Peer Review History
| Original SubmissionSeptember 1, 2022 |
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PONE-D-22-24455A comparative study of the cortical function during the interpretation of algorithms in pseudocode and the solution of first-order algebraic equationsPLOS ONE Dear Dr. Hernández, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Apr 13 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Chung Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please provide additional details regarding ethical approval in the body of your manuscript. In the Methods section, please ensure that you have specified the name of the IRB/ethics committee that approved your study." 3. Please ensure that you have specified (1) whether consent was informed and (2) what type you obtained (for instance, written or verbal, and if verbal, how it was documented and witnessed). If your study included minors, state whether you obtained consent from parents or guardians. If the need for consent was waived by the ethics committee, please include this information. 4. We note that you have indicated that data from this study are available upon request. PLOS only allows data to be available upon request if there are legal or ethical restrictions on sharing data publicly. For more information on unacceptable data access restrictions, please see http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. In your revised cover letter, please address the following prompts: a) If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. b) If there are no restrictions, please upload the minimal anonymized data set necessary to replicate your study findings as either Supporting Information files or to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. We will update your Data Availability statement on your behalf to reflect the information you provide. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: This article investigates brain activity recorded from EEG using a graph theoretical approach during mathematical and programming tasks. The manuscript is very interesting and well-written. However, I am not confident about the inferences made to brain areas. EEG activity is recorded from the scalp. It is therefore unclear to me how inferences to Brodmann areas can be made. This part of the manuscript therefore needs extensive methodological description or should be removed. The last paragraph of the introduction should conclude by clearly stating the aims and hypotheses of the manuscript, based on previous research. It is not necessary to summarize the organization of a research article as this is always predetermined. Why was the age range of 18-21 years set as a selection criterion? Was the EEG data pre-processed at all? I.e., ocular correction, artefact rejection etc. Otherwise some of the finding might be due to noise in the data Please present some basic descriptives of the sample, ie. Age (mean, SD), gender etc EEG is recorded from the scalp. How were inferences to brain areas (Brodmann areas) made? Was source localization performed? Even if this was the case, source localization is unlikely to determine precise brain areas. Please elaborate on how this analysis was conducted and valid these results are. Reviewer #2: Motivation, novelty and conclusion This submission has a clear and strong motivation to understand the cortical function difference, using EEG, during mathematical and computational challenges. The novelty of the paper is clear and I am happy that the conclusion can be made via a clearly designed empirical study and a relatively solid statistical analysis. Metrics, and research methodology The demonstration of design, shown in Figure 1, is very clear. A minor note, I am very curious about how the order of challenging matters for the final conclusion (e.g., will some level of task randomization influence the final conclusion). I am happy to see researchers apply solid graphical analysis via metrics to define and interpret their conclusions and findings. A few minor notes: I understand the SWN is a very useful metric to understand connectivity. However, it might be very easy to understand for most readers. Maybe we can demonstrate a few examples (either real data examples, or toy examples) to show a better visualization. SWN is known to be very sensitive to network size. This might need further clarification. A similar metric can be L_r/L - C / C_l where r is for randomized graph and l is for lattice graph. The definition of C_rand is not very clear – is it generated through Erdos-Renyi with a fixed number of nodes/edges or with respect to some random weighting? Eg seems to have the same definition of C? I am not suggesting removing the discussion of Eg and El, but it seems to be the SWN analysis is more interesting. Statistical analysis and result This submission uses solid statistical analysis methods to support the majority of their findings, which are mostly innovative and convincing. Some major or minor comments below. [Major] It is not clarified in the paper how replication was performed for each sample. As there are only 16 subjects enrolled in this study, it would be helpful to understand whether the sample replication was performed and so how the sample-level heterogeneity/fixed effect influenced the research conclusion. [Major] Authors applied pairwise non-parametric tests as evidence to show their conclusion. I am curious to understand how the multiple group anova or mixed effect generalized linear model tells us. For example, the difficulty can be a categorical variable, band can be another covariate, computing/mathematical task can be another dummy variable. A few interactions can also be useful (e.g., interaction between problem types and difficulties, etc). This can help us to gather more information related to interactions, rather than the pairwise comparison. [Major] In the supplementary table S1 - S5, which supports the main conclusion of the paper, it includes a large amount of p-values. There is a concern of multiplicity (e.g., false positive with multiple tests). Those p-values less than 0.05 (highlighted) are very tiny (e.g., <10^-5) so I am supportive of most of the key findings but it is worth checking or at least clarifying how the result will change if we apply multiplicity adjustment. [Minor] F3 and F4 are informative but there might be a few ways to improve. E.g., 1 is a relatively important cutoff for small world parameters, so it would be helpful to align with the same y axes range, and to clarify/interpret the result. [Minor] I am not seeing an informative interpretation on Fig 5. However, as you find some significant differences in SWN, I am very keen to see a few demonstrations or toy examples showing how visually the connectivity differs. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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A comparative study of the cortical function during the interpretation of algorithms in pseudocode and the solution of first-order algebraic equations PONE-D-22-24455R1 Dear Dr. Hernández, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Fabio Rapallo, Ph.D. Academic Editor PLOS ONE Additional Editor Comments (optional): Both reviewers agree that the authors have carefully addressed the concerns on the first version. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors have adequately addressed by concerns and feedback. I believe the manuscript is now in a format suitable for publication. Reviewer #2: Thanks for carefully addressing my comments. Most of my comments are well addressed and some pushbacks are reasonable. LGTM to accept. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No ********** |
| Formally Accepted |
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PONE-D-22-24455R1 A comparative study of the cortical function during the interpretation of algorithms in pseudocode and the solution of first-order algebraic equations Dear Dr. Hernández: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Fabio Rapallo Academic Editor PLOS ONE |
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