Peer Review History
| Original SubmissionApril 6, 2023 |
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PONE-D-23-10162Protocol of the Budapest Sleep, Experiences, and Traits Study: an accessible resource for understanding associations between daily experiences, individual differences, and objectively measured sleepPLOS ONE Dear Dr. Péter, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. The article has been evaluated by two expert reviewers. Both believe that the proposed dataset may be of great interest to the research community. However, they are concerned about the bias of the dataset towards young, healthy university students. This may produce a significant bias in the data analysis and experience results. Please respond carefully to their comments and concerns, answering each comment and including in the text the missing information. Please submit your revised manuscript by Jul 01 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Should your manuscript be accepted for publication, we will hold it until you provide the relevant accession numbers or DOIs necessary to access your data. If you wish to make changes to your Data Availability statement, please describe these changes in your cover letter and we will update your Data Availability statement to reflect the information you provide. 4. We note that Figure 1 in your submission contain copyrighted images. All PLOS content is published under the Creative Commons Attribution License (CC BY 4.0), which means that the manuscript, images, and Supporting Information files will be freely available online, and any third party is permitted to access, download, copy, distribute, and use these materials in any way, even commercially, with proper attribution. For more information, see our copyright guidelines: http://journals.plos.org/plosone/s/licenses-and-copyright. We require you to either (1) present written permission from the copyright holder to publish these figures specifically under the CC BY 4.0 license, or (2) remove the figures from your submission: (1) You may seek permission from the original copyright holder of Figure 1 to publish the content specifically under the CC BY 4.0 license. We recommend that you contact the original copyright holder with the Content Permission Form (http://journals.plos.org/plosone/s/file?id=7c09/content-permission-form.pdf) and the following text: “I request permission for the open-access journal PLOS ONE to publish XXX under the Creative Commons Attribution License (CCAL) CC BY 4.0 (http://creativecommons.org/licenses/by/4.0/). Please be aware that this license allows unrestricted use and distribution, even commercially, by third parties. Please reply and provide explicit written permission to publish XXX under a CC BY license and complete the attached form.” Please upload the completed Content Permission Form or other proof of granted permissions as an ""Other"" file with your submission. In the figure caption of the copyrighted figure, please include the following text: “Reprinted from [ref] under a CC BY license, with permission from [name of publisher], original copyright [original copyright year].” (2) If you are unable to obtain permission from the original copyright holder to publish these figures under the CC BY 4.0 license or if the copyright holder’s requirements are incompatible with the CC BY 4.0 license, please either i) remove the figure or ii) supply a replacement figure that complies with the CC BY 4.0 license. Please check copyright information on all replacement figures and update the figure caption with source information. If applicable, please specify in the figure caption text when a figure is similar but not identical to the original image and is therefore for illustrative purposes only. Additional Editor Comments: From the editor's perspective, I suggest including a proof-of-principle analysis using at least one of the examples of research opportunities described in section 4.2. This can be of great use in demonstrating the enormous potential of the collected dataset. Moreover, I recommend that you carefully review the manuscript to improve readability. - Please avoid the excessive use of parentheses, as they reduce the overall reading flow. Instead, whenever possible, spell out the content of the text. - Check carefully for typos and errors. For example, a parenthesis is missing in "(i.e. media and private companies.)", while parentheses are duplicated in "(i.e. media and private companies.)". - Define acronyms the first time they are used. Then, use the acronyms. For example, the definition of AED is duplicated in the introduction, while PSG, REM, EEG, and IRB are not defined. - Avoid excessive use of parentheses. Instead, explain the content in the text. - It is worth reporting the total number of participants with a complete data set (good quality EEG, completed sleep diary and completed daily experience diary) for 7 consecutive nights. - Check that all labels and legends are visible in the figures. In Figure 3 they are not. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions? The research question outlined is expected to address a valid academic problem or topic and contribute to the base of knowledge in the field. Reviewer #1: Partly Reviewer #2: Yes ********** 2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses? The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory. Reviewer #1: Partly Reviewer #2: Partly ********** 3. Is the methodology feasible and described in sufficient detail to allow the work to be replicable? Descriptions of methods and materials in the protocol should be reported in sufficient detail for another researcher to reproduce all experiments and analyses. The protocol should describe the appropriate controls, sample size calculations, and replication needed to ensure that the data are robust and reproducible. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors described where all data underlying the findings will be made available when the study is complete? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception, at the time of publication. The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics. You may also provide optional suggestions and comments to authors that they might find helpful in planning their study. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: This study presents an ecological dataset focusing on sleep, daily activities/experiences, and psychophysiological measures, with the aim of investigating multidirectional relationships between these variables. A total of 208 healthy subjects were enrolled and longitudinally followed for seven days, with semiquantitative and subjective measures of psychological traits, sleep quality, and daily activities/experiences collected each day using standardized tests, diaries, and questionnaires. Objective measures were also gathered through a portable EEG device that was previously tested, allowing for overnight monitoring of sleep. The authors discussed the demographic features of participants and addressed technical challenges associated with portable EEG recordings to obtain objective data on sleep. Finally, they discussed the potential applications of the proposed dataset for future research, highlighting the importance of investigating the relationships between sleep, daily activities and experiences, and psychophysiological traits. Overall, the study provides a valuable dataset that can be particularly useful for future research. However, I have some major concerns to be addressed: - The participants in the study are overwhelmingly young, with the majority being under 25 years old. Therefore, the study cohort is not representative of the population in which specific sleep disorders are more commonly present. This is a relevant limitation that should be better examined. - The enrollment of a large number of university students as the majority of the study population, as well as the involvement of individuals belonging to the same family unit, may represent a significant bias in the study due to the sharing of demographic characteristics and lifestyle habits, possibly affecting experimental findings. - The results regarding the measurements of psychological traits, subjective measures of sleep, and daily activities/experiences are completely absent in the text. - The manuscript would benefit from concise writing, as it can be verbose and occasionally repetitive. For instance, the first paragraph of the discussion reiterates background information that was already introduced in the introduction. Additionally, although lengthy, the introduction does not provide a state-of-the-art overview of the main topic of the study, namely the relationships between sleep, psychological traits, and daily activities, but is rather focused on numerous methodological details. - The study abstract and introduction should clearly state that the purpose of the study is to present a dataset and not to investigate the relationship between the variables included in the dataset (sleep, psychological traits, and daily activities). - The high compliance of study participants can be explained by the involvement of young individuals who are familiar with the use of technological instrumentation. The approach used in this study may not be easily applicable to a population of elderly subjects. Please discuss. - The authors should expand the discussion of the data. In particular, I suggest considering the application of the proposed methodological approach in specific pathological conditions as a possible perspective. Reviewer #2: The Authors present an experimental protocol specifically design to construct a complete dataset which would allow for the investigation of daily experiences, psychological traits and their relation to quantitative (and qualitative) sleep metrics - the latter retrieved from qEEG and subjective assessments. The aim of the study is clearly stated and the paper is well-organised. However, I have a few remarks regarding the methodology, which I believe could be addressed during the manuscript revision; you may find them in the following. (1) As you stated, the Data Acquisition process is still ongoing and will be complete within the next few months. As pointed out in paragraph 2.1, the sample population includes mainly young participants. Different age ranges result in various daily-activity habits and experiences, and may result in different quantitative sleep metrics or sleep fragmentation patterns. Do you plan on extending the dataset by including a higher number of participants of different/higher age? If not, could you please discuss the limitations that this population bias may lead to? (2) The presented questionnaires (Sect. 2.3.2) are well designed. However, did you investigate the amount of caffeine intake, the presence of medication of any kind (targeting cardiovascular or breathing disorders, neurological disorders, psychological disorders) or the presence of familiarity with any neurological disorder? Cardiovascular impairment or neurological disorders may significantly impact the sleep pattern, resulting in higher presence of spindles, arousals or high sleep fragmentation. Please discuss. (3) In Section 2.3.3. the PSD is introduced as elected quantitative metric for the evaluation of qEEG. Later on, in Section 4.3, you mention that the lack of central channels may lead to an underestimation of the presence/number of sleep spindles (and sigma rhythm). In view of this, does the PSD still remain a reliable metric, or there may be the need for including other quantitative assessments retrieved from the EEG? Indeed, morphological (i.e., time-domain) characteristics are also widely investigated in literature. I believe this is a key point to be discussed. I hope these remarks may be positively addressed in the revised version of the manuscript. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. 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| Revision 1 |
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Protocol of the Budapest Sleep, Experiences, and Traits Study: an accessible resource for understanding associations between daily experiences, individual differences, and objectively measured sleep PONE-D-23-10162R1 Dear Dr. Péter, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Luigi Borzì, Ph.D. Academic Editor PLOS ONE Additional Editor Comments (optional): The authors have carefully addressed all the comments and suggestions from the Reviewers and the Editor. The manuscript can now be accepted for publication. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions? The research question outlined is expected to address a valid academic problem or topic and contribute to the base of knowledge in the field. Reviewer #1: Yes Reviewer #2: Partly ********** 2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses? The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory. Reviewer #1: Yes Reviewer #2: Partly ********** 3. Is the methodology feasible and described in sufficient detail to allow the work to be replicable? Descriptions of methods and materials in the protocol should be reported in sufficient detail for another researcher to reproduce all experiments and analyses. The protocol should describe the appropriate controls, sample size calculations, and replication needed to ensure that the data are robust and reproducible. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors described where all data underlying the findings will be made available when the study is complete? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception, at the time of publication. The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics. You may also provide optional suggestions and comments to authors that they might find helpful in planning their study. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors properly addressed the reviewer's concerns. Accordingly, I do not have additional comments. Reviewer #2: The Authors have carefully revised the article according to the Reviewers' response, and the structure and technical details are improved. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** |
| Formally Accepted |
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PONE-D-23-10162R1 Protocol of the Budapest Sleep, Experiences, and Traits Study: an accessible resource for understanding associations between daily experiences, individual differences, and objectively measured sleep Dear Dr. Ujma: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Luigi Borzì Academic Editor PLOS ONE |
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