Peer Review History
| Original SubmissionMay 18, 2021 |
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PONE-D-21-16394 Deep brain stimulation of subthalamic nucleus modulates cortical auditory processing in advanced Parkinson’s Disease PLOS ONE Dear Dr. Renvall, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Dec 03 2021 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Please include your amended statements within your cover letter; we will change the online submission form on your behalf. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: SUMMARY: This study investigated auditory cortical processing in PD patients before and after receiving deep brain stimulation (DBS). Short tone pips (50 ms, 1 kHz) were administered to each ear independently, and equivalent current dipoles were estimated for the auditory evoked fields (AEFs) around 100 ms based on a subset of channels in each hemisphere. UPDRS-III and LEDD were also measured both pre-op and post-op (UPDRS-III and MEG was measured for both DBS-ON and -OFF post-op). The latency difference between contra- and ipsilateral AEF peaks was found to differ between pre-op and DBS-ON post-op. The authors interpret this difference as increased neuronal synchrony in the auditory pathways mediated by DBS. GENERAL COMMENTS: The dataset containing DBS-pre-op and -post-op MEG recordings for PD patients should be commended in and by itself since disease heterogeneity is a substantial challenge in DBS research. The manuscript is clearly written, however it lacks some coherence in the Introduction, in particular. The topic of DBS effects on auditory cortical processing is certainly relevant in the context of both general PD research as well as research on neuromodulation (and DBS in particular). My main concern lies with the choice of dependent variables to analyze (and not to analyze) which I have explained in more detail in the MAJOR CONCERNS section below. PRACTICAL COMMENTS: Line numbers would have been helpful. MAJOR CONCERNS: The latency analyses are not motivated in the Introduction. I suggest dedicating substantial space In the Intro to motivate this analysis since I suspect this was not merely a post-hoc justified analysis. Instead, amplitude differences are briefly discussed in the Introduction. However, there are no amplitude analyses performed in the manuscript. I therefore suggest also performing amplitude analyses. MINOR COMMENTS: ABSTRACT: "Magnetoencephalography provides a feasible tool to study DBS-induced plastic changes and reorganization of both motor and non-motor neural networks in PD" -> I don't see exactly how this is shown or evaluated in this paper, however, I would strongly recommend the authors to include evidence and visualization(s) that could allow for such a conclusion INTRO: In general, the Introduction lacks a bit of coherence - there's almost no logical transition from paragraph to paragraph: 'Degeneration of dopaminergic neurons' > 'DBS is an effective treatment' (no other treatments mentioned or at what stage DBS is usually administered as treatment); 'No neural plasticity induced by DBS' > 'DBS causes strong artifacts in MEG' (why is MEG relevant in this context?); 'measuring cortical modulations generated by DBS' > 'PD patients suffering from impaired hearing' -> besides the already mentioned points regarding stronger motivation for the latency analyses, it seems relevant to also briefly introduce DBS effects on cortical processing and non-motor symptoms in PD more broadly in order to better place the current study in that context. "The PD patients often suffer from a broad spectrum of non-motor signs" -> "PD patients often suffer from a broad spectrum of non-motor signs" "most prominent auditory evoked fields (AEF) at ~100 ms" -> "most prominent auditory evoked fields (AEF[s]) at ~100 ms" "produce well-characterized auditory evoked fields [23-24]." -> "produce well-characterized [AEF]s [23-24]." (Abbrev is introduced two sentences earlier) MATERIALS AND METHODS: "gave an informed written consent" -> "gave informed written consent" "Three of the remaining 15 patients did not tolerate MEG measurement at six months when medication was off" -> I'm assuming the authors here mean "when DBS was off" and not "medication"? "The baseline MEG was measured before the DBS implantation, and the follow-up measurements were conducted at about seven months (see above) after the operation, both with DBS on and off." -> based on hints elsewhere in the text, I'm assuming all three recordings were with medication on? This should be clarified in the text "The DBS frequency was adjusted to 130 Hz before MEG measurements to avoid interference with the head position indicator (HPI) coil signals" -> were all patients kept on their original bi-/monopolar stimulation settings, and if so, did differences in bi-/monopolar settings not affect SNR in the individual patients (after tSSS)? "twice in a row, to exclude formation" -> "twice in a row to exclude formation" "About 100 artifact-free auditory responses were averaged per stimulated ear." -> please provide mean and SD for number of trials across participants "The strongest 100-ms AEFs (N100m) we first scrutinized with a single sensor analysis." -> word order/syntax is slightly off. "The peak response amplitudes were determined by finding the absolute maxima of evoked signals in a time window 80 - 130 ms after the stimulus onset." -> in gradiometers and/or magnetometers? "the vector sum √((/)^2 + (/)^2) of the channel pair showing the maximum signal." -> even tho vector addition is relatively straightforward, I suggest still specifying what the terms refer to in terms of the gradiometer signals in question when the authors decide to include the actual equation "In signal strength comparisons, the vector sums simplify the analysis when the orientation of the neural current changes as a function of time, with only minor accompanying changes in the source location. In such a case, the amplitude measurements from any single channel can be misleading." -> I'm assuming this point is made in relation to combining info from gradiometer pairs (in the (Elekta) Vectorview system), but for those less familiar with the orthogonally oriented gradiometer coils, perhaps integrate a few direct references to the make-up of the sensors in question to help less familiar readers a better grasp of the procedure? "Subsequently, the cortical sources of the N100m responses were searched from contra- and ipsilateral hemispheres using a subset of 10-15 gradiometer pairs around the locus of the maximum response by means of guided current modeling (equivalent current dipole [ECD]; [28]), separately for each subject." -> was the maximum response(s) determined in each hemisphere separately? Please clarify and adjust description earlier accordingly. Also, what was the source of variation between 10-15 gradiometer pairs in the subsets? "Applying the same source model in each data set minimizes variation due to possible differences between source models;" -> I'm having a bit of difficulty reconciling this with the fact that the ECDs were estimated for pre-DBS and post-DBS separately - perhaps the ECD selection procedure is the mediating link here, but then I'm a bit puzzled that the SNR is used as a selection criterion since I would imagine that this would favor the pre-DBS ECD location... could the authors clarify this procedure a bit? "Statistical comparisons of the latency differences between the preoperative AEFs and those obtained with DBS on and DBS off were performed using non-parametric sign test" -> could the authors elaborate on why? This seems a bit peculiar to me given that these are latency values... And how were the amplitudes statistically evaluated - I would assume by repeated measures ANOVA, but not clear from the Results either? "Bonferroni corrected for number of comparisons." -> how many comparisons were corrected for? "The results are reported as mean ± standard error of mean." -> this doesn't align very well with the implementation of non-parametric sign tests. RESULTS: "After artifact removal by tSSS, sources of AEFs were analyzable in both hemispheres in all 15 patients" -> plz provide some means of visualizing the effect of tSSS, as well as elaborate a bit on what is meant by "analyzable" and how this was evaluated. Furthermore, was the effects of tSSS validated by any means, i.e. in order to ensure that MEG signals remaining after tSSS were not still to some extent contaminated by the DBS artefacts? "At the source level, the N100m responses peaked at 97 ± 3 ms and 109 ± 3 ms in the left, and at 106 ± 2 ms and 97 ± 2 ms in the right auditory cortex for the right- and left-sided stimulation in the preoperational condition, and at 95 ± 2 ms and 109 ± 3 ms in the left, and at 107 ± 2 ms and 93 ± 2 ms in the right auditory cortex for the right- and left-sided stimulation in the “DBS on” condition. The ipsi-contralateral difference of N100m peak latencies significantly increased from the preoperative to “DBS on” condition (pooled across the stimulated ears, 10 ± 2 ms vs. 14 ± 1 ms: p = 0.036; see Fig 2)." -> This info would work really well in a table (also including the DBS off condition); surprisingly hard to follow in text form. Also, the text presentation would benefit from some reorganization to better reflect the logic of the analyses/comparisons performed (i.e. I suggest grouping the contra- and ipsi-lateral values together since those are the values that are directly compared). The signficant effects should be tested post-hoc regarding whether contra-latency decreased or ipsi-latency increased (the implicit results of these are referred to in the Discussion and Abstract, but not tested for or explicitly stated in the Results section). "In the “DBS off” condition (data available from 12 subjects), the N100m responses peaked at 98 ± 4 ms and112±6ms in the left, and at 105±4ms and 93±3 ms in the right auditory cortex for the right- and left-sided stimulation." -> And what were the latency values for the PRE condition for those 12 subjects? Also, were DBS-ON and -OFF not compared? "daily dose (LEDD) appeared to decrease" -> "daily dose (LEDD) appeared to decrease[d]" DISCUSSION: "been shown, to some extent, be compensated with DBS" -> "been shown, to some extent, [to] be compensated with DBS" "plastic changes in the auditory system than the correction of unilateral hearing loss [25]." -> "plastic changes in the auditory system [to] the correction of unilateral hearing loss [25]." "Specifically, the decreased contralateral N100m latency here suggests that the effect of DBS is reflected primarily as increased neuronal synchrony (cf. [40])." -> This is not shown in the Results - see my comment for the relevant part of the Results section FIGURES: FIG 1: "The arrow indicates the stimulated (left) ear." -> I don't see any arrows in the figure... -> I suggest clarifying which of the highlighted sensors are gradiometers and which are magnetometer(s) -> I also suggest adding "ipsilateral" and "contralateral" (or similar) labels above the two channel highlights -> if at all possible, would be lovely to see the traces in the highlighted sensors including the variance (e.g. via shading or similar) FIG 2: "The interhemispheric latency difference increased from preoperative to postoperative DBS on condition." -> "The interhemispheric latency difference increased from preoperative to postoperative DBS on condition." -> Legend missing - not immediately clear what full, dotted and broken lines refer to -> Top: are the values for n=15 for PRE and DBS-ON and then for n=12 for DBS-OFF, cuz then I suggest splitting up into two different plots - one for PRE and DBS-ON for n=15, and one for all three conditions for n=12 (or similar) - but not for different n's in the same plot. -> Bottom: would be very nice to see these traces for the group average (incl. variance estimates) and not only for a single subject. ********** 6. 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| Revision 1 |
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Deep brain stimulation of subthalamic nucleus modulates cortical auditory processing in advanced Parkinson’s Disease PONE-D-21-16394R1 Dear Dr. Renvall, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Tuhin Virmani Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors have fully addressed all my concerns, and I find the manuscript to have greatly improved. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Andreas Højlund |
| Formally Accepted |
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PONE-D-21-16394R1 Deep brain stimulation of subthalamic nucleus modulates cortical auditory processing in advanced Parkinson’s Disease Dear Dr. Renvall: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Tuhin Virmani Academic Editor PLOS ONE |
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