Peer Review History

Original SubmissionDecember 17, 2021
Decision Letter - Feng ZHANG, Editor

PONE-D-21-39869Morphological changes in the tracheal system associated with light organs of the firefly Photinus pyralis (Coleoptera: Lampyridae) across life stagesPLOS ONE

Dear Dr. Dunn,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by April 11, 2022. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Feng ZHANG, Ph.D.

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at 

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

2. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match. 

When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section.

3. In your Data Availability statement, you have not specified where the minimal data set underlying the results described in your manuscript can be found. PLOS defines a study's minimal data set as the underlying data used to reach the conclusions drawn in the manuscript and any additional data required to replicate the reported study findings in their entirety. All PLOS journals require that the minimal data set be made fully available. For more information about our data policy, please see http://journals.plos.org/plosone/s/data-availability.

Upon re-submitting your revised manuscript, please upload your study’s minimal underlying data set as either Supporting Information files or to a stable, public repository and include the relevant URLs, DOIs, or accession numbers within your revised cover letter. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. Any potentially identifying patient information must be fully anonymized.

Important: If there are ethical or legal restrictions to sharing your data publicly, please explain these restrictions in detail. Please see our guidelines for more information on what we consider unacceptable restrictions to publicly sharing data: http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. Note that it is not acceptable for the authors to be the sole named individuals responsible for ensuring data access.

We will update your Data Availability statement to reflect the information you provide in your cover letter.

4. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Fireflies are fascinating beetles attracted extensive attention from evolutionary biologists, entomologists, and the public in general. Many species of fireflies, as both adults and larvae, are able to produce lights for defense, communications and other proposes, so oxygen is important of for firefly’s bioluminescent chemical reaction. There is no doubt that the development of the tracheal system and its modification are key to understanding this issue. The authors employ micro-CT scanning to reveal the morphological comparisons across the larva, pupa, and adult life stages, revealing invaluable information for understanding character evolution in a firefly. This work is nicely presented; the illustrations and figures are fantastic; and the conclusions are supported by the given data. I urge to publish this article after a very minor revision.

1. Format: many ‘-’ should be replaced by en dash, which means ‘to’.

2. Data availability: The authors need to deposit the original raw micro-CT slice into online depository. Also, it is better to present 3D videos of the tracheal system of different stages as Supplemental Data.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Revision 1

Kristin N. Dunn

University of Florida

1881 Natural Area Drive

Gainesville, FL 32611

April 8, 2021

Dr. Feng Zhang

Academic Editor

PLOS ONE

Dear Dr. Zhang,

This letter is in response to the review of an original research article titled “Morphological changes in the tracheal system of the firefly Photinus pyralis (Coleoptera: Lampyridae) across life stages” submitted for publication consideration in PLOS ONE.

Addressing the points raised during the edit and review:

File Naming – File names have been checked.

Grant Information – The correct funding information is listed below.

Funding was provided by the National Science Foundation (https://www.nsf.gov/) M.A.B. DEB-1655936, a collaborative research grant with K.S.H. DEB-1655908 and S.M.B. DEB-1655981

Funding for the AMNH Micro-CT scanner was provided via an NSF instrumentation grant MRI-R2 0959384

H.W.H. was supported by a Richard Gilder Graduate School Fellowship

Data Availability – Raw micro-CT scan data have been deposited into Morphosource.org. Access links are below.

Project: https://www.morphosource.org/projects/000434376?locale=en

Larva tifs: https://www.morphosource.org/concern/media/000434523?locale=en

Pupa tifs: https://www.morphosource.org/concern/media/000434527?locale=en

Adult Male tifs: https://www.morphosource.org/concern/media/000434514?locale=en

Adult Female tifs: https://www.morphosource.org/concern/media/000434531?locale=en

Reference List – References remain the same as in the initial submission, with two exceptions: Citations 41-43 were missing from the in text citations. This has been corrected (Page 31). Two citations, 34 and 35, were reordered based on citation date within text citation (Page 40).

En dashes have been placed throughout the manuscript where appropriate.

Additional minor changes:

Bold type removed from title (Page 1).

Spelling correction (Page 5).

Duplicate table captions deleted (Pages 15, 23).

Spelling correction (Page 16).

General grammar throughout.

Although our reviewer suggested videos as supplementary data, we feel that our figures accurately portray the evidence we discuss in the article and that further imaging is not needed. Due to the time requirement of creating such videos, we feel it is in our best interest to move forward with the imaging as is but do appreciate this suggestion and will take this into consideration in future works.

Please address all correspondence concerning this manuscript to me at KristinDunn@ufl.edu

Thank you for your consideration.

Sincerely,

Kristin N. Dunn, MS

Doctoral Candidate, Department of Entomology and Nematology

University of Florida

(757) 619-7094

kristindunn@ufl.edu

Co-Authors:

Dr. Steven Davis

Division of Invertebrate Zoology

American Museum of Natural History

(785) 424-0810
sdavis@amnh.org

Hollister Herhold

Division of Invertebrate Zoology

American Museum of Natural History

hherhold@amnh.org

Dr. Kathrin Stanger-Hall

Department of Plant Biology

University of Georgia

(707) 542-1870

ksh@uga.edu

Dr. Seth M. Bybee

Department of Biology

Brigham Young University

(801) 422-3152

seth.bybee@byu.edu

Dr. Marc Branham

Department of Entomology and Nematology

University of Florida

(352) 273-3915
marcbran@ufl.edu

Attachments
Attachment
Submitted filename: Response to Reviewers.docx
Decision Letter - Feng ZHANG, Editor

Morphological changes in the tracheal system associated with light organs of the firefly Photinus pyralis (Coleoptera: Lampyridae) across life stages

PONE-D-21-39869R1

Dear Dr. Dunn,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Feng ZHANG, Ph.D.

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Formally Accepted
Acceptance Letter - Feng ZHANG, Editor

PONE-D-21-39869R1

Morphological changes in the tracheal system associated with light organs of the firefly Photinus pyralis (Coleoptera: Lampyridae) across life stages

Dear Dr. Dunn:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Feng ZHANG

Academic Editor

PLOS ONE

Open letter on the publication of peer review reports

PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.

We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.

Learn more at ASAPbio .