Peer Review History
| Original SubmissionMay 4, 2022 |
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PONE-D-22-12037Do cancer detection rates differ between transperineal and transrectal micro-ultrasound mpMRI-fusion-targeted prostate biopsies? A propensity score-matched studyPLOS ONE Dear Dr. Rakauskas, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please revise. Please submit your revised manuscript by Nov 06 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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We will update your Data Availability statement to reflect the information you provide in your cover letter. 3. We note that you have indicated that data from this study are available upon request. PLOS only allows data to be available upon request if there are legal or ethical restrictions on sharing data publicly. For more information on unacceptable data access restrictions, please see http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. In your revised cover letter, please address the following prompts: a) If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. b) If there are no restrictions, please upload the minimal anonymized data set necessary to replicate your study findings as either Supporting Information files or to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. We will update your Data Availability statement on your behalf to reflect the information you provide. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors retrospectively compared the overall prostate cancer (PCa) and clinically significant prostate cancer (csPCa) detection rate between transperineal (TP) and transrectal (TR) micro-ultrasound mpMRI-fusion-targeted prostate biopsies in a series of only 135 patients. The secondary outcomes were to compare the detection rates of random and targeted biopsies stratified per access route and to evaluate micro-US for its potential added value. They found that the PCa and csPCA detection rates between TR and TP were similar. Detection rates also did not differ between random and targeted biopsies stratified per access route TR vs. TP. Additionally; they reported that targeted micro-ultrasound biopsies upgraded 2% of patients to csPCa The micro-ultrasound is a promisor new technique that may improve PCa diagnosis and therefore new data is welcome. The novelty of this study relies in the comparison of TP vs. TR route employing MRI and micro-ultrasound. The sample size is small and this is the main problem of this study - 47 vs. 88 cases make hard to anyone to conclude that both biopsy routes are similar. The authors recognize this issue and justify by saying that this paper represents their initial results. Based on that I recommend rejection until a larger sample is achievable by this group. The paper has also some methodology problems that require major revision if the editor consider acceptance of it. Major revisions 1) If the main purpose is to compare the detection rate of TR versus TP biopsy; the exclusion of anterior zone tumors definitively compromise the results and probably is the main cause of no detection rate difference between the two groups. If I agree with the removal of anterior tumors at MRI because it would favor the TP group (author´s justification), I also should remove posterior tumors in accordance because it would favor the TR route. 2) The small sample size is the major limitation of this study. They reported on only 135 patients of which ~42-45% of cases were positive for csPCa. This small number of cases probably jeopardize the study’s results and the conclusions. For example, the csPCa detection rate between random and MRI guided were similar in this trial, which is against the whole body of the MRI guide prostate biopsy literature that shows that MRI guided fragments have a higher chance of csPCa when compared to random fragments. The small number of cases may explain this contradictory finding 3) The author say that this is their preliminary result but the last case was included two years ago. Once the sample is of only 135 cases, why the authors did not include the most recent performed cases? 4) The add value of micro-ultrasound was of only 2% but even so the authors came to the conclusion that it has an additional diagnostic value over systematic and MRI-targeted biopsies. I don´t think this 2% is clinically significant. For example, it is acknowledge that a biopsy can be avoided in patients with PIRADS-2, previous negative biopsy and a PSA density below 0.15 because in this situation we would miss only 4 to 5% of csPCa. If missing 5% of csPCa is acceptable I don´t think that an increase of only 2% by adding micro-ultrasound has any clinical benefits. According to the results, I would have to employ micro-ultrasound in 50 cases to diagnose an additional csPCa case. Once these are the initial results perhaps, the added micro-ultrasound value may be higher with the inclusion of more cases. 5) At methodology line 103, the author say that all MRI was reviewed which is important. However, it is not clear how this was done? How many radiologists participated at this “uroradiology meeting”? The uroradiologists had experience reading multiparametric MRI? If there is disagreement regarding the assigned PIRADS how this was solved? 6) Despite the propensity score-matched process the groups are still unbalanced. The transperineal group has a higher number of sampled fragments. The author think that this may have an impact at detection rate between the two groups? 7) At discussion and conclusion the author highlighted the potential benefits and accuracy of micro-ultrasound that are not based in their results. They argue that TR and TB detection rates were similar because the benefits of micro-ultrasound. However, both groups underwent biopsy with micro-ultrasound therefore what is been compared is not the advantage of micro-ultrasound but the difference of TR versus TP route. A third transrectal and a fourth transperineal arms without micro-ultrasound would be necessary to attest that the lack of difference between groups 1 and 2 were due the advantage of micro-ultrasound or its higher accuracy. 8) The micro-ultrasound detected 36 MRI invisible lesions in 33 patients but only 19% of them were CsPCa at biopsy result and the final additional benefit in increasing csPCa detection was of only 2%. Where is the micro-ultrasound advantage? 67% of suspicious lesions at micro-ultrasound had no cancer at all...... Minor revision 1) Why the table 1 that compare the patient´s characteristics between the two groups do not contain the p-values? The p-values must be included at tables and not only at the text. 2) I think table 3 is unnecessary 3) This study is a hypothesis generating study and this should be highlighted at study limitations at discussion section (lines 260 -267). 4) Line 119 change “TR-P” to “TP-B” 5) MRI was “positive” in 60% of cases (line 168) How many cases were micro-ultrasound positive I mean PRIMUS 3 to 5? 6) Why to mention the Future trial that did not compared TP versus TR biopsies ? Instead they compared Fusion vs. Cognitive vs. in Bore biopsy? The Future did not evaluate micro-ultrasound either. Furthermore it is well known that Future trial is an underpowered study because at sample size calculation of the trial they needed around 400 PIRADS 3-5 lesions but they had only 234 cases with suspicious MRI. Reviewer #2: It is an interesting and present issue. The microultrasound have been shown promissed results and probably will have a role in prostate cancer diagnostic scenario. The authors report results from a retrospective matched groups comparison which showed no difference between detections rates between transperineal and transrectal prostate biopsies using micro-ultrassound. Despite the retrospective design study decreases its conclusions streght these results deserve to be published. The choice for a prostate biopsy route should take the detection rate in consideration. This study reinforce a tendency showed in previous publications which compared perineal and transrectal route using ordinary ultrasound devices. In my opinion, some aspects could be clarified to improve this report: 1. Do the authors believe that the report of anterior-only positive biopsies on perineal route could be interesting for comparison between perineal and transrectal detection rates? 2. Regarding the low PPV value of PIRADS 3 MRI targeted biopsies, do the authors believe that a secondary analysis including only PIRADS 3 splited from PIRADS 4-5 could improve the results? How many PIRADS 3 lesions presented different characteristics on micro-US views, for example? Thinking in this issue, In Table 1 - Patients Characteristics, could the rate of PIRADS 3 be individualized? 3. Were the micro-US target biopsies performed by a blinded operator? Specifically, had the radiologists previous access to the MRI images, before biopsy? Do the authors believe that this fact could interfer in positive rates of micro-US target biopsies when compared to MRI fusion biopsies? 4. Do the rates of micro-US targeted biopsies differ from random biopsies? In my opinion, it is not clear in the report. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. 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| Revision 1 |
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Do cancer detection rates differ between transperineal and transrectal micro-ultrasound mpMRI-fusion-targeted prostate biopsies? A propensity score-matched study PONE-D-22-12037R1 Dear Dr. Rakauskas, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Robert Jeenchen Chen, MD, MPH Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #3: All comments have been addressed Reviewer #4: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #3: Yes Reviewer #4: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #3: Yes Reviewer #4: N/A ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #3: Yes Reviewer #4: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #3: Yes Reviewer #4: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #3: This is a well written manuscript of a retrospective study of prostate gland biopsy. It tried to highlight the benefits of prostate micro-US and if this should be regarded as a replacement or an add-on test to systematic and mpMRI-targeted biopsy. The manuscript had satisfied the journal requirements. However, the standardized protocol in the study environment where a single expert radiologists interprets 3T prostate mpMRI and PI-RADS can be modified to allow for between 2 to 3 expert radiologists to interpret these results. This will reduce/eliminate single observer bias. Reviewer #4: I reviewed the manuscript, editors' comments and the responses. To me this is an honest report of their observation and will add to the current knowledge. If I was supposed to write this, I would have the overall detection part first and then compare the results of different approaches to the biopsy. However, the relevant reader of this paper will find their way to interpret the findings. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #3: No Reviewer #4: No ********** |
| Formally Accepted |
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PONE-D-22-12037R1 Do cancer detection rates differ between transperineal and transrectal micro-ultrasound mpMRI-fusion-targeted prostate biopsies? A propensity score-matched study Dear Dr. Rakauskas: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Robert Jeenchen Chen Academic Editor PLOS ONE |
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