Peer Review History
| Original SubmissionDecember 22, 2022 |
|---|
|
PONE-D-22-35050A simple method to isolate fatty acids and fatty alcohols from wax esters in a wax-ester rich marine oilPLOS ONE Dear Dr. Schots, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. As you may see below, there are significant concerns raised by the reviewers, in particular, on replication, and comparison with existing methods. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Mar 24 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Rishiram Ramanan Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. In your Data Availability statement, you have not specified where the minimal data set underlying the results described in your manuscript can be found. PLOS defines a study's minimal data set as the underlying data used to reach the conclusions drawn in the manuscript and any additional data required to replicate the reported study findings in their entirety. All PLOS journals require that the minimal data set be made fully available. For more information about our data policy, please see http://journals.plos.org/plosone/s/data-availability. Upon re-submitting your revised manuscript, please upload your study’s minimal underlying data set as either Supporting Information files or to a stable, public repository and include the relevant URLs, DOIs, or accession numbers within your revised cover letter. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. Any potentially identifying patient information must be fully anonymized. Important: If there are ethical or legal restrictions to sharing your data publicly, please explain these restrictions in detail. Please see our guidelines for more information on what we consider unacceptable restrictions to publicly sharing data: http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. Note that it is not acceptable for the authors to be the sole named individuals responsible for ensuring data access. We will update your Data Availability statement to reflect the information you provide in your cover letter. 3. PLOS ONE now requires that authors provide the original uncropped and unadjusted images underlying all blot or gel results reported in a submission’s figures or Supporting Information files. This policy and the journal’s other requirements for blot/gel reporting and figure preparation are described in detail at https://journals.plos.org/plosone/s/figures#loc-blot-and-gel-reporting-requirements and https://journals.plos.org/plosone/s/figures#loc-preparing-figures-from-image-files. When you submit your revised manuscript, please ensure that your figures adhere fully to these guidelines and provide the original underlying images for all blot or gel data reported in your submission. See the following link for instructions on providing the original image data: https://journals.plos.org/plosone/s/figures#loc-original-images-for-blots-and-gels.
In your cover letter, please note whether your blot/gel image data are in Supporting Information or posted at a public data repository, provide the repository URL if relevant, and provide specific details as to which raw blot/gel images, if any, are not available. Email us at plosone@plos.org if you have any questions. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: No Reviewer #2: Yes Reviewer #3: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: N/A Reviewer #3: N/A ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The manuscript presents a simplified method to isolate fatty acids and fatty alcohols from a wax ester obtained from a zooplankton rich in monounsaturated fatty acids using HPTLC. The method seems to be really simple and not expensive. The procedures were described step by step and can be useful for other researchers. However, there are some parts that should be revised. In general, there are several minor typos in the text. Line 107: Include the volume of wax esters in chloroform that resulted in 240 mg line 110 : it was described that the sample was kept at 90oC/90 min. Usually, an antioxidant uses to be added to avoid oxidative reaction at this step of the analysis. Lines 143-154: include the reference of this part. Line 157: It is important to detail which sub-type of standard was used to identify the fatty acids and fatty alcohols, since the information viable in the company web site has not been enough. What is Akvaplan-niva ? Table 1: It will be expected to have at least a triplicate of the assay. Without any replication it is not possible to obtain an error estimative. It is interesting to suggest what type of lipids correspond to the difference between waxe esters (239 mg) and neutral lipids (266 mg), and also between neutral lipids and calanus oil (300 mg). It is important to better discuss the advantages and limitations of this method compared with others. The manuscript is interesting but the lack of replication is not expected in an article about methodology alternatives. In addition, it is also expected a comparison with at least one classical method. Thus, it is necessary to include replicate and compare with results obtained from other method. Reviewer #2: The article describes a method for isolating free fatty acids and free fatty alcohols from wax esters of calanus oil. Although the paper is written very well and the descriptions are clear and sound, I doubt that the level of novelty justifies publication. The steps involved (extraction, saponification, SPE, checked by TLC) are well-described procedures for separating lipid classes and can be found in classic textbooks on lipid analysis (e.g. W.W.Christie…). Furthermore, if this paper is aiming to optimize such a procedure, I would expect some data on method development. The authors merely present data of the (hopefully) optimized method. For method development, it would be essential to know, how the targets were defined (purity, solvent efficiency) and how the optimum was approached. The authors claim that their method works without noticeable oxidation contrary to previous methods. How did the authors check this? I assume, that any oxidized fatty acid or alcohol would be retained in the SPE and thus noted as a reduced recovery. As a minor comment, I wonder why the authors did not try to separate FFA from fatty alcohols as a soap before re-acidifying, instead of a SPE, given the fact that both molecular classes have similar polarities. At least this should be discussed. Reviewer #3: The authors describe the preparation of mixtures of fatty acids and fatty alcohol from waxes present in Calanus finmarchicus oil. They propose the use of SPE columns to purify and isolate the waxes, followed by a basic hydrolysis with ethanol and NaOH. The main concerns relate to the methodology used and some of the results described (see specific comments). Specific comments: 1.-Lines 64-65.- To study the health effects …it is necessary to separate the fatty acids and fatty alcohols ….. Why is it necessary? Provide a reference to support this claim. In any case, is the effect due to the functional class of each compound (alcohol or carboxylic acid) or to the presence of double bonds in the alkyl chain of both classes of compounds? 2.-Lines 66-67.- To our knowledge … no method … to separate the fatty acids and fatty alcohols … without the formation of FAMEs. What is the problem related to the preparation of FAMEs, the separation of the fatty alcohols from FAMEs and, finally, the recovery of fatty acids by hydrolyzing FAMEs? 3.- Lines 80-82.- … Phosphoric acid 99,99%, Potassium bicarbonate …..Toluene Chemical names should be written in lowercase unless they are located after a period. 4.- Lines 107-108.- …wax esters …. dissolved in …. 1 M ethanolic NaOH to a concentration of 5 mg/mL… There is an excess of ethanol related to the amount of water present (needed for the hydrolysis), do fatty ethyl esters not appear during this reaction? 5.- Various lines ..... minutes...hours …. Time units should be indicated according IS rules: min, h… 6.- Lines 185-187.- free fatty acids band appear to consist of two bands is probably due to different degrees of unsaturation…. The different chain length of each acid can also lead to this situation. Please add this to the manuscript. 7.- Lines 223-224.- Table 2 How was the initial content of fatty acids and fatty alcohols in the crude wax determined? How do the authors explain the differences between SFA, MUFA and PUFA for the fatty acids present in the wax and free fatty acids isolated after the SPE process and further saponification? How do the authors determine the relative content from fatty acids and fatty alcohols as a whole? Did they consider the different response factors of each in the GC? What is the fatty acid indicated (0.8 relative content) in the fatty alcohol section of the table? 8.- Figure 1 Did all SPE used contain the same chromatographic phase as described in line 88 (5 g Mega Bond Elute aminopropyl)? ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Inar Castro Erger Reviewer #2: No Reviewer #3: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
|
PONE-D-22-35050R1A simple method to isolate fatty acids and fatty alcohols from wax esters in a wax-ester rich marine oilPLOS ONE Dear Dr. Schots, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. The reviewers have largely agreed to accept the manuscript for publication except for a few minor edits. I invite the authors to submit the revised manuscript after addressing the reviewers' suggestions. Please submit your revised manuscript by May 28 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Rishiram Ramanan Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed Reviewer #3: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Partly ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: N/A Reviewer #3: N/A ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I only suggest two minor revisions. Line 60: making Line 122: It is important to include the authors answer in the text. For example: “No antioxidants were added during the wax esters hydrolysis because Calanus oil contains naturally the antioxidant astaxanthin”. Reviewer #2: In my view, the authors have clarified all points satisfactorily. There is just one point that popped in to my eyes: In the description of figures, it should read."...from bottom to top.." - not top to bottom (all figures and supportive figures) Reviewer #3: I consider that the authors have only partially addressed my previous comments. I attach a document with my considerations. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Inar Alves Castro Reviewer #2: No Reviewer #3: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
|
| Revision 2 |
|
A simple method to isolate fatty acids and fatty alcohols from wax esters in a wax-ester rich marine oil PONE-D-22-35050R2 Dear Dr. Schots, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Rishiram Ramanan Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
|
PONE-D-22-35050R2 A simple method to isolate fatty acids and fatty alcohols from wax esters in a wax-ester rich marine oil Dear Dr. Schots: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Rishiram Ramanan Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .