Peer Review History
| Original SubmissionJuly 6, 2023 |
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PONE-D-23-21061Long-term effects of buried vertebrate carcasses on soil biogeochemistry in the Northern Great PlainsPLOS ONE Dear Dr. Keenan, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Both reviews are positive. Reviewer 1 suggests that more could be done with the microbial data. Reviewer 2 provides a list of needed changes and corrections. Please address each of the comments while making your revisions. If you are unable to provide additional results from the microbial data, please explain why in the manuscript. Please submit your revised manuscript by Oct 05 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors present a very well written study that explores the impacts of vertebrate decomposition over a temporal scale not commonly published. The results relating to isotopic changes over time were particularly interesting, though overall I thought that the microbial changes could have been better investigated. Reviewer #2: Review of “Long term effects of buried vertebrate carcasses on soil biogeochemistry in the northern great plains”. Summary: This manuscript describes a study on soil changes associated with the decomposition of vertebrate remains 21 years after burial. A range of physicochemical measures were made at different depths above and below the remains, and compared with a nearby control site at equivalent depths. Key findings relate to pH, phosphorus, and C/N isotopes, and some interpretation of these findings are provided in the discussion. Overall review: I found this paper to be very well written and easy to read. It covers a fascinating topic (heterotrophic decomposition) and addresses a neglected area of study in this particular field (soil). My opinion is that this work should be published, and it will likely be of interested to many ecologists and soil scientists worldwide. The study is largely fine as is (but see comments on interaction terms), and my comments below are suggestions for the author’s consideration only. • LL30/31 specify that P concentrations relate to your acid extractions • L106 whats the difference between duration and longevity? • L265 should this be “mean ‘and’ standard deviation”? • L270 you explain that you conducted PCA first, then your ANOVAs, but your results report ANOVAs first, then PCAs. I suggest presenting your PCA results first to be consistent with your methods. • L275 a two-way ANOVA is fine, but this should also include the interaction term treatment*depth, yes? I cant see this reported in your results section. To me, this is an important oversight, as several of your plots show a likely significant interaction term, despite no main effect of treatment. For example, Figure 7 shows that P has a higher [] at depth for your carcass site – I would expect this to be shown in a significant interaction term but its not reported, why? • L329 change to past tense – “this was not significant”. • L375 as above – where is the interaction term? The difference between the treatments might not be significant, sure, but this will be dependent on the depth. • LL480-490 very nice discussion of your P results. Interesting stuff. • Table 1 – why these “selected” studies and not others? It seems like there is an opportunity here to provide a more comprehensive and up-to-date list. Excluding forensic studies (i.e. pigs and humans), I can think of maybe another 5 or 6 surface soil studies using a range of carcass types (rabbits, deer etc) from around the world. • Figure 1 is excellent. A nice diagram with good predictions. • Figs 6 + 7, see comment above regarding interaction terms. These should be reported first where significant, then main effects of treatment of depth reported second. • Figure 8, as noted above, your PCA ordination plot should be presented before your ANOVA results to be consistent with your methods. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: Yes: Philip Barton ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Long-term effects of buried vertebrate carcasses on soil biogeochemistry in the Northern Great Plains PONE-D-23-21061R1 Dear Dr. Keenan, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, John P. Hart, Ph.D. Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #2: Revisions have been made appropriately. A nice study that will add some important new information to the field. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #2: Yes: Philip Barton ********** |
| Formally Accepted |
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PONE-D-23-21061R1 Long-term effects of buried vertebrate carcasses on soil biogeochemistry in the Northern Great Plains Dear Dr. Keenan: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. John P. Hart Academic Editor PLOS ONE |
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