Peer Review History
| Original SubmissionOctober 24, 2022 |
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PONE-D-22-29333A high latitude Gondwanan species of the Late Devonian tristichopterid Hyneria (Osteichthyes: Sarcopterygii)PLOS ONE Dear Dr. Ahlberg, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ============================== Dear Dr. Ahlberg, your manuscript has been evaluated by two referees. While one suggested acceptance as the manuscript is, the other had two minor comments. I would like to ask you to integrate these comments. Besides, I would like you to consider the Recommendation 11A of the International Code of Zoological Nomenclature which states that "An unmodified vernacular word should not be used as a scientific name. Appropriate latinization is the preferred means of formation of names from vernacular words." therefore the specific part of the new name should be latinized. Otherwise, in the explanation ot the name etymology please state that this is an apposition. Yours sincerely, Mikołaj Zapalski ============================== Please submit your revised manuscript by Jan 22 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please include a complete copy of PLOS’ questionnaire on inclusivity in global research in your revised manuscript. Our policy for research in this area aims to improve transparency in the reporting of research performed outside of researchers’ own country or community. The policy applies to researchers who have travelled to a different country to conduct research, research with Indigenous populations or their lands, and research on cultural artefacts. The questionnaire can also be requested at the journal’s discretion for any other submissions, even if these conditions are not met. Please find more information on the policy and a link to download a blank copy of the questionnaire here: https://journals.plos.org/plosone/s/best-practices-in-research-reporting. Please upload a completed version of your questionnaire as Supporting Information when you resubmit your manuscript. 3. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match. When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section. 4. Thank you for stating the following in the Acknowledgments Section of your manuscript: "RG acknowledges valuable discussions with M. I. Coates (University of Chicago) regarding much of the material described herein. The South African National Road Agency Limited (SANRAL) is thanked for their assistance in 1999 and 2005 with the rescue of palaeontological material from Waterloo Farm during roadworks. Ryan Nel is thanked for lab assistance and assistance with photography. Shawn Johnstone is thanked for assistance with mounting of the type specimen. RG is funded by the Millennium Trust, GENUS (DSI-NRF Centre of Excellence in Palaeosciences) and the NRF of South Africa. PEA acknowledges the support of a Wallenberg Scholarship from the Knut & Alice Wallenberg Foundation and an Advanced Grant (ERC-2020-ADG 10101963 "Tetrapod Origin") from the European Research Council." We note that you have provided funding information that is not currently declared in your Funding Statement. However, funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows: "PEA: Wallenberg Scholarship (not numbered), from the Knut & Alice Wallenberg Foundation. https://kaw.wallenberg.org PEA: ERC Advanced Grant ERC-2020-ADG 10101963 "Tetrapod Origin", from the European Research Council. https://erc.europa.eu/homepage RWG: Millennium Trust, South Africa (no number). https://www.mtrust.co.za RWG: GENUS (DSI-NRF Centre of Excellence in Palaeosciences), South Africa (no number). https://www.genus.africa RWG: NRF of South Africa (no number). https://www.nrf.ac.za The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." Please include your amended statements within your cover letter; we will change the online submission form on your behalf.54. Please include your full ethics statement in the ‘Methods’ section of your manuscript file. 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All PLOS content is published under the Creative Commons Attribution License (CC BY 4.0), which means that the manuscript, images, and Supporting Information files will be freely available online, and any third party is permitted to access, download, copy, distribute, and use these materials in any way, even commercially, with proper attribution. For more information, see our copyright guidelines: http://journals.plos.org/plosone/s/licenses-and-copyright. We require you to either (1) present written permission from the copyright holder to publish these figures specifically under the CC BY 4.0 license, or (2) remove the figures from your submission: a) You may seek permission from the original copyright holder of Figure 13 to publish the content specifically under the CC BY 4.0 license. We recommend that you contact the original copyright holder with the Content Permission Form (http://journals.plos.org/plosone/s/file?id=7c09/content-permission-form.pdf) and the following text: “I request permission for the open-access journal PLOS ONE to publish XXX under the Creative Commons Attribution License (CCAL) CC BY 4.0 (http://creativecommons.org/licenses/by/4.0/). Please be aware that this license allows unrestricted use and distribution, even commercially, by third parties. Please reply and provide explicit written permission to publish XXX under a CC BY license and complete the attached form.” Please upload the completed Content Permission Form or other proof of granted permissions as an "Other" file with your submission. In the figure caption of the copyrighted figure, please include the following text: “Reprinted from [ref] under a CC BY license, with permission from [name of publisher], original copyright [original copyright year].” b) If you are unable to obtain permission from the original copyright holder to publish these figures under the CC BY 4.0 license or if the copyright holder’s requirements are incompatible with the CC BY 4.0 license, please either i) remove the figure or ii) supply a replacement figure that complies with the CC BY 4.0 license. Please check copyright information on all replacement figures and update the figure caption with source information. If applicable, please specify in the figure caption text when a figure is similar but not identical to the original image and is therefore for illustrative purposes only. 7. Please review your reference list to ensure that it is complete and correct. 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In the Results section, the globally unique identifier (GUID), currently in the form of a Life Science Identifier (LSID), should be listed under the new species name, for example: Anochetus boltoni Fisher sp. nov. urn:lsid:zoobank.org:act:B6C072CF-1CA6-40C7-8396-534E91EF7FBBAnother LSID for the manuscript itself should also appear within the Nomenclature statement. You will need to contact Zoobank (zoobank.org/About) to obtain a GUID (LSID). You should receive one LSID for your manuscript and a separate, unique LSID for the new species. 2) Please also insert the following text into the Methods section, in a sub-section to be called "Nomenclatural Acts": The electronic edition of this article conforms to the requirements of the amended International Code of Zoological Nomenclature, and hence the new names contained herein are available under that Code from the electronic edition of this article. This published work and the nomenclatural acts it contains have been registered in ZooBank, the online registration system for the ICZN. The ZooBank LSIDs (Life Science Identifiers) can be resolved and the associated information viewed through any standard web browser by appending the LSID to the prefix "" ext-link-type="uri" xlink:type="simple">http://zoobank.org/". The LSID for this publication is: urn:lsid:zoobank.org:pub: XXXXXXX. The electronic edition of this work was published in a journal with an ISSN, and has been archived and is available from the following digital repositories: PubMed Central, LOCKSS [author to insert any additional repositories]. All PLOS ONE articles are deposited in PubMed Central and LOCKSS. If your institute, or those of your co-authors, has its own repository, we recommend that you also deposit the published online article there and include the name in your article.Following a recent ruling by the International Commission on Zoological Nomenclature, electronic journals are now a valid format for publication of new zoological taxa. In order to ensure the valid publication of your new species, please be sure to include the updated version of Nomenclatural Acts (above). A complete explanation of our guidelines for publishing new species can be found on our website: http://www.plosone.org/static/guidelines#zoological. Additional Editor Comments: Dear Dr. Ahlberg, your manuscript has been evaluated by two referees. While one suggested acceptance as the manuscript is, the other had two minor comments. I would like to ask you to integrate these comments. Besides, I would like you to consider the Recommendation 11A of the International Code of Zoological Nomenclature which states that "An unmodified vernacular word should not be used as a scientific name. Appropriate latinization is the preferred means of formation of names from vernacular words." therefore the specific part of the new name should be latinized. Otherwise, in the explanation ot the name etymology please state that this is an apposition. Yours sincerely, Mikołaj Zapalski [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: N/A Reviewer #2: N/A ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I have no major issues with this manuscript, just two clarification questions about the criteria used to establish the fossil examined as a new species. 1. On lines 167-168, the authors state that the specimen looks very similar to an existing type species, with only "proportional differences in some bones" differentiating them. Would it be possible to illustrate that these proportional differences are NOT simply a difference in size? In other words, show that the proportional differences are not always in the same direction between the species. 2. The authors also note that the teeth in this new fossil are "much less well preserved than the bone" and that even the largest "do not show complete natural outlines". Given this, I question using the size of the dentary fangs as a diagnostic character for the species. Could the authors provide more support for this particular diagnostic character? Reviewer #2: This is a well written paper based on a reasonably good material of a giant tristichopterid Hyneria (Sarcopterygii) from the late Famennian of Waterloo Farm in South Africa. The major strength of this work is the detailed description of a new specimen which is similar to the type species, H. lindae, but with more completely preserved anterior part. Particularly, the presence of skull bones adds much new information to our previous knowledge on this genus. The material, isolated bones, are well illustrated and interpreted. As I am not an expert on sarcopterygians I cannot judge if the proposition of giving a new species name (H. udlezinye) to the specimen under description, despite its general similarity to H. lindae, is justified. However, as the new specimen comes from Gondwana, and the older material from Laurussia (Pennsylvania), such a solution seems acceptable. H. udlezinye is not the first giant tristichopterid found from Gondwana, but the first one which comes from high palaeolatitudes. Generally, although I do not think this paper brings ground-breaking new information, I consider it useful and important, and I am sure it deserves publication. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: Yes: Michał Ginter ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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A high latitude Gondwanan species of the Late Devonian tristichopterid Hyneria (Osteichthyes: Sarcopterygii) PONE-D-22-29333R1 Dear Dr. Ahlberg, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Mikołaj K. Zapalski, Ph. D., D. Sc. Academic Editor PLOS ONE Additional Editor Comments (optional): Dear Prof. Ahlberg, Thank you for introducing changes in the text, and, where relevant, explaining convincingly why the changes are not desired. The manuscript can be accepted in its present form. My best wishes in 2023! Mikołaj Zapalski Reviewers' comments: |
| Formally Accepted |
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PONE-D-22-29333R1 A high latitude Gondwanan species of the Late Devonian tristichopterid Hyneria (Osteichthyes: Sarcopterygii) Dear Dr. Ahlberg: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Mikołaj K. Zapalski Academic Editor PLOS ONE |
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