Peer Review History
| Original SubmissionSeptember 25, 2022 |
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PONE-D-22-25271 Two decades of change in sea star abundance at a subtidal site in Puget Sound, Washington PLOS ONE Dear Dr. Casendino, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. The two reviewers have made many good suggestions for improving your manuscript. I'll point out that both of them were not satisfied with lumping everything into total sea stars, and wanted species specific trends wherever possible. Given the low densities (Table 2), the absolute numbers must be low also. A figure with the species-specific numbers could be a good idea. The Github link to the data that you provided isn't complete, so I couldn't look at the direct numbers. If I am doing the math correctly converting from Table 2, lots of those values are 1, 2, etc. I wonder if you could do some kind of heat map with the absolute values? That might be an easier way to display the species-specific trends in an informative manner. Please submit your revised manuscript by Mar 31 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). 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You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors explore the change in total catch of sea stars from a range of depths at a single site over 22 years. It is an impressive time-series, that explores changes in a group of species over a time period with a known disease epidemic. They find that there were marked declines in total catch of sea stars in 2006 and 2015, with some variability in declines across depths. My main issue is that the analysis and results for this manuscript focus on ‘total sea star catch’. While I think this can be an interesting question and a different way to look at the trends over time, the multitude of relevant phenotypic differences between the sea stars included in this metric makes it important to be careful in how the results are interpreted. In the species included we have a wide range of average density, rarity, susceptibility to disease, trophic level, competitive ability, etc. In many cases these species are known to interact, and particularly known to interact around responses to sea star wasting disease. I still think that this work is important and should be shared, but I think that there should be some substantial editing to the framing around the work. I have highlighted specific sections below in the line edits where changes could be made to address this issue. Line edits: Line 33-37- While these results do indicate that the pattern is for ‘overall abundance of sea stars’, I think you need to be clear in the methods that this measure comes from trends that are measuring the ‘total catch’. It would be possible to make these same statements and have underlying data that was analyzed by species, and that was the assumption that I made on my first read through the abstract. It left me startled when I first looked at your methods and results. Line 65 – a technical point, but you should use the term ‘signs of disease’ instead of symptoms here. Symptoms are reported, and since invertebrates can’t report, they can’t have symptoms. Line 98-100- it seems like a citation or two would be appropriate here Line 117 – between the two sentences on this line, you should clarify that you will be looking at the community as a whole (total catch) and how this will influence the hypotheses you lay out afterwards. Specifically, I think it would be worth mentioning why you would expect the whole community abundance to go down, when not all species were equally affected by SSWD. That could still be a viable hypothesis, but would require the assumption that the dominant species of the communities surveyed were most responsive to SSWD (which certainly is possible). Line 172 – I am surprised to see that all sea stars were lumped into one category here (total catch), especially since they were identified to species (line 143-144). I appreciate that you likely don’t have enough observations of each species to do this analysis by species, but I think the choice to lump all sea stars together needs to be defended and discussed in the methods. I also think it should be introduced in the methods more explicitly, and the consequences of the lumping explored. How the total catch of sea stars is changing over time is a legitimate and interesting question, but is fundamentally different from how each species responded. Line 271 – I think rephrasing this to indicate that when you evaluated across all depths you found a changepoint in 2006. At the moment this statement could indicate that you found that change point in each individual depth, which the next sentences clarify that you don’t. Line 282-287 – there needs to be some discussion here of the fact that you have lumped all sea stars into one category, so the variable responses to wasting might be swamping out the signal. I recognize that you go on in the discussion to discuss the influence of the different species on the response, but I think you need something in this first paragraph to clarify what inference we can take away from these patterns. Line 302-303 – I think a sentence similar to this should also be in the methods, explaining why you chose to look at catch instead of individual species response. Line 352-362 – I think it should at least be acknowledged that there is some chance that the decrease in abundance over time could be related to the repeated bottom trawling over years in this location. Table 2 – I doubt that this strongly influenced your results, but it’s a little odd that you’ve lumped a brittle star (Amphipholis pugetana) in with your total sea star catch. If you are going to keep the brittle star in the data, it should be noted in the methods that you have total asteroid and ophiuroid catch. Assuming of course that you would have identified any brittle star that was caught and that the only one collected was this species. Reviewer #2: Review of Casendino – PONE-D-22-2571 “Two decades of change in sea star abundance at a subtidal site in Puget Sound, Washington” General comments: This study benefits from three key aspects. First, as the author’s point out, it leverages a rare and fortunate long-term timeseries. Secondly, the analyses are excellent. Third, it is an impressive use of a dataset generated from a field sampling project for a course. However, the study suffers from writing that doesn’t provide a strong conceptual motivation, and insufficient depth and breadth to provide a convincing story. Taken on face value (i.e. trends in all species combined), the analyses strongly suggest that factors other than SSWD are responsible for the trajectories of sea stars across depths over time. If the authors quantitatively evaluated these alternative explanations and found stronger relationships, this argument would not only be more compelling, but also be the basis of an interesting story, which is exactly how they close the Discussion section. This could have been the overarching theme of the article, “Contrary to other regions of the West Coast-wide SSWD epidemic, other potential environmental drivers (potential because they are all correlative), overwhelm the relative impact of SSWD in an assemblage of sea stars in Puget Sound.” That is a very interesting results, but requires more analyses. The other problem I have with the manuscript is the lack of information (temporal trends by depth) for each species. Yes, they are insufficient for rigorous statistical analysis, but not knowing how the different species are potentially contributing to trends is extremely frustrating. The authors are not providing information at the species level that readers would find intriguing. Overall, because the manuscript describes a very localized phenomenon with little broader conceptual contributions, I think the manuscript is more appropriate for a more regional or disciplinary-focused journal. A marine or environmental journal whose readers would appreciate that wide-scale manifestations of a disease were overwhelmed locally by environmental degradation is something I’d be keen to cite. Specific comments: Introduction I deeply appreciate the emphasis on the value of long-term data sets, but it is not the point of the article. Start the Intro focused on the greater conceptual issue. If the overall conclusion is how local environmental conditions can overwhelm the effects of otherwise disastrous widescale perturbations like epidemics, start with that and how this knowledge advances our understanding of the causes of spatial variation in such perturbations. Certainly include the point of how long term datasets are central to addressing this issue and also consider additional citations. Especially look for the most recent articles by Lindenmayer: - Hughes, B.B., Beas-Luna, R., Barner, A.K., Brewitt, K., Brumbaugh, D.R., Cerny-Chipman, E.B., Close, S.L., Coblentz, K.E., De Nesnera, K.L., Drobnitch, S.T. and Figurski, J.D., 2017. Long-term studies contribute disproportionately to ecology and policy. BioScience, 67(3), pp.271-281. - Lindenmayer DB, Likens GE, Krebs CJ, Hobbs RJ. 2010. Improved probability of detection of ecological “surprises.” Proceedings of the National Academy of Sciences 107: 21957–21962. - Lindenmayer DB, et al. 2012. Value of long-term ecological studies. Austral Ecology 37: 745–757. The purpose of the paragraphs describing the significance of the SSWD should be terse and describe the timing, geographic scope and species impacted, pointing out that it occurred in the intertidal and subtidal. Point made and no greater detail is necessary. There are several articles that describe this phenomenon for subtidal (especially, P. helanthoides) ecosystems, even though they also draw attention to the role of the MHW. They should be cited as they contribute to geographic scope and ecological consequences associated, in part, to SSWD. - McPherson, M.L., Finger, D.J., Houskeeper, H.F., Bell, T.W., Carr, M.H., Rogers-Bennett, L. and Kudela, R.M., 2021. Large-scale shift in the structure of a kelp forest ecosystem co-occurs with an epizootic and marine heatwave. Communications biology, 4(1), pp.1-9. - Smith, J.G., Tomoleoni, J., Staedler, M., Lyon, S., Fujii, J. and Tinker, M.T., 2021. Behavioral responses across a mosaic of ecosystem states restructure a sea otter–urchin trophic cascade. Proceedings of the National Academy of Sciences, 118(11), p.e2012493118. - Line 77- “Eisenlord et al. (2016) tracked 78 SSWD prevalence in P. ochraceus in Washington State from December 2013 to July 2015 [17].” Summarize this entire study in 1-2 sentences as one of several examples of spatial variation in the population consequence of SSWD, which is the key point of this article (i.e. that it was not manifest strongly at the study site). Methods Line 139; “Each year, five trawls took place at each depth, 140 corresponding to discrete time periods: early morning (~6:00–8:00), morning (~10:00–12:00), 141 afternoon (~15:00–17:00), evening (~20:00–22:00), and night (~1:00–3:00). Each trawl sampled 142 benthic habitat for ~5 min over 370 m (range = 367 to 538 m).” Please make clearer the spatial distribution of transects. Was essentially the same transect area sampled repeatedly over time on a sampling day, or was the location of the transects at a given depth stratum offset so as not to sample the very same area over time? We’re you depleting the stars over the sequence of the samples and summing them across samples? Did catch at each depth decline over the day? Results Table 2: “listed in order of overall abundance”. To make this more obvious and informative, add a column for mean abundance across all depth strata for each species. Line 299: “The presence of relatively resilient D. imbricata in shallow subtidal depths alone may also have offset localized mortality rates, perhaps explaining why high abundances of P. helianthoides (and SSWD-associated mortality) in the shallow subtidal were not associated with more drastic declines in those depths. Unfortunately, replication at the level of species was insufficient to test for species-specific trends in our dataset.” Yes, you can’t statistically evaluate change for each species by depth, but not seeing graphically how each species changed at each depth doesn’t allow the reader (or you) to evaluate the potential contributions of each species to the trends of combined species and that is frustrating. You need to make supplemental graphs of the trends in density for each species by each depth stratum. As the authors indicate, P. helianthoides might have tanked at shallower depths but it is masked by lack of change in D. imbricata. Readers need to see the trends for each species, as poor as they are because of such low densities, to interpret the trends in the combined species. Line 325: “In the context of these reports, our 326 results strongly suggest a lagged onset of SSWD-associated mortality at Port Madison.” But again, it is frustrating not to know which species contributed most to this pattern. What if the major contributors were species thought not to be susceptible to SSWD? Line 335: “… suggesting that declines may have resulted from a deleterious environmental variable. Since 1999, the frequency of phytoplankton blooms and average chlorophyll-a in Puget Sound have declined;…” An analysis of how well these other environmental variables explained the observed population trend would be very interesting. The take home of such a study would be “Yeah, SSWD was devastating in many parts of the West Coast, but environmental degradation (or natural long-term trends) in Puget Sound overwhelmed such effects!”. That’s interesting! Line 343: “we expected high temperatures to be correlated with low sea star density…” Yes, but your points as to why higher temps could be detrimental (e.g.,. hypoxia) beg the question of whether any species were migrating across depth zones either to avoid detrimental conditions or in pursuit of more beneficial conditions (prey availability). How species number changed across depth zones over time would be interesting and might explain these surprising relationships. Line 367: This work suggests that subtidal sea star communities experienced gradual and steep declines not strictly attributable to the SSWD epizootic of 2013, warranting further examination of other external threats posed to such communities in the Salish Sea.” That says it all, and should be the title and point of this article. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). 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Two decades of change in sea star abundance at a subtidal site in Puget Sound, Washington PONE-D-22-25271R1 Dear Dr. Casendino, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Erik V. Thuesen, Ph.D. Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-22-25271R1 Two decades of change in sea star abundance at a subtidal site in Puget Sound, Washington Dear Dr. Casendino: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Erik V. Thuesen Academic Editor PLOS ONE |
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