Peer Review History

Original SubmissionJanuary 21, 2022
Decision Letter - Alejandro Fernandez-Martinez, Editor

PONE-D-22-02015Electron probe microanalysis of the elemental composition of phytoliths from woody bamboo speciesPLOS ONE

Dear Dr. Li,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

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We look forward to receiving your revised manuscript.

Kind regards,

Alejandro Fernandez-Martinez, PhD

Academic Editor

PLOS ONE

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The following statement is declared in regard to our manuscript submission of Electron probe microanalysis of the elemental composition of phytoliths from woody bamboo species: 

All authors have read and approved this version of the article, and due care has been taken to ensure the integrity of the work. No part of this paper has been published or submitted elsewhere. No conflict of interest exists in the submission of this manuscript.)

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Additional Editor Comments:

Dear Dr. Li

I have received the reviews by two experts in the field. They are of the opinion that your manuscript could be published at PlosONE after some revisions are performed. Whereas I share their opinion, I would like to encourage you to revise the English of the text.

I am looking forward to receiving a revised version of the manuscript.

Sincerely

Alejandro Fernandez-Martinez

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

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2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

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3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

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4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: No

Reviewer #2: Yes

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5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: This paper report an interesting research on the electron probe microanalysis of

elemental compositions inside the bamboo phytoliths mounted in the slide. This research is really useful to the plant ecology and paleoenvironmental reconstruction.

Before consideration for publication, some questions should be resolved as the followings:

L35: what is tree genera?

L76: 10.12%, 3.37%

L77: PhytOC should have a complete description as first occurrence.

L218, 3.1

The text description is less frequent, and it needs to be strengthened.

L235, 237, Tables 2-3

The chemical composition content lacks units.

L391, 4.3

The author should add some figure and table to show the differences between phytolith morphotypes.

L412, 4.4

In present, there is no evident that the elemental compositions of phytoliths have taxonomical significance. Can the authors provide more evidences including the measurements of long saddles, etc. ? Otherwise, I suggest the authors delete the relative content.

The format of the reference needs to be corrected.

There are some linguistic errors in the text. It should be polished by an English native speaker.

Reviewer #2: I really appreciate Editor to invite me to review this manuscript written by Tan et al. After a careful reading, this manuscript is quite an original paper looking at the elemental composition of phytoliths from woody bamboo species using Electron probe microanalysis.

It relatively well-written, and well-organized, and systematized, presenting some original results, offering interesting findings referring the formation mechanism of phytoliths using a new technique.

Overall I support publication of this work, yet I have some comments to be considered (moderate revisions).

Figure 5 the decimal places of total values and SiO2 content are different for figure A,B,C. two decimal places are advised.

Line 27-28. “slide mounted” should be “mounted slide”.

Line 35 “tree genera” should be “three genera”

Line 52 “phytolith are normally….”, should be “phytolith morphology is normally”

Line 52. “cells” should be “cell”.

Line 55 “soil and sediments” keep the plural consistent

Line 59 delete the second “to”

Line 73. “lumen phytolith” should be “lumen phytoliths”.

Line 77 change “some research indicates” to “some researches indicate”

Line 89 “the elemental composition of micro-areas in individual phytolith particles”, “composition” should be in plural.

Line 92 “are” should be changed to “is”

Line 98 “are” should be changed to “is”

Line 108. “phytolith” should be “phytoliths”.

Line 112 (iii) What are the characteristic elemental compositions 113 in phytolith is difficult to understand.

Line 162. “10 min” should be “10 mins”.

Line 170. “10 min” should be “10 mins”.

Line 203. insert "phytolith particles included" after "20-30".

Line 207 “Dendrocalamus ronganensis” should be in abbreviation, please check through the paper

Line 219 “phytolith particle were”, change “were” to “was”

Line 231 “phytolith morphologies” should be changed to “phytolith morphotypes”

Line 235 Use phytolith morphotypes

Line 254 “all of Total carbon values” , delete “carbon”, Total should be changed to “total”

Line 282 Please check the use of “CO2”

Line 352 “The EPMA of elemental composition in micro-areas of phytolith in mounted slide are …” can be rephrased as “the EPMA results of phytolith in mounted slide are…”

Line 365 to 366, “from these two plant species”, not from two species, use “measured” is Ok

Line 373. “First” should be “Firstly”.

Line 451 change “morphologies” to “morphotypes”

Line 459 change “composition” to “compositions”

Line 464. change " distinguishe" to " to distinguish".

Supplemental data

S1 table the caption “the EPMA of phytolith….”should be change to “EPMA results of phytolith”

Table format looks not good.

S2 table the caption “the average elemental compositions”, “the” should be removed

S3 table the data should be present according to three EPMA methods.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

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Reviewer #1: No

Reviewer #2: No

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Revision 1

Reponses to reviewers and editors

Reviewer #1: This paper report an interesting research on the electron probe microanalysis of elemental compositions inside the bamboo phytoliths mounted in the slide. This research is really useful to the plant ecology and paleoenvironmental reconstruction. Before consideration for publication, some questions should be resolved as the followings:

1. L35: what is tree genera?

Reply: This was a spelling mistake. “tree genera” should be “three genera”.

2. L76: 10.12%, 3.37%

Reply: We have made these changes.

3. L77: PhytOC should have a complete description as first occurrence.

Reply: Ok. The complete description of "PhytOC" is "phytolith-occluded carbon".

4. L218, 3.1. The text description is less frequent, and it needs to be strengthened.

Reply: We have removed the word “variation” from this section title.

5. L235, 237, Tables 2-3. The chemical composition content lacks units.

Reply: We have added this in table captions.

6. L391, 4.3. The author should add some figure and table to show the differences between phytolith morphotypes.

Reply: We have provide the Figure 3, table 2 and S1 Table in manuscript, which does exhibit the differences between the morphotypes.

7. L412, 4.4. In present, there is no evident that the elemental compositions of phytoliths have taxonomical significance. Can the authors provide more evidences including the measurements of long saddles, etc.? Otherwise, I suggest the authors delete the relative content.

Reply: Thanks for this comment. We have removed the relative content of using the relative abundances of elemental compositions of phytolith to distinguish bamboo species at the genus level, and now only state that the relative abundances of elemental compositions in phytoliths do not show taxonomical significance at the genus level. However, the elemental compositions of phytoliths from these bamboo leaves have ecotypic taxonomical significance in this study. Carnelli et al. investigated the chemical composition of phytoliths from 20 species occurring in subalpine and alpine grasslands, heaths, and woodlands on siliceous bedrock, and found that only woody species produced a high proportion of phytoliths containing aluminum. Thus, we believe the elemental compositions probably do distinguish some plant species, and may have taxonomical significance at the family and/or subfamily level.

8. The format of the reference needs to be corrected.

Reply: We have revised them.

9. There are some linguistic errors in the text. It should be polished by an English native speaker.

Reply: The manuscript has been polished by an English native speaker.

Reviewer: 2

1. Figure 5 the decimal places of total values and SiO2 content are different for figure A,B,C. two decimal places are advised.

Reply: We have changed the format of these numbers.

2. Line 27-28. “slide mounted” should be “mounted slide”.

Line 35 “tree genera” should be “three genera”

Line 52 “phytolith are normally….”, should be “phytolith morphology is normally”

Line 52. “cells” should be “cell”.

Line 55 “soil and sediments” keep the plural consistent

Line 59 delete the second “to”

Line 73. “lumen phytolith” should be “lumen phytoliths”.

Line 77 change “some research indicates” to “some researches indicate”.

Line 89 “the elemental composition of micro-areas in individual phytolith particles”, “composition” should be in plural.

Line 92 “are” should be changed to “is”

Line 98 “are” should be changed to “is”

Line 108. “phytolith” should be “phytoliths”.

Reply: We have made these revisions.

3. Line 112 (iii) What are the characteristic elemental compositions 113 in phytolith is difficult to understand.

Reply: We have changed this sentence as “What are the EPMA results of a phytolith particle?”.

4. Line 162. “10 min” should be “10 mins”.

Line 170. “10 min” should be “10 mins”.

Line 203. insert "phytolith particles included" after "20-30".

Line 207 “Dendrocalamus ronganensis” should be in abbreviation, please check through the paper.

Line 219 “phytolith particle were”, change “were” to “was”

Line 231 “phytolith morphologies” should be changed to “phytolith morphotypes”

Line 235 Use phytolith morphotypes

Line 254 “all of Total carbon values”, delete “carbon”, Total should be changed to “total”

Line 282 Please check the use of “CO2”

Line 352 “The EPMA of elemental composition in micro-areas of phytolith in mounted slide are …” can be rephrased as “the EPMA results of phytolith in mounted slide are…”

Line 365 to 366, “from these two plant species”, not from two species, use “measured” is Ok

Line 373. “First” should be “Firstly”.

Line 451 change “morphologies” to “morphotypes”

Line 459 change “composition” to “compositions”

Line 464. change " distinguishe" to " to distinguish".

Reply: We have made these corrections.

5. Supplemental data

S1 table the caption “the EPMA of phytolith….”should be change to “EPMA results of phytolith”

Table format looks not good.

S2 table the caption “the average elemental compositions”, “the” should be removed.

S3 table the data should be present according to three EPMA methods.

Reply: Thanks for your comments. We have made these revisions.

Attachments
Attachment
Submitted filename: Response to Reviewers.docx
Decision Letter - Andrew W. Rate, Editor

Electron probe microanalysis of the elemental composition of phytoliths from woody bamboo species

PONE-D-22-02015R1

Dear Dr. Li,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Andrew W. Rate, Ph.D.

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

The authors have done a good job of revising this manuscript in response to the comments of two expert reviewers.

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

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2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The authors modify the ms according to the reviewers suggestions. The ms is better than before. In present, it is suitable for publication on PLOS ONE. Pls correct all "Fig" as "Fig.".

Reviewer #2: This response gives me full satisfaction, as authors already did in revised manuscript.

Congrats to all authors on this nice work.

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

**********

Formally Accepted
Acceptance Letter - Andrew W. Rate, Editor

PONE-D-22-02015R1

Electron probe microanalysis of the elemental composition of phytoliths from woody bamboo species

Dear Dr. Li:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Andrew W. Rate

Academic Editor

PLOS ONE

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