Peer Review History

Original SubmissionMarch 7, 2022
Decision Letter - Jason T. Blackard, Editor

PONE-D-22-06352Seroprevalence and factors associated with hepatitis B virus infection in incarcerated population from southern BrazilPLOS ONE

Dear Dr. Ferreto,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Jul 20 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Jason T. Blackard, PhD

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

2. We note that you have stated that you will provide repository information for your data at acceptance. Should your manuscript be accepted for publication, we will hold it until you provide the relevant accession numbers or DOIs necessary to access your data. If you wish to make changes to your Data Availability statement, please describe these changes in your cover letter and we will update your Data Availability statement to reflect the information you provide.

Additional Editor Comments (if provided):

This is a cross-sectional study of HBV in incarcerated persons in southern Brazil.

Prison populations are poorly studied but likely contribute a significant burden of HBV; thus, studies such as this are relevant.  The overall prevalence was high at 11.9%, although other findings are expected, and the methods are quite standard for an epidemiologic study.

There are multiple awkward phrases.  The manuscript should be reviewed carefully by a native English speaker and/or a professional editing service.

Line 136:  AIDS should be listed as HIV.

Line 158:  does “having already had hepatitis” mean that they knew they had HBV already, had HBV previously and clearly it and now have HBV again, or had HCV previously/currently?  The meaning must be clarified here and elsewhere in the manuscript.

For Tables 1 and 2:  How was knowledge about HIV or hepatitis assesses?  No information is provided in the methods.

In Tables 1 and 2:  what does “ever had hepatitis” refer to?  HBV or HCV or both?

How was HBV vaccination status determined?

Limitations are not listed but include the lack of HBV DNA testing and lack of HBeAg testing.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: I Don't Know

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: No

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: - The authors should have a look at the statistical analysis package versions that they have included, they differ in the same paragraph Line 145 and Line 148.

- Furthermore, Table 1: The authors should indicate that they have reported percentages

Reviewer #2: The authors determined HBsAg, anti-HBs and total anti-HBc in incarcerated individuals in three settings with the intention of determining the seroprevalence and risk factors. The data presented however does not seem complete because only HBsAg seroprevalence is reported but there is no comment on anti-HBs and total anti-HBc. Also, numbers enrolled in the three sites needs a bit more detail as to how they were enrolled (What was the total number in each setting). The outcomes of the statistical analysis in the tales 1 is confusing as a p-value has been assigned to each column. Were the three columns being compared? Don't we need just one p-value? Hepatitis B infection seems to be defined as the presence of HBsAg so this should reflect in the entire manuscript and must be distinguished from the disease e.g. lines 199-120. The authors must make reference to the tables as they describe the results.

The authors must also shorten the discussion

Below are a few minor comments:

1. Line 81: sentence ends with "and"

2. Line 98: delete sentence beginning with "it is.........."

3. Line 108 following: just make reference to the study (delete the title quoted)

4. Line 133: what intervention are the authors referring to?

5. Line 138: was it serum or plasma or both?

6. Lines 140-143: the authors need to present the name of the assay, the company, the city and country in which it was manufactured

7. Line 141: which lab are the authors refering to? Either they delete or provide the name of the lab.

8. Line 148: Provide the company, the city and country in which it was manufactured

9. Line 262: Delete, "At this juncture"

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Revision 1

The editorial team required one action from our part, namely: to draft a short summary of the restrictions regarding data sharing (it can be about a paragraph long). We included this information in the last submission. Hence, it remains unclear to us if Plos One wants this information to be included in the article or if this information must appear in the Data Availability Statement. Anyhow, we perfected the previous summary explaining the reasons behind the restrictions for sharing this dataset. We also added this information under the “Data Availability Statement” section in the online submission system. The new summary now reads as:

Data cannot be shared publicly because of the National Health Council Resolution number 466 (http://conselho.saude.gov.br/resolucoes/2012/Reso466.pdf), - items “II.25”, “III 1 q”, and “IV.3 e”. The resolution states that researchers could solely use and share the material and data obtained in the research exclusively according to the consent of the participants and/or partner institutions. At the time of data collection, participants were not asked to consent that their data could be shared. As such, any further use and/or sharing of data must be approved beforehand by contacting the Western Paraná State University Institutional Ethics Committee (e-mail cep.prppg@unioeste.br; Telephone +5545 3220-3056).

Decision Letter - Jason T. Blackard, Editor

PONE-D-22-06352R1Seroprevalence and factors associated with hepatitis B virus infection in the incarcerated population from southern BrazilPLOS ONE

Dear Dr. Defante Ferreto,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please make the minor revisions suggested by both reviewers prior to acceptance of your manuscript.

Please submit your revised manuscript by Dec 03 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Jason T. Blackard, PhD

Academic Editor

PLOS ONE

Journal Requirements:

Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

Additional Editor Comments:

Please make the minor revisions suggested by both reviewers prior to acceptance of your manuscript.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The authors have satisfactorily addressed all the reviewer's comments and no further revisions. The editor should correct the typographical error on the abstract -Line 10 because it looks like a word is missing. Otherwise, the manuscript should be accepted for publication in PlosOne.

Reviewer #2: Few concerns:

1. The introduction is too long. Lines 90-115, 116-127 may be shortened and portions used while discussing the results. For examples, lines 260 to 266 seems to be a repetition of part of 104-115.

2. I think a better title will be "exposure" not "infection" with HBV. anyone with anti-HBs has recovered so cannot be infected. (see also line 182; antigens were also tested for)

3. Line 250 HBV includes virus (saying HBV virus is therefore a repetition)

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: Yes: Professor Kwamena William Sagoe

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Revision 2

We are pleased to send you the requested information regarding the “PONE-D-22-06352” in this new cover letter. In summary, we were asked to perform minor reviews that are detailed below. We would like to anticipate that all the suggestions were accepted.

1st request (Editor).

Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

Response to the 1st request.

Dear Dr. Jason, we revised all the references. There were no retracted papers cited in our study, only two references in which there were errors regarding authorship naming (i.e., Refence number 14 and Reference number 32) and one correction (errata) for Reference number 35.

As references 14 and 32 were already cited correctly, we kept these in the text. However, considering that reference number 35 contained substantial corrections, it is somewhat “old” and does not add significant evidence to our manuscript, we decided to exclude it.

We adjusted the citations in our text, and you can clearly see the changes in the file “Revised Manuscript with Track Changes”. Hyperlinks were all checked and minor corrections were performed in the reference list.

For your information, here are the reasons given by the authors for their corrections (ref. 14 and 32) and for the errata (ref. 35).

Reference 14:

February 27, 2019: Minor Correction: Fu Hsiung Su's affiliations of “5, 7, 8, 9” should have included affiliation 3 (Department of Family Medicine, Taipei Medical University Hospital, Taipei City, Taiwan). In the Funding and Grant Disclosures, “Taipei Medical Hospital” should have been “Taipei Medical University Hospital”.

Link: https://peerj.com/articles/4297/

Reference 32:

Correction added on 2 April 2019, after first online publication: This article has been updated to correct the name of the author from ‘John Kaldo’ to ‘John Kaldor’. The second line of the ‘Results’ section of the Abstract has also been corrected to read ‘Hepatitis B’ instead of ‘Hepatitis C’, as indicated by the symbol ᶺ.

Link: https://onlinelibrary.wiley.com/doi/full/10.1111/1753-6405.12870

Reference 35 (excluded in the revised manuscript):

In the MMWR Recommendations and Reports, "Prevention and Control of Infections with Hepatitis Viruses in Correctional Settings," published on January 24, 2003, an error occurred on page 4 in the second sentence of the paragraph under Occupational Exposures. The sentence should read, "Occupational transmission of HBV infection among hospital-based workers has been linked to percutaneous and mucous membrane exposures, and HCV infection has been primarily associated with percutaneous exposure." On page 12, in Box 6, the fourth item under Type of Exposure should read, "Household (e.g., cell or dormitory) contact --- to person with chronic HBV infection." On page 2, errors occurred in Table 1, and on page 20, errors occurred in Table 5.

Link: https://www.cdc.gov/mmwr/preview/mmwrhtml/mm5210a9.htm

2nd request (Reviewer #1).

The authors have satisfactorily addressed all the reviewer's comments and no further revisions. The editor should correct the typographical error on the abstract -Line 10 because it looks like a word is missing. Otherwise, the manuscript should be accepted for publication in PlosOne.

Response to the 2nd request. We thank the reviewer for this remark. Indeed, “HBV infection” was missing from the text. We corrected this issue.

3rd request (Reviewer #2).

1. The introduction is too long. Lines 90-115, 116-127 may be shortened and portions used while discussing the results. For examples, lines 260 to 266 seems to be a repetition of part of 104-115.

2. I think a better title will be "exposure" not "infection" with HBV. anyone with anti-HBs has recovered so cannot be infected. (see also line 182; antigens were also tested for)

3. Line 250 HBV includes virus (saying HBV virus is therefore a repetition).

Response to the 3rd request. All these comments are extremely helpful. In the revised file, the reviewer and the editor will note that we: 1) shortened the introduction while also using some portions in the discussion; 2) revised the title and, when appropriated, substituted the word “infection” for exposure in the main text; and 3) deleted “virus” after HBV, hence avoiding repetition. All these changes are clearly marked using the “track changes” option and correspond to the sections of the text mentioned by the reviewer 2.

Finally, we followed the final instructions and removed our previous manuscript files and uploaded only this new Cover Letter. If you need any further information, please, do let us know. Once again, many thanks for your assistance.

Yours faithfully,

The authors

Attachments
Attachment
Submitted filename: Rebbutal 4.docx
Decision Letter - Jason T. Blackard, Editor

Seroprevalence and factors associated with hepatitis B virus exposure in the incarcerated population from southern Brazil

PONE-D-22-06352R2

Dear Dr. Ferreto,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Jason T. Blackard, PhD

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

None

Reviewers' comments:

None

Formally Accepted
Acceptance Letter - Jason T. Blackard, Editor

PONE-D-22-06352R2

Seroprevalence and factors associated with hepatitis B virus exposure in the incarcerated population from southern Brazil

Dear Dr. Defante Ferreto:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Jason T. Blackard

Academic Editor

PLOS ONE

Open letter on the publication of peer review reports

PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.

We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.

Learn more at ASAPbio .