Peer Review History
| Original SubmissionAugust 29, 2022 |
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PONE-D-22-24164Incidence of major depressive disorder over time in patients with liver cirrhosis: A nationwide population-based study in KoreaPLOS ONE Dear Dr. Yoo, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Nov 25 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Kind regards, Sanjiv Mahadeva, MRCP, MD Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Thank you for stating the following financial disclosure: "This study was supported by the Soonchunhyang University Research Fund." Please state what role the funders took in the study. If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." If this statement is not correct you must amend it as needed. Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf. 3. 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PLOS only allows data to be available upon request if there are legal or ethical restrictions on sharing data publicly. For more information on unacceptable data access restrictions, please see http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. In your revised cover letter, please address the following prompts: a) If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. b) If there are no restrictions, please upload the minimal anonymized data set necessary to replicate your study findings as either Supporting Information files or to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. We will update your Data Availability statement on your behalf to reflect the information you provide. Additional Editor Comments: The study topic is of interest. However, there are several concerns regarding the study design & methodology. Please refer to the reviewers' comments & address them accordingly. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: No ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: This is a study in an area in cirrhosis which has not attracted much attention. Therefore, this manuscript is welcomed. This study is on the incidence of depression based on the timeline relative to the diagosis of cirrhosis, ie. before and after based on reimbursement claims. I have a few comments regarding the manuscript. MAJOR comments 1. The Abstract lacked details of the data generated from this study (eg. incidence rate of major depression before and/or after diagnosis of cirrhosis). It will be more useful and informative to the reader to include these and other relevant statistics in the Abstract. 2. The Materials and Methods lack a detailed description of the statistical analysis performed for this study. Please highlight the statistical methods on incidence rate and relative risk (or should it be incidence rate ratio?). 3. I am not familiar with the Korean HIRA but if the data is extracted based on claims for reiumbursements, then the number of claims (ie. the numerator) will include patients with existing depression and those with newly diagnosed depression, ie. the prevalence of depression. If the data in this study is based on incidence, then the numerator should include only newly diagnosed depression at each stipulated time frame. It would be useful for the authors to clarify this matter and state this clearly under Materials and Methods. 4. The authors substratified the dataset into smaller groups based on age and gender. I am not versed in the scientific literature of depression but is the incidence (or prevalence) of depression dependent on age and gender ? Please clarify this and provide appropriate references in under Materials and Methods. 5. The authors divided the study period into pre- and post-diagnosis of cirrhosis. Similar to Q4 above on age and gender, what is the relevance of these time intervals (based on number of days before and after) on the diagnosis of depression and provide references if appropriate. 6. A large proportion of the statistical analysis of this study is a comparison of incidence rate of depression after diagnosis of cirrhosis to the incidence rate of depression between 1 to 2 years before diagnosis of cirrhosis. How did the authors compute the relative risk and arrivate at the correspondings statistical p value ? In my opinion, it would be more appropriate to compare incidence rate of different groups by the incidence rate ratio, ie. the IRR. The statistical method for comparison would either be Poisson or negative binomial regression depending on characteristics of the dataset. MINOR comments 1. In paragraph 2, lines 1-5 of Materials and Methods, the authors described the exclusion criteria for the study. I am interested to know why each exclusion criteria is necessary and provide the apropriate references. 2. In paragraph 2, line 2 of Results, the mean age was expressed as "58.5+13.5 years". This is likely a typographical error and the standard deviation of the mean should be expressed as "58.5±13.5 years". 3. In paragraph 1 of Discussion, the authors described the increasing trend of incidence of depression after the diagnosis of cirrhosis which gradually decreases over time. It is also worthy to comment that in the 1 year preceeding the diagnosis of cirrhosis, the incidence of depression was already increasing compared to 1 to 2 years prior to diagnosis regardless of age and gender, which the authors failed to note. I am curious why this might be the case. Is this interesting observation also seen in other chronic diseases ? 4. In paragraph 2, lines 5 & 6 of Discussion, the authors concluded that "....because of high basal incidence, the relative risks were lower in female and elderly patients......". To substantiate this, suggest to compare the incidence rate of depression at baseline across groups, ie. 3.11 vs 4.53 per 100 patients-years for comparison of male vs female and 2.89 vs 4.16 per 100 patient years for comparison of young vs old and compute the appropriate p value for statistical signifiance of the comparison. 5. Under Discussion, there is little mention on other relevant scientific literature on depression and/or anxiety in cirrhosis or the possible reasons for aggravation of depression in this group of patients. The authors provide a single reference 6 but this is a narrative review and is not specific to cirrhosis. Hernaez R et al. Clin Gastroenterol Hepatol 2022 provided an insight to the risk factors for depression and anxiety in cirrhosis. 6. Similar to the comments on relative risk or more appropriately IRR, Table 1 should reflect the appropriate statistical method of comparison. There is also no mention of the p value in the comparison for the substratification by age and gender. 7. The x-axis of Figure 1A, 1B and 1C is ambiguous. It should be reflected clearly that the numbers on the x-axis refers to days. Please also ensure the right y-axis is labelled appropriately, ie. RR or IRR? Reviewer #2: 1. The purpose of the article was to examine the incidence of major depressive disorder (MDD) among patients with cirrhosis from the time before and after their diagnosis, using a retrospective analysis of the ICD-10. 2. There was a very interesting study, and I have the following concerns to address: kindly be informed that the author provided details regarding the materials and techniques, including the methodology, flow diaphragm of study enrollment using inclusion and exclusion criteria, as well as statistical analysis used in the article. 3. Population: Due to the article's focus on the incidence of major depressive disorder (MDD) in cirrhotic patients both before and after diagnosis, the precise moment of each disease's diagnosis had a significant impact on the study's findings. How does the author use the ICD-10's first-ever documentation of "cirrhosis" and "depression"? In the methodology, please be more specific. 4. What does "an incorrect mortality code" mean in the context of the materials and procedures on the 48th line? 5. Would the author kindly clarify on how they classified the time before and after the cirrhosis diagnosis using eight periods? 6. Following the result section on lines 78 to 82 of the paragraph as follows: “possibly due to the aggravation of underlying condition before cirrhosis (e.g. chronic hepatitis) that gradually deteriorated patients’ mental health.” Are there any supporting facts or just the author's opinions? Please reconsider the phase change or switch to the discussion part. 7. According to the author mention in the discussion part: "psychological trauma immediately after diagnosis might be the most influential factor." From the design of the retrospective study, there was overemphasis. Kindly ask the author to reconsider. 8. The author mentions the following in the discussion section: “because of the high basal incidence, the relative risks were lower in females and elderly patients than in males and younger patients.” According to another statement, "which even increased after the start of liver cirrhosis," it was difficult for the reader to understand and may have been misunderstood. 9. Additionally, the majority of illnesses that have an impact on mental health or depression are chronic illnesses such chronic liver disease or cancer, including hepatocellular carcinoma. Some cirrhotic patients, particularly those with a Child-Pugh score of A or treatable illnesses like hepatitis C infection, may not experience symptoms of their condition. This article lacked important information. 10. Last but not least, the disease's treatment for both cirrhosis and depression affects the incidence in each stage of the illness, such as medically controlling for depression, curing hepatitis C disease, and fibrosis regression in NASH. Once more, this articel was lacking crucial details. 11. Minor comment: Figure 1's right column contains an incorrect term for the “pre-diagnosis stage” of cirrhosis. Kindly ask the author to reconsider. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. 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| Revision 1 |
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PONE-D-22-24164R1Incidence of major depressive disorder over time in patients with liver cirrhosis: A nationwide population-based study in KoreaPLOS ONE Dear Dr. Yoo, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Dec 25 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Sanjiv Mahadeva, MRCP, MD Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. Additional Editor Comments: The revised submission is much improved. Please refer to Reviewer #1's comments & address them accordingly. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Thank you for addressing the issues raised in the previous manuscript, especially clarifying the main aim of the research. I have additional minor comments only: 1. Under Abstract and Results, the IRR was reported but no p value was given. Kindly include the p values for the relevant IRRs in the Abstract and Results. 2. Under Abstract, it will also be useful to the reader for authors to define the control period as 1 to 2 years before diagnosis of cirrhosis. 3. Lastly, this is pertaining to the Reviewer #1, Minor Comments 3 on rising incidence rate of depression 1 year before diagnosis compared to control period of 1 to 2 years before diagnosis of cirrhosis. Could the authors consider amending lines 1 to 2 of paragraph 4 under Discussion as "Another notable point in our study is that the incidence of MDD is increasing 1 year before compared to the control period of 1 to 2 years before the diagnosis of cirrhosis". Reviewer #2: Thank you for giving me the opportunity to again review this interesting paper. Even though the paper still had some limitations, the authors stated and provided these limitations in the discussion section. As well, the authors emphasized key points and responded all of my comments nicely. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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Incidence of major depressive disorder over time in patients with liver cirrhosis: A nationwide population-based study in Korea PONE-D-22-24164R2 Dear Dr. Yoo, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Sanjiv Mahadeva, MRCP, MD Academic Editor PLOS ONE Additional Editor Comments (optional): Very minor comments from the previous review - all have been addressed |
| Formally Accepted |
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PONE-D-22-24164R2 Incidence of major depressive disorder over time in patients with liver cirrhosis: A nationwide population-based study in Korea Dear Dr. Yoo: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Prof Sanjiv Mahadeva Academic Editor PLOS ONE |
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