Peer Review History
| Original SubmissionOctober 7, 2021 |
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PONE-D-21-30246Predictors and Outcomes of PD-Related Infections due to Filamentous MoldsPLOS ONE Dear Dr. Kanjanabuch, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Mar 17 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Kind regards, Vivekanand Jha Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please provide additional details regarding participant consent. In the Methods section, please ensure that you have specified (1) whether consent was informed and (2) what type you obtained (for instance, written or verbal). If your study included minors, state whether you obtained consent from parents or guardians. If the need for consent was waived by the ethics committee, please include this information. 3. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match. When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section. 4. Thank you for stating the following in the Acknowledgments/ Disclosure Section of your manuscript: TK has received consultancy fees from VISTERRA as a country investigator and current recipient of the National Research Council of Thailand and received speaking honoraria from Astra Zeneca and Baxter Healthcare. JP has received speaking honoraria from Astra Zeneca, Baxter Healthcare, DaVita Healthcare Partners, Fresenius Medical Care, Dialysis Clinics Incorporated, Satellite Healthcare, and served as a Baxter consultant Healthcare, DaVita Healthcare Partners, Fresenius Medical Care, and LiberDi. DJ has previously received consultancy fees, research grants, speaker's honoraria, travel sponsorships from Baxter Healthcare and Fresenius Medical Care, consultancy fees from AstraZeneca, Bayer, and AWAK and speaker's honoraria from Ono and BI & Lilly, and travel sponsorships from Amgen. He is also supported by an Australian National Health and Medical Research Council (NHMRC) Leadership Investigator Grant. All other authors have no financial conflicts of interest to declare. All funders and pharmaceutical companies did not have any role in the study design, data collection, data analysis, data reporting, and the decision to submit for publication. This study was supported by Rachadaphiseksompot Endorsement Fund (CU-GRS_60_12_30_05), Chulalongkorn University, National Research Council of Thailand (156/2560), and Thailand Research Foundation (IRG5780017). Please note that funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows: TK has received consultancy fees from VISTERRA as a country investigator and current recipient of the National Research Council of Thailand and received speaking honoraria from Astra Zeneca and Baxter Healthcare. JP has received speaking honoraria from Astra Zeneca, Baxter Healthcare, DaVita Healthcare Partners, Fresenius Medical Care, Dialysis Clinics Incorporated, Satellite Healthcare, and served as a Baxter consultant Healthcare, DaVita Healthcare Partners, Fresenius Medical Care, and LiberDi. DJ has previously received consultancy fees, research grants, speaker's honoraria, travel sponsorships from Baxter Healthcare and Fresenius Medical Care, consultancy fees from AstraZeneca, Bayer, and AWAK and speaker's honoraria from Ono and BI & Lilly, and travel sponsorships from Amgen. He is also supported by an Australian National Health and Medical Research Council (NHMRC) Leadership Investigator Grant. All other authors have no financial conflicts of interest to declare. All funders and pharmaceutical companies did not have any role in the study design, data collection, data analysis, data reporting, and the decision to submit for publication. This study was supported by Rachadaphiseksompot Endorsement Fund (CU-GRS_60_12_30_05), Chulalongkorn University, National Research Council of Thailand (156/2560), and Thailand Research Foundation (IRG5780017). Please include your amended statements within your cover letter; we will change the online submission form on your behalf. 5. One of the noted authors is a group or consortium [Nephrology Society of Thailand]. In addition to naming the author group, please list the individual authors and affiliations within this group in the acknowledgments section of your manuscript. Please also indicate clearly a lead author for this group along with a contact email address. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Fungal Peritonitis is a dreaded complication of CAPD associated with technique failure, catheter removal, morbidity and mortality. This is a Multi centric study from Thailand whose experience with CAPD is huge given its PD First Policy. Multiple Risk factors were analysed well and my suggestions : 1. In the Materials and Methods section, a paragraph should be added about the specific specialised techniques used in isolation of these fastidious fungal pathogens. There is a passing mention about it in the Discussion section . But more details are required so that it can be corroborated by other centres 2. In the Discussion section , the first para can be omitted since it is a repetition of Results . 3. As a Recommendation based on this Paper do the Authors feel that additional week or two of anti fungal therapy will improve the survival? If they feel so, then it can be added as a recommendation Reviewer #2: The study “Predictors and Outcomes of PD-Related Infections due to Filamentous Molds” is an interesting study. This cohort study included PD patients from the MycoPDICS database of Thailand who had fungal peritonitis between July 2015-June 2020. Authors conclude that Non-hyaline-mold peritonitis had worse survival. Longer duration and higher daily dosage of antifungal treatment were associated with better survival. Comments: 1. The study included 304 fungal peritonitis episodes (yeasts n=133, hyaline molds n=122, and non-hyaline molds n=44) in 303 patients. A total sum of all episodes 133+122+44=299, not 304. 2. Authors have described the causative organism and outcomes of fungal peritonitis episodes only; however, it would be of interest to know the overall peritonitis rate and fungal peritonitis rate in that cohort of patients. 3. Authors have written that 11% (n=33) and 13% (n=40) of the fungal episodes did not receive PD catheter removal and antifungal medication, respectively. Overall, this percentage is a large number, can the authors mention that despite the recommendation of catheter removal in fungal peritonitis episodes soon after diagnosis, why catheters were not removed and antifungals were not given. 4. How many patients were treated with anti-fungal with catheters in situ and their success if any? 5. Each additional day of antifungal therapy beyond the minimum 14-day duration was associated with a 2% reduction in the risk of death (HR=0.98, 95%CI:0.95-0.999). Can authors identify, why these patients’ received antifungals beyond 14 days? was It a persistent ongoing fungal infection or something else? Can authors suggest an optimal duration of anti-fungal therapy? 6. Anti-fungal choices varied? Only 70% received Amphotericin- B, which was the basis of choosing other antifungals and combinations. The only strength of the article is a large number of fungal episodes, and mortality predictors. Authors need to address the above mentioned comments to improve the manuscript. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Krishnaswamy Sampathkumar Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Predictors and outcomes of peritoneal dialysis-related infections due to filamentous molds (MycoPDICS) PONE-D-21-30246R1 Dear Dr. Kanjanabuch, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Rebecca A Hall Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: (No Response) Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: (No Response) Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: (No Response) Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: (No Response) Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: (No Response) Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: (No Response) Reviewer #2: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Dr.Krishnaswamy Sampathkumar Reviewer #2: Yes: Narayan Prasad |
| Formally Accepted |
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PONE-D-21-30246R1 Predictors and outcomes of peritoneal dialysis-related infections due to filamentous molds (MycoPDICS) Dear Dr. Kanjanabuch: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Rebecca A Hall Academic Editor PLOS ONE |
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