Peer Review History

Original SubmissionJune 18, 2022
Decision Letter - Ferdinando Carlo Sasso, Editor

PONE-D-22-17476Association of Ideal Cardiovascular Health Metrics with Incident Chronic Kidney Disease: more than a decade follow-up in the Tehran Lipid and Glucose Study (TLGS)PLOS ONE

Dear Dr. tohidi,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

ACADEMIC EDITOR:Please submit your revised manuscript by two weeks. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Ferdinando Carlo Sasso, PhD, MD

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at 

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https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

2. We note that your study is based on the clinical trials described in the references 20 and 21. Please provide the clinical trial registration numbers for these trials in your manuscript.

3. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match. 

When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section.

4. Thank you for stating the following financial disclosure: 

"This study was initially supported in part by grant No. 121 from the National Research Council of the Islamic Republic of Iran and then by grant No 30382 from the Shahid Beheshti University of Medical Sciences."

Please state what role the funders took in the study.  If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." 

If this statement is not correct you must amend it as needed. 

Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf.

5. Your ethics statement should only appear in the Methods section of your manuscript. If your ethics statement is written in any section besides the Methods, please move it to the Methods section and delete it from any other section. Please ensure that your ethics statement is included in your manuscript, as the ethics statement entered into the online submission form will not be published alongside your manuscript. 

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Partly

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: I Don't Know

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Alizadeh and colleagues carried out a prospective study examining the association between ideal cardiovascular health metrics and incident chronic kidney disease. In a cohort of 7388 patients, they found that ideal and intermediate categories of BMI, BP and ideal categories of FBP are associated with lower risk of incident CKD in middle-aged subjects while only intermediate and ideal categories of BP associated with lower CKD risk.

This manuscript could be of some interest, but I have several concerns. Briefly, my comments:

1) In the Abstract the following sentence needs to be rephrased because there are not only HR but also the percentage of risk reduction “the corresponding HRs (95% confidence intervals) were 13% (0.87, 0.77-0.99), 16% (0.84, 0.76-0.99), 21% (0.79, 0.68-0.93), 30% (0.70, 0.60-0.83) and 24% (0.76, 0.64-0.91)”. Furthermore, in the conclusion of abstract Authors stated that Results were found only in middle-aged while there are some findings also in elderly subjects. Abstract needs to be improved

2) In Methods Section, Authors indicated that at baseline in TLGS were excluded subjects without CKD, but definition of this disease is not only based on GFR but also urinary anomalies such as proteinuria and albuminuria. Could Authors exclude that, at baseline, patients had a significant proteinuria? This is a crucial point in the evaluation of incident CKD. If data on proteinuria were not available, I suggest referring to low eGFR (<60 ml/min) as outcome instead of CKD.

3) Creatinine levels were assessed by kinetic colorimetric Jaffè and not with enzymatic assay, but CKD-EPI formula was used to estimate GFR. The Authors did not perform a correction on creatinine values to use CKD-EPI formula. This could limit GFR evaluation. I suggest that Since creatinine was not standardized to isotope dilution mass spectrometry values, Authors could reduce creatinine values by 5% as indicated by Skali et al. and, after, could use CKD-EPI formula (PMID: 21884875)

4) Surprisingly, 68.3% of elderly subjects (>65 y) enrolled in the study developed incident CKD. I think that a selection bias could be the reason for this high incidence of CKD. Probably, Authors could limit the analyses on middle-aged population.

Reviewer #2: I’ve read with interest the draft “Association of ideal cardiovascular health metrics with incident chronic 2 kidney disease: more than a decade follow-up in the Tehran Lipid and 3 Glucose Study (TLGS)”, by Fatemeh Alizadeh, Maryam Tohidi, Mitra Hasheminia, Firoozeh Hosseini-Esfahani, Fereidoun Azizi, Farzad Hadaegh

However, some important issues have to be raised.

Introduction:

- Line 46-47. Authors should briefly introduce and define the main non-communicable diseases (NCDs).

- Line 65-66. A multifactorial treatment aimed at multiple risk factors reduces the risk of cardiovascular events in populations with type 2 diabetes mellitus and renal impairment. This issue is addressed in some recent literature which should be added to the references. Gaede P et al, N Engl J Med. 2003;348(5):383-393. doi:10.1056/NEJMoa021778; Sasso FC et al Cardiovasc Diabetol. 2021;20(1):145. Published 2021 Jul 16. doi:10.1186/s12933-021-01343-1

Methods and Materials:

- Line 128-129. Font typing error.

Discussion:

- Line 251. “china” is a typing error.

- Line 237-239. “Among middle-aged participants, the intermediate and ideal categories of BMI and BP, and the ideal category of FPG and in elderly individuals, only intermediate and ideal BP was associated with reduced risk of CKD”. The authors should better clarify the pathophysiological mechanisms/hypotheses supporting this sentence.

- Line 262. “Actually, no association was demonstrated between ICVHM and incident CKD among elder population”. It therefore seems that ICVHM does not affect the prognosis of elderly patients. However, some recent literature seems in contrast with this conclusion. The authors should better clarify the pathophysiological mechanisms/hypotheses supporting this sentence.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Revision 1

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

Response: Thank you, done.

2. We note that your study is based on the clinical trials described in the references 20 and 21. Please provide the clinical trial registration numbers for these trials in your manuscript.

Response: Agreed, done, the trial registration number (ISRCTN52588395) was added to the text. ” (page, line: 89)

3. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match.

When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section.

Response: Agreed, corrected. "This study was initially supported in part by grant No. 121 from the National Research Council of the Islamic Republic of Iran and then by grant No 30382 from the Shahid Beheshti University of Medical Sciences." ” (page, line: 100-103)

4. Please state what role the funders took in the study. If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."

If this statement is not correct you must amend it as needed.

Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf.

Response: The authors declare that they have no competing interests.

5. Your ethics statement should only appear in the Methods section of your manuscript. If your ethics statement is written in any section besides the Methods, please move it to the Methods section and delete it from any other section. Please ensure that your ethics statement is included in your manuscript, as the ethics statement entered into the online submission form will not be published alongside your manuscript.

Response: Agreed, the ethic statement and related approval number was mentioned in the Method section. ” (page, line: 100-103)

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Partly

________________________________________

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: I Don't Know

________________________________________

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

________________________________________

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

________________________________________

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Alizadeh and colleagues carried out a prospective study examining the association between ideal cardiovascular health metrics and incident chronic kidney disease. In a cohort of 7388 patients, they found that ideal and intermediate categories of BMI, BP and ideal categories of FBP are associated with lower risk of incident CKD in middle-aged subjects while only intermediate and ideal categories of BP associated with lower CKD risk.

This manuscript could be of some interest, but I have several concerns. Briefly, my comments:

1) In the Abstract the following sentence needs to be rephrased because there are not only HR but also the percentage of risk reduction “the corresponding HRs (95% confidence intervals) were 13% (0.87, 0.77-0.99), 16% (0.84, 0.76-0.99), 21% (0.79, 0.68-0.93), 30% (0.70, 0.60-0.83) and 24% (0.76, 0.64-0.91)”. Furthermore, in the conclusion of abstract Authors stated that Results were found only in middle-aged while there are some findings also in elderly subjects. Abstract needs to be improved

Response: The mentioned part of the abstract was rephrased as below: “the corresponding HRs (95% confidence intervals) were (0.87, 0.77-0.99), (0.84, 0.76-0.99), (0.79, 0.68-0.93), (0.70, 0.60-0.83) and (0.76, 0.64-0.91).” (page , line: 37-39)

2) In Methods Section, Authors indicated that at baseline in TLGS were excluded subjects without CKD, but definition of this disease is not only based on GFR but also urinary anomalies such as proteinuria and albuminuria. Could Authors exclude that, at baseline, patients had a significant proteinuria? This is a crucial point in the evaluation of incident CKD. If data on proteinuria were not available, I suggest referring to low eGFR (<60 ml/min) as outcome instead of CKD.

Response: Thank you for this valuable comment. Since, in this cohort study, assay for urine protein was not performed at baseline and follow-up and CKD was defined based on eGFR, we corrected the manuscript and Tables according to this comment.” (page , line: The whole text)

3) Creatinine levels were assessed by kinetic colorimetric Jaffè and not with enzymatic assay, but CKD-EPI formula was used to estimate GFR. The Authors did not perform a correction on creatinine values to use CKD-EPI formula. This could limit GFR evaluation. I suggest that Since creatinine was not standardized to isotope dilution mass spectrometry values, Authors could reduce creatinine values by 5% as indicated by Skali et al. and, after, could use CKD-EPI formula (PMID: 21884875)

Response: Agreed, this issue for correcting the creatinine levels that has been considered in the data analysis, was added to the text. ” (page, line: 135-137)

4) Surprisingly, 68.3% of elderly subjects (>65 y) enrolled in the study developed incident CKD. I think that a selection bias could be the reason for this high incidence of CKD. Probably, Authors could limit the analyses on middle-aged population.

Response: Agreed, All information related to age over 65 years was removed from the draft article.

Reviewer #2: I’ve read with interest the draft “Association of ideal cardiovascular health metrics with incident chronic 2 kidney disease: more than a decade follow-up in the Tehran Lipid and 3 Glucose Study (TLGS)”, by Fatemeh Alizadeh, Maryam Tohidi, Mitra Hasheminia, Firoozeh Hosseini-Esfahani, Fereidoun Azizi, Farzad Hadaegh

However, some important issues have to be raised.

Introduction :

- Line 46-47. Authors should briefly introduce and define the main non-communicable diseases (NCDs).

Response: The mentioned items were corrected. ” (page, line: 46-49)

- Line 65-66. A multifactorial treatment aimed at multiple risk factors reduces the risk of cardiovascular events in populations with type 2 diabetes mellitus and renal impairment. This issue is addressed in some recent literature which should be added to the references. Gaede P et al, N Engl J Med. 2003;348(5):383-393. doi:10.1056/NEJMoa021778; Sasso FC et al Cardiovasc Diabetol. 2021;20(1):145. Published 2021 Jul 16. doi:10.1186/s12933-021-01343-1

Response: Thank you, for suggesting these references. The suggested references were added to the text. ” (page, line: 66-69)

Methods and Materials:

- Line 128-129. Font typing error.

Response: Thank you, the mentioned items were corrected. ” (page, line: 134-135)

Discussion:

- Line 251. “china” is a typing error.

Response: Thank you, the mentioned items were corrected. ” (page, line: 238)

- Line 237-239. “Among middle-aged participants, the intermediate and ideal categories of BMI and BP, and the ideal category of FPG and in elderly individuals, only intermediate and ideal BP was associated with reduced risk of CKD”. The authors should better clarify the pathophysiological mechanisms/hypotheses supporting this sentence.

Response: Thank you, all information related to age over 65 years was removed from the draft article according to the opinions of reviewers.

- Line 262. “Actually, no association was demonstrated between ICVHM and incident CKD among elder population”. It therefore seems that ICVHM does not affect the prognosis of elderly patients. However, some recent literature seems in contrast with this conclusion. The authors should better clarify the pathophysiological mechanisms/hypotheses supporting this sentence.

Response: agreed, according to comment number 4 of the first reviewer and the last comment of the second reviewer, we decided to remove participant over 65 years old from the draft of the article.

________________________________________

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

Attachments
Attachment
Submitted filename: Response to reviewers.docx
Decision Letter - Ferdinando Carlo Sasso, Editor

PONE-D-22-17476R1Association of ideal cardiovascular health metrics with incident low estimated glomerular filtration rate: more than a decade follow-up in the Tehran Lipid and Glucose Study (TLGS)​PLOS ONE

Dear Dr. tohidi,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

==============================

ACADEMIC EDITOR:In particular, the authors have to address the issues raised by the third reviewer.

Please submit your revised manuscript by 2 weeks. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Ferdinando Carlo Sasso, PhD, MD

Academic Editor

PLOS ONE

Additional Editor Comments (if provided):

Please, address the issues raised by reviewer 2 and 3.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: (No Response)

Reviewer #3: (No Response)

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: No

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: No

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: No

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: No

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: All the criticisms raised were solved by the Authors. I do not have any further comment on the manuscript.

Reviewer #2: Dear Editor,

I’ve re revised the paper “Association of ideal cardiovascular health metrics with incident low estimated

glomerular filtration rate: more than a decade follow-up in the Tehran Lipid and

Glucose Study (TLGS)”, by Fatemeh Alizadeh et al.

However, some important issues need to be raised.

- Some drugs seem to have a beneficial effect on patients with chronic kidney disease. Please, briefly discuss this point by adding the reference (Irbesartan reduces the albumin excretion rate in microalbuminuric type 2 diabetic patients independently of hypertension: A randomized double-blind placebo-controlled crossover study. DOI 10.2337/diacare.25.11.19)

- The role of drugs as potential cofounders was not discussed. Please, briefly discuss this important issue.

Reviewer #3: PONE-D-22-17476R1: statistical review

SUMMARY. This is a cohort study to evaluate the association between ideal cardiovascular health metrics (ICVHM) and time up an event of low estimated glomerular filtration rate (eGFR). The core statistical analysis relies on a battery of Cox regression models where the effect of ICVHM is adjusted by including available confounding factors. I have several concerns about the estimation method (major issue 1), sample selection (major issue 2), model specification (major issue 3). I also append some specific points that should be addressed.

MAJOR ISSUES.

1. Lines 178-180. Although data are interval censored, event times are estimated by mid-points and treated as they were exact times. This approach is a potential source of bias and it is not correct. The authors should repeat the statistical analysis by accounting for the additional uncertainty brought by interval censoring. Cox regression analysis for interval-censored data can be easily perfromed in Stata, which is the software exploited by the authors: see the command "stintcox".

2. Lines 91-97. The statistical analysis is made on a subset of the initial sample. To avoid issues of selection bias, the authors should explain why the final sample can be considered as a random subset of the initial sample. See also specific point 1 below.

3. If I have understood well, covariates are included at baseline. However, some of this covariates (e.g. age) are time-varying and certainly have a time-varying confounding effects on the time up to the event. I'd welcome an analysis that adjusts for time-varying covariates. Alternately, the authors should explain why time-varying covariates are not appropriate here.

SPECIFIC POINTS

1. In lines 77-81, the authors talk about a large population-based study conducted in the Middle East and North Africa (MENA) during more than 15 years of follow-up. In lines 84-89, they instead talk about a 3-year study in Teheran, which seems the study considered in this paper. What is the link between the two studies? Why was the large population 15-year study evoked, if the actual study of interest is the 3-year study? Please clarify.

2. Lines 182-184. I'm glad that the authors have made some diagnostics of the model. However, the results are declared but not displayed. These secondary results should be commented and displayed as supplementary material.

3. Data. It is good that all the data are available without restrictions in a repository. However, is this repository public? If it is not, then the authors should provide precise instructions for obtaining the data.

4. There is a tendency to interpret the results as they were the outcome of a logistic regression model where the dependent variable is a binary variable that records the occurrence of the event. However, the dependent variable in a Cox model is the time up to the event and covariates modulate the hazard function. The text should be modified accordingly.

5. There some typos across the text, please check.

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

Reviewer #3: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Revision 2

Reviewer #1: All the criticisms raised were solved by the Authors. I do not have any further comment on the manuscript.

Response: Thank you for the positive comment.

Reviewer #2:

Dear Editor,

I’ve re revised the paper “Association of ideal cardiovascular health metrics with incident low estimated

glomerular filtration rate: more than a decade follow-up in the Tehran Lipid and

Glucose Study (TLGS)”, by Fatemeh Alizadeh et al.

However, some important issues need to be raised.

- Some drugs seem to have a beneficial effect on patients with chronic kidney disease. Please, briefly discuss this point by adding the reference (Irbesartan reduces the albumin excretion rate in microalbuminuric type 2 diabetic patients independently of hypertension: A randomized double-blind placebo-controlled crossover study. DOI 10.2337/diacare.25.11.19)

Response: Agreed, we used this important study in the discussion section. (Line: 331-335)

- The role of drugs as potential cofounders was not discussed. Please, briefly discuss this important issue.

Response: Agreed, we discussed this important issue in the limitation part of the manuscript. (Line: 331-335)

Reviewer #3: PONE-D-22-17476R1: statistical review

SUMMARY. This is a cohort study to evaluate the association between ideal cardiovascular health metrics (ICVHM) and time up an event of low estimated glomerular filtration rate (eGFR). The core statistical analysis relies on a battery of Cox regression models where the effect of ICVHM is adjusted by including available confounding factors. I have several concerns about the estimation method (major issue 1), sample selection (major issue 2), model specification (major issue 3). I also append some specific points that should be addressed.

MAJOR ISSUES.

1. Lines 178-180. Although data are interval censored, event times are estimated by mid-points and treated as they were exact times. This approach is a potential source of bias and it is not correct. The authors should repeat the statistical analysis by accounting for the additional uncertainty brought by interval censoring. Cox regression analysis for interval-censored data can be easily performed in Stata, which is the software exploited by the authors: see the command "stintcox".

Response: The theory for the analysis of interval-censored data has been developed over the past four decades. The midpoint of the censoring interval is a common practice in analyzing interval-censored survival data in medical and reliability studies to simplify the interval censoring structure and then apply standard analytic techniques for multivariate survival data [1-4]. The availability of software for right censoring might well be the main reason for this simplifying practice [5]. Although the performance of the mid-time approach may lead to biased estimates because of limited information due to interval-censoring (the event might happen at the beginning or end of the follow-up duration) Cox analysis has minimal impact from the differing assumptions about the timing of events [6]. Furthermore, our research team just published several papers using a similar approach in high-impact journals, including the Plos One journal [7-9].

Despite this, as requested by the reviewer, to test the robustness of our findings, we performed Cox regression analysis with interval-censoring using the "stintcox" command in STATA as a sensitivity analysis. Accordingly, the results using the interval-censored approach did not differ from those that obtained from the mid-point approach. (Lines 204-206 and 252-254)

2. Lines 91-97. The statistical analysis is made on a subset of the initial sample. To avoid issues of selection bias, the authors should explain why the final sample can be considered as a random subset of the initial sample. See also specific point 1 below.

Response: Agreed, we more clarified the method section of the revised manuscript. Moreover, to address the selection bias [10], propensity score (PS), the estimated probability that a participant would have followed in the study, was computed using maximum likelihood logistic regression analysis among the study population. The multivariable analysis, including PS as another covariate, was performed as another sensitivity analysis; accordingly, the findings were essentially unchanged. So the issue of selection bias might not affect our data analysis. (Lines: 196-199 and 249-252)

3. If I have understood well, covariates are included at baseline. However, some of this covariates (e.g. age) are time-varying and certainly have a time-varying confounding effects on the time up to the event. I'd welcome an analysis that adjusts for time-varying covariates. Alternately, the authors should explain why time-varying covariates are not appropriate here.

Response: Agreed, to test the robustness of our findings, we treated covariates, including age and marital status, as time-varying confounders in the sensitivity analysis; our results remained essentially unchanged, as shown in the supplementary material. (Lines: 205-207 and 254-256)

SPECIFIC POINTS

1. In lines 77-81, the authors talk about a large population-based study conducted in the Middle East and North Africa (MENA) during more than 15 years of follow-up. In lines 84-89, they instead talk about a 3-year study in Teheran, which seems the study considered in this paper. What is the link between the two studies? Why was the large population 15-year study evoked, if the actual study of interest is the 3-year study? Please clarify.

Response: The TLGS study is a prospective cohort study started in 1999 and is planned to be continued for about 20 years for the non-communicable outcomes. The participant are follow up every 3 years (phase 1: 1999-2002, phase 2: 2002-2005, phase 3: 2005-2008, phase 4: 2008-2011, phase 5: 2011-2014, phase 6: 2014-2018, phase 7: 2018-2021) Detailed information regarding the TLGS is available elsewhere (trial registration number: ISRCTN52588395). The current study includes those who participated in phase 3 of TLGS (2005-2008) and followed till February 2021; the median follow-up time for the current study was 15 years. More description was added to the method section to clarify this issue [11, 12]. (Line: 96-97)

2. Lines 182-184. I'm glad that the authors have made some diagnostics of the model. However, the results are declared but not displayed. These secondary results should be commented and displayed as supplementary material.

Response: All P values for proportionality assumptions were > 0.1 in different multivariable-adjusted models. (Line: 193-194) and (Supplementary Tables S1 and S2)

3. Data. It is good that all the data are available without restrictions in a repository. However, is this repository public? If it is not, then the authors should provide precise instructions for obtaining the data.

Response: The TLGS data is not public, however, Azizi F. is the pioneer researcher of the TLGS, and other authors of this manuscript are among the research team of TLGS in the research institute for endocrine sciences (RIES), so we have asses to the TLGS data.

4. There is a tendency to interpret the results as they were the outcome of a logistic regression model where the dependent variable is a binary variable that records the occurrence of the event. However, the dependent variable in a Cox model is the time up to the event and covariates modulate the hazard function. The text should be modified accordingly.

Response: Agreed, we modified the discussion section accordingly. (Line: 259-267)

5. There some typos across the text, please check.

Response: Done.

________________________________________

1. Kim MY, Xue X. The analysis of multivariate interval‐censored survival data. Statistics in Medicine. 2002;21(23):3715-26.

2. Rücker G, Messerer D. Remission duration: an example of interval‐censored observations. Statistics in Medicine. 1988;7(11):1139-45.

3. Lin DY, Wei L-J. The robust inference for the Cox proportional hazards model. Journal of the American statistical Association. 1989;84(408):1074-8.

4. Odell PM, Anderson KM, D'Agostino RB. Maximum likelihood estimation for interval-censored data using a Weibull-based accelerated failure time model. Biometrics. 1992:951-9.

5. Gómez G, Calle ML, Oller R, Langohr K. Tutorial on methods for interval-censored data and their implementation in R. Statistical Modelling. 2009;9(4):259-97.

6. Singh RS, Totawattage DP. The statistical analysis of interval-censored failure time data with applications. 2013.

7. Derakhshan A, Sardarinia M, Khalili D, Momenan AA, Azizi F, Hadaegh F. Sex specific incidence rates of type 2 diabetes and its risk factors over 9 years of follow-up: Tehran Lipid and Glucose Study. PloS one. 2014;9(7):e102563.

8. Ramezankhani A, Azizi F, Hadaegh F. Associations of marital status with diabetes, hypertension, cardiovascular disease and all-cause mortality: A long term follow-up study. PloS one. 2019;14(4):e0215593.

9. Derakhshan A, Bagherzadeh‐Khiabani F, Arshi B, Ramezankhani A, Azizi F, Hadaegh F. Different combinations of glucose tolerance and blood pressure status and incident diabetes, hypertension, and chronic kidney disease. Journal of the American Heart Association. 2016;5(8):e003917.

10. Rubin DB. Estimating causal effects from large data sets using propensity scores. Annals of internal medicine. 1997;127(8_Part_2):757-63.

11. Azizi F, Rahmani M, Emami H, Mirmiran P, Hajipour R, Madjid M, et al. Cardiovascular risk factors in an Iranian urban population: Tehran lipid and glucose study (phase 1). Sozial-und präventivmedizin. 2002;47(6):408-26. doi: 10.1007/s000380200008.

12. Azizi F, Ghanbarian A, Momenan AA, Hadaegh F, Mirmiran P, Hedayati M, et al. Prevention of non-communicable disease in a population in nutrition transition: Tehran Lipid and Glucose Study phase II. Trials. 2009;10(1):1-15. doi: 10.1186/1745-6215-10-5.

Attachments
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Submitted filename: Response to reviewers.docx
Decision Letter - Ferdinando Carlo Sasso, Editor

Association of ideal cardiovascular health metrics with incident low estimated glomerular filtration rate: more than a decade follow-up in the Tehran Lipid and Glucose Study (TLGS)​

PONE-D-22-17476R2

Dear Dr. tohidi,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

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Ferdinando Carlo Sasso, PhD, MD

Academic Editor

PLOS ONE

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Formally Accepted
Acceptance Letter - Ferdinando Carlo Sasso, Editor

PONE-D-22-17476R2

Association of ideal cardiovascular health metrics with incident low estimated glomerular filtration rate: more than a decade follow-up in the Tehran Lipid and Glucose Study (TLGS)​

Dear Dr. tohidi:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

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on behalf of

Professor Ferdinando Carlo Sasso

Academic Editor

PLOS ONE

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