PONE-D-23-06245R2 Dear Dr. Jain We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Bhavana Sharma, MS MAMS Academic Editor PLOS ONE Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No ********** |
| Formally Accepted |
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PONE-D-23-06245R2 Clinical Outcomes of Corneal Neurotization Using Sural Nerve Graft in Neurotrophic Keratopathy Dear Dr. Jain: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Bhavana Sharma Academic Editor PLOS ONE |
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