Peer Review History
| Original SubmissionFebruary 16, 2023 |
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PONE-D-23-04666Evaluation of the influence of correcting for gillnet selectivity on the estimation of population parametersPLOS ONE Dear Dr. Klein, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by May 04 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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We will update your Data Availability statement to reflect the information you provide in your cover letter. 3. We note that you have stated that you will provide repository information for your data at acceptance. Should your manuscript be accepted for publication, we will hold it until you provide the relevant accession numbers or DOIs necessary to access your data. If you wish to make changes to your Data Availability statement, please describe these changes in your cover letter and we will update your Data Availability statement to reflect the information you provide. 4. Please ensure that you include a title page within your main document. You should list all authors and all affiliations as per our author instructions and clearly indicate the corresponding author. Additional Editor Comments: The article can not be accepted in its present form . So author are suggested to resubmit it as major revisions. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Numbers are showing along the margin continuosly which is not necessory and one place and along with coma(,) should be remove and should be clealyr mention of Figure and figs numbers while work is informative for the sustainable fisheries management. Reviewer #2: Major comments 1) More detail needs to be added in the Methods and Results. Much of the text is vague and not detailed enough to be repeated. Specific examples are included in the minor comments below. 2) All Table and Figure captions need to be more detailed. The caption text needs to be stand-alone whereby a reader could read the caption and understand what you are presenting without needing to read the entire text. 3) The authors use only one group of population parameters for each species for their simulations. Fish populations are not uniform across water bodies which limits the understanding of how the analysis can influence different types of populations. It would be more valuable and informative to simulate different types of populations for each species (high size structure, average size structure, low size structure) in relation to mesh size used. One would expect more extreme biases in the population parameters when there is a mismatch of size structure and mesh size. 4) Much of the effectiveness of using gillnets (and all sampling gear) is that they are used effectively in relation to fish behavior to maximize catches, for example the season set, the habitat they are used in, the orientation of the nets (horizontal versus vertical). The authors briefly mention the issues with gillnet encounter probability and gillnet retention in the discussion (lines 298-315) but there should be some mention of this in the methods. Mainly that these issues exist and are a primary consideration of the gear but are outside the scope of this manuscript or too difficult to include in the simulation. So all simulations were conducted assuming optimal gill net sampling seasonality and habitat placement for the species in question to maximize encounter probability. Then assuming that encounter probability was strictly related to fish movement/swim speed, etc. Minor comments line 129-130 and throughout this paragraph: Be sure to cite table 1 where appropriate to connect this text to the actual values used. line 153: why 150 fish in the sample? was there a power analysis or something associated with this sample size that met some criteria? Did you test for the effect of larger or smaller sample size and how this could effect your results? Table 2: the parameters in these selectivity curves need to be defined. You provide the values in the table but the letter and symbols represent. line 175-177: There is literature that discusses swimming speed for these species. Examples below. If this information isn't adequate for your needs you need to specify why and not say that it isn't available. Peake et al. https://doi.org/10.1139/z00-097 for swimming speed of walleye. Gaston thesis for crappie https://egrove.olemiss.edu/etd/118/. Channel catfish https://journals.biologists.com/jeb/article/220/4/597/18666/Physostomous-channel-catfish-Ictalurus-punctatus Lake trout https://doi.org/10.1577/T08-174.1 https://doi.org/10.1111/j.1095-8649.2000.tb00259.x line 183: The mesh sizes that were simulated here should be discussed in more detail. Mesh size would have a large impact on retention. There needs to be more information here. Retention probability would also not be related to length alone but fish shape and other morphometrics. For example, head size and gill size relative to body size would make crappie retention and susceptibility to different mesh sizes very different than that of walleye. Additionally, channel catfish pectoral spine and spine locking may influence their gill net selection and retention differently relative to body size than for lake trout or walleye. This concept of retention should be expanded or at least considered in how body shape influences retention and ultimately your simulation results. line 196: what were the age class sample size cutoffs considered here? be sure to be specific about these things. The same with von Bertalanffy model, mention the length bin sample cutoffs that were used (5 per length bin, 8, 10?). What was the requirement? line 205: also cite all the R packages that were used. line 215: how did mesh size play a role in this result? Its unclear at this point how mesh size was included in the simulations. lines 224 - 227: Throughout the results, be sure to back up your statements with statistical output, values or citation of a figure. Text statements alone are not adequate. line 229 - 231: How relevant are these small changes? It would help put this into context for the reader to explain the length at age output for these differences in L infinite or K. For example, "K increased from 0.2699 to 0.2709... These minor changes in K did not result in a difference in estimated length-at-age of channel catfish. A 4 year old catfish with a K of 0.2699 was estimated to be 7.0 inches whereas a 4 year old catfish with a K of 0.2709 was estimated to be 7.1 inches." Making that up of course but hopefully you get where I'm going. line 208, 257, 261 as examples: be consistent with terminology. Figure, Fig. or Figs.? pick one style of formatting and stick with it. line 269: 'minor' is vague. These are your results, be specific, provide values. line 324: This walleye result wasn't stated in the results? Make sure everything is reported in the results. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Dr. Veerendra Singh Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Evaluation of the influence of correcting for gillnet selectivity on the estimation of population parameters PONE-D-23-04666R1 Dear Dr. Klein, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Dharmendra Kumar Meena Academic Editor PLOS ONE Additional Editor Comments (optional): The article can be accepted provided with completion of the minor revisions as suggested by the reviewer. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #3: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #3: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #3: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #3: (No Response) ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #3: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: As we know that Gill Net is passive gear and it's have so many types or forms of itself like as triple wall or trammel net or bottom set gill net so which kind of gill net you have used for the study of growth parameters or mortality please mention it and bell shape curve is assumed for the lake trout only and for others species it's show irregularities and when we use age data for the estimation of Total Mortalities then it only applicable for tropical species. Reviewer #3: 1. References in list and in text should be as per journal format. Ensure the same. 2. In the methods section, authors need to mention their type of sampling, whether random, purposive??? 3. The authors need to justify how their sample size (150 in the present case) is enough for the present study and to arrive at definite conclusions. 4. Conclusion section to be added based on the findings. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Dr. Veerendra Singh Reviewer #3: No ********** |
| Formally Accepted |
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PONE-D-23-04666R1 Evaluation of the influence of correcting for gillnet selectivity on the estimation of population parameters Dear Dr. Klein: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Dharmendra Kumar Meena Academic Editor PLOS ONE |
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