Peer Review History
| Original SubmissionAugust 19, 2022 |
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PONE-D-22-23310A Novel CCN pooling layer for breast cancer segmentation and classification from thermogramsPLOS ONE Dear Dr. A. Mohamed, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. The manuscript should be improved and revised according to the suggestions and comments of the reviewers, specifically focusing on the contextualisation of the study within the state-of-the-art body of knowledge, and improvement of the description and presentation of methodology and results. Please submit your revised manuscript by Oct 20 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: I Don't Know Reviewer #2: No ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Authors should address the following revision: 1) "The most important challenges in breast cancer detection process are accurate segmentation of the breast area and classification of the breast tissue, which play an important role in image guiding surgery, radiological treatment, and clinical computer-assisted diagnosis."- add this ref for the support of this statement: (Breast cancer detection and classification using traditional computer vision techniques: a comprehensive review) 2) Add the importance of deep learning in the domain of medical imaging such as lung cancer, skin cancer, etc. Add the theoratical knowledge with the help of the following references: - BrainNet: optimal deep learning feature fusion for brain tumor classification - COVID19 Classification using Chest X-Ray Images: A Framework of CNN-LSTM and Improved Max Value Moth Flame Optimization - COVID-19 Classification from Chest X-Ray Images: A Framework of Deep Explainable Artificial Intelligence 3) related work should be improved by adding the following works: - Predicting Breast Cancer Leveraging Supervised Machine Learning Techniques - Breast Cancer Classification from Ultrasound Images Using Probability-Based Optimal Deep Learning Feature Fusion 4) Add the major contributions under the introduction section. 5) In the methodology section, describe only relevant detail of the proposed method. 6) What is the filter size of pooling layer? 7) What is the nature of output? 8) The detail of datasets should be added in the revised manuscript. Reviewer #2: The authors propose a strategy for breast cancer diagnosis using thermograms employing pooling layer known as vector pooling block (VPB) which contains two data pathways, focus on extracting features along horizontal and vertical orientations which collect the global and local features. Furthermore, U-Net, AlexNet, ResNet18 and GoogleNet CNN architectures are used for the segmentation and classification. Overall, the work presented in this manuscript is explained well as the authors compare the proposed approach to other existing techniques. Furthermore, the text is clearly written, the methods described clearly, and the results presented in clean figures and easily to understand. Nevertheless, I have some concerns which will improve the quality of the manuscript further. Please see my detailed comments below. 1. The title “CCN pooling layer”. What is meant by CCN? 2. What’s the challenge for diagnosing breast cancer at an early stage compared to advanced cancer from the view of image feature and ML algorithms? 3. Explain the role of recent works of U-NET CNN segmentation as well in your work. • Maqsood, S., Damasevicius, R., & Shah, F. M. (2021, September). An efficient approach for the detection of brain tumor using fuzzy logic and U-NET CNN classification. In International Conference on Computational Science and Its Applications (pp. 105-118). Springer, Cham. • Du, G., Cao, X., Liang, J., Chen, X., & Zhan, Y. (2020). Medical image segmentation based on u-net: A review. Journal of Imaging Science and Technology, 64, 1-12. • Maqsood, S., Damaševičius, R., & Maskeliūnas, R. (2022). TTCNN: A Breast Cancer Detection and Classification towards Computer-Aided Diagnosis Using Digital Mammography in Early Stages. Applied Sciences, 12(7), 3273. 4. Explain the proposed method in more detail. The given information of the proposed method is insufficient. Explain the working of Figures 3,4,5. 5. What is the main motivation behind choosing the selected database? If the images are color or grayscale? Please mention. 6. Describe the computer on which the experiments were performed (OS, CPU, RAM, etc.) and programming environment (language) used to implement the method. 7. The proposed method should also be compared with other methods to show the worth, effectiveness and superiority of the work. The work lacks the discussion section. 8. Add the discussion section in your manuscript and explain how and why your results are superior to other. The information provided in the experimental results portion is insufficient. 9. Patient selection criteria should be provided to show what stage of patients the system is effective for, or if it is effective for any stage of patients. 10. Information on the diagnosing doctor should be included to show whether this accuracy can be obtained by any physician. 11. The computation efficiency of the proposed method should be addressed. 12. There is a need for language improvement. I found some grammatical error texts in the manuscript. The language of the paper needs a review. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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A Novel CNN pooling layer for breast cancer segmentation and classification from thermograms PONE-D-22-23310R1 Dear Dr. Gaber, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Robertas Damaševičius Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: (No Response) Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: (No Response) Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: (No Response) Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: (No Response) Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: (No Response) Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Authors well revised this manuscript and it can be accepted in the current form. Also, the references section is improved. Reviewer #2: Authors attended correctly to all of my suggestions. So, I am satisfied with the revised version. The revision is acceptable. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** |
| Formally Accepted |
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PONE-D-22-23310R1 A Novel CNN pooling layer for breast cancer segmentation and classification from thermograms Dear Dr. Gaber: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Professor Robertas Damaševičius Academic Editor PLOS ONE |
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