Peer Review History
| Original SubmissionFebruary 25, 2021 |
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PONE-D-21-05646 The UK Chinese population with kidney failure: Clinical characteristics, management and access to kidney transplantation using 20 years of UK Renal Registry and NHS Blood and Transplant Data PLOS ONE Dear Dr. Wong, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. The Editor reviewed the manuscript and recommends several changes and corrections. Please read specific comments. Reviewer # 1: The paper by Wong et al goes over the differences in causes of renal failure, access to transplantation and other characteristics in UK White and UK Chinese patient populations. The paper appears well written and the study was methodologically sound. It is surprising that statistically significant differences were found when the Chinese cohort was only about 500 patients in size and adjustment by regression confounders was applied. There is certainly no reason to question the presented results, though I speculate that applying more conservative testing with verification of logistic regression’s assumptions (which almost everyone seems to skip nowadays) would lead to problems related to sample size. Good points were made regarding higher rates of diabetes and possible need for a special method for GFR calculation in Chinese patients Reviewer # 2: Please address the following points: The analysis is a comparison of Chinese and White populations listed in the UK registry system. Please provide details of exclusions (percentages) for Chinese and White populations. Please explain more precisely the category as “being listed on the deceased donor waiting list for 2 years” and “kidney transplantation at 3 years after start of KRT”. Does the first category mean to be listed at least 2 years and more? Does the kidney transplantation category mean kidney transplantation within 3 years? Please clarify these terms. Also, pre-emptive transplantation is from deceased or live donor? What mean “data on co-morbidity were incomplete”. Please explain “The UKRR does not collect individual-level SES data. Index of Multiple Deprivation (IMD) scores were used as an area level measure of SES” as this statement is not clear. The authors collect and use SES data but then say that such data are not collected. Please clarify and explain better SES data collection. Please explain Index of Multiple Deprivation (IMD) scores as an average reader is not familiar with this system. It is also not clear what is most deprived vs. least deprived and differences among coutries. Please explain. How the authors calculated IMD for missing data? The statement is that IMD for England was used. Please explain. The statistical analysis is not clear for missing data “We identified missing data and investigated for any patterns of missingness.” The statement “Intervals (CIs) and p-values) to investigate the relationships between Chinese ethnicity (UK Chinese versus UK White) and the five outcomes listed above” is not clear. Where is listed above? Please confirm the statement “The UK Renal Registry has been granted a section 251 exemption by the Health Research Authority, allowing the sharing and processing of identifiable patient information from kidney units without individual patient consent.” The Results section provide that “. 0.5% (n=501) were of Chinese ethnicity, 76% (n=70,575) were White”. What is the remaining percentage? Please clarify. Please explain how in Table 3, the analysis was adjusted for SES for cases that have missing data? The Materials and Methods state that there are many missing data. Please provide more attention for the results showing differences between males and females. What is the reason for the difference in Chinese males to be so significantly different than Chinese females? Please confirm or refute the assumption that all differences revealed in this manuscript are refer exclusively to the Chinese males. Please try to explain this unique observation by possible different variables. The Discussion section has conclusions about the entire Chinese population (males and females) whereas the results showed to be concentrated in Chinese males. Please clarify and make additional analyses to make sure what conclusions refer to the entire Chinese population (males and females with the same rates in reported observations) vs. conclusions exclusively found in Chinese male population. Please make very clear what observations are in which Chinese groups. The limitation section should be more specific as well as the conclusion section needs to reflect the documented observations regarding gender disparities. The authors need to confirm the entire analysis in Chinese male vs. Chinese female population. The differences at different levels of analyses need to be clearly indicated. The Results and Discussion sections need to be adjusted. For Lab, Study and Registered Report Protocols: These article types are not expected to include results but may include pilot data. Please submit your revised manuscript by Aug 21 2021 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Stanislaw Stepkowski Academic Editor PLOS ONE Additional Editor Comments (if provided): The Editor reviewed the manuscript and recommends several changes and corrections. Please read specific comments. Reviewer # 1: The paper by Wong et al goes over the differences in causes of renal failure, access to transplantation and other characteristics in UK White and UK Chinese patient populations. The paper appears well written and the study was methodologically sound. It is surprising that statistically significant differences were found when the Chinese cohort was only about 500 patients in size and adjustment by regression confounders was applied. There is certainly no reason to question the presented results, though I speculate that applying more conservative testing with verification of logistic regression’s assumptions (which almost everyone seems to skip nowadays) would lead to problems related to sample size. Good points were made regarding higher rates of diabetes and possible need for a special method for GFR calculation in Chinese patients Reviewer # 2: Please address the following points: The analysis is a comparison of Chinese and White populations listed in the UK registry system. Please provide details of exclusions (percentages) for Chinese and White populations. Please explain more precisely the category as “being listed on the deceased donor waiting list for 2 years” and “kidney transplantation at 3 years after start of KRT”. Does the first category mean to be listed at least 2 years and more? Does the kidney transplantation category mean kidney transplantation within 3 years? Please clarify these terms. Also, pre-emptive transplantation is from deceased or live donor? What mean “data on co-morbidity were incomplete”. Please explain “The UKRR does not collect individual-level SES data. Index of Multiple Deprivation (IMD) scores were used as an area level measure of SES” as this statement is not clear. The authors collect and use SES data but then say that such data are not collected. Please clarify and explain better SES data collection. Please explain Index of Multiple Deprivation (IMD) scores as an average reader is not familiar with this system. It is also not clear what is most deprived vs. least deprived and differences among coutries. Please explain. How the authors calculated IMD for missing data? The statement is that IMD for England was used. Please explain. The statistical analysis is not clear for missing data “We identified missing data and investigated for any patterns of missingness.” The statement “Intervals (CIs) and p-values) to investigate the relationships between Chinese ethnicity (UK Chinese versus UK White) and the five outcomes listed above” is not clear. Where is listed above? Please confirm the statement “The UK Renal Registry has been granted a section 251 exemption by the Health Research Authority, allowing the sharing and processing of identifiable patient information from kidney units without individual patient consent.” The Results section provide that “. 0.5% (n=501) were of Chinese ethnicity, 76% (n=70,575) were White”. What is the remaining percentage? Please clarify. Please explain how in Table 3, the analysis was adjusted for SES for cases that have missing data? The Materials and Methods state that there are many missing data. Please provide more attention for the results showing differences between males and females. What is the reason for the difference in Chinese males to be so significantly different than Chinese females? Please confirm or refute the assumption that all differences revealed in this manuscript are refer exclusively to the Chinese males. Please try to explain this unique observation by possible different variables. The Discussion section has conclusions about the entire Chinese population (males and females) whereas the results showed to be concentrated in Chinese males. Please clarify and make additional analyses to make sure what conclusions refer to the entire Chinese population (males and females with the same rates in reported observations) vs. conclusions exclusively found in Chinese male population. Please make very clear what observations are in which Chinese groups. The limitation section should be more specific as well as the conclusion section needs to reflect the documented observations regarding gender disparities. The authors need to confirm the entire analysis in Chinese male vs. Chinese female population. The differences at different levels of analyses need to be clearly indicated. The Results and Discussion sections need to be adjusted Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Thank you for including your ethics statement: "The UK Renal Registry has been granted a section 251 exemption by the Health Research Authority, allowing the sharing and processing of identifiable patient information from kidney units without individual patient consent". a. Please amend your current ethics statement to include the full name of the ethics committee/institutional review board(s) that reviewed and approved the UK Renal Registry research programme. Please include relevant approval numbers. In addition, please provide additional information about the patient records/samples used in your retrospective study, including whether all data were fully anonymized before you accessed them, and also state whether the ethics committee that approved the research programme waived the need for written informed consent. b. Once you have amended this/these statement(s) in the Methods section of the manuscript, please add the same text to the “Ethics Statement” field of the submission form (via “Edit Submission”). For additional information about PLOS ONE ethical requirements for human subjects research, please refer to http://journals.plos.org/plosone/s/submission-guidelines#loc-human-subjects-research. 3. We note that your study involved tissue/organ transplantation. Please provide the following information regarding tissue/organ donors for transplantation cases analyzed in your study. a. Please provide the source(s) of the transplanted tissue/organs used in the study, including the institution name and a non-identifying description of the donor(s). b. Please state in your response letter and ethics statement whether the transplant cases for this study involved any vulnerable populations; for example, tissue/organs from prisoners, subjects with reduced mental capacity due to illness or age, or minors. - If a vulnerable population was used, please describe the population, justify the decision to use tissue/organ donations from this group, and clearly describe what measures were taken in the informed consent procedure to assure protection of the vulnerable group and avoid coercion. - If a vulnerable population was not used, please state in your ethics statement, “None of the transplant donors was from a vulnerable population and all donors or next of kin provided written informed consent that was freely given.” c. In the Methods, please provide detailed information about the procedure by which informed consent was obtained from organ/tissue donors or their next of kin. In addition, please provide a blank example of the form used to obtain consent from donors, and an English translation if the original is in a different language. d. Please indicate whether the donors were previously registered as organ donors. If tissues/organs were obtained from deceased donors or cadavers, please provide details as to the donors’ cause(s) of death. e. Please provide the participant recruitment dates and the period during which transplant procedures were done (as month and year). f. Please discuss whether medical costs were covered or other cash payments were provided to the family of the donor. If so, please specify the value of this support (in local currency and equivalent to U.S. dollars). 4. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match. When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section. 5. Thank you for stating the following in the Acknowledgments Section of your manuscript: This research is supported by the University of Bristol Elizabeth Blackwell Institute Clinical Primer award, which receives a contribution from the Wellcome Institute Strategic Support Fund. PB, FJC, AC, Y-BS have nothing to disclose. We note that you have provided funding information that is not currently declared in your Funding Statement. However, funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows: This research is supported by the University of Bristol Elizabeth Blackwell Institute Clinical Primer award, which receives a contribution from the Wellcome Institute Strategic Support Fund. PB, FJC, AC, Y-BS have nothing to disclose. Please include your amended statements within your cover letter; we will change the online submission form on your behalf. 6. Please amend either the abstract on the online submission form (via Edit Submission) or the abstract in the manuscript so that they are identical. 7. We note you have included a table to which you do not refer in the text of your manuscript. Please ensure that you refer to Table 2 in your text; if accepted, production will need this reference to link the reader to the Table. 8. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. 9. We noticed you have some minor occurrence of overlapping text with the following previous publication(s), which needs to be addressed: - https://www.journaltocs.ac.uk/index.php?action=tocs&journalISSN=1460-2385 -https://www.era-edta.org/VirtualCongress2020/Accepted_Abstracts_ERAEDTA_2020.pdf -https://academic.oup.com/ndt/article/35/Supplement_3/gfaa142.P0772/5853027 In your revision ensure you cite all your sources (including your own works), and quote or rephrase any duplicated text outside the methods section. Further consideration is dependent on these concerns being addressed. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The paper by Wong et al goes over the differences in causes of renal failure, access to transplantation and other characteristics in UK White and UK Chinese patient populations. The paper appears well written and the study was methodologically sound. It is surprising that statistically significant differences were found when the Chinese cohort was only about 500 patients in size and adjustment by regression confounders was applied. There is certainly no reason to question the presented results, though I speculate that applying more conservative testing with verification of logistic regression’s assumptions (which almost everyone seems to skip nowadays) would lead to problems related to sample size. Good points were made regarding higher rates of diabetes and possible need for a special method for GFR calculation in Chinese patients. Reviewer #2: Please address the following points: The analysis is a comparison of Chinese and White populations listed in the UK registry system. Please provide details of exclusions (percentages) for Chinese and White populations. Please explain more precisely the category as “being listed on the deceased donor waiting list for 2 years” and “kidney transplantation at 3 years after start of KRT”. Does the first category mean to be listed at least 2 years and more? Does the kidney transplantation category mean kidney transplantation within 3 years? Please clarify these terms. Also, pre-emptive transplantation is from deceased or live donor? What mean “data on co-morbidity were incomplete”. Please explain “The UKRR does not collect individual-level SES data. Index of Multiple Deprivation (IMD) scores were used as an area level measure of SES” as this statement is not clear. The authors collect and use SES data but then say that such data are not collected. Please clarify and explain better SES data collection. Please explain Index of Multiple Deprivation (IMD) scores as an average reader is not familiar with this system. It is also not clear what is most deprived vs. least deprived and differences among coutries. Please explain. How the authors calculated IMD for missing data? The statement is that IMD for England was used. Please explain. The statistical analysis is not clear for missing data “We identified missing data and investigated for any patterns of missingness.” The statement “Intervals (CIs) and p-values) to investigate the relationships between Chinese ethnicity (UK Chinese versus UK White) and the five outcomes listed above” is not clear. Where is listed above? Please confirm the statement “The UK Renal Registry has been granted a section 251 exemption by the Health Research Authority, allowing the sharing and processing of identifiable patient information from kidney units without individual patient consent.” The Results section provide that “. 0.5% (n=501) were of Chinese ethnicity, 76% (n=70,575) were White”. What is the remaining percentage? Please clarify. Please explain how in Table 3, the analysis was adjusted for SES for cases that have missing data? The Materials and Methods state that there are many missing data. Please provide more attention for the results showing differences between males and females. What is the reason for the difference in Chinese males to be so significantly different than Chinese females? Please confirm or refute the assumption that all differences revealed in this manuscript are refer exclusively to the Chinese males. Please try to explain this unique observation by possible different variables. The Discussion section has conclusions about the entire Chinese population (males and females) whereas the results showed to be concentrated in Chinese males. Please clarify and make additional analyses to make sure what conclusions refer to the entire Chinese population (males and females with the same rates in reported observations) vs. conclusions exclusively found in Chinese male population. Please make very clear what observations are in which Chinese groups. The limitation section should be more specific as well as the conclusion section needs to reflect the documented observations regarding gender disparities. The authors need to confirm the entire analysis in Chinese male vs. Chinese female population. The differences at different levels of analyses need to be clearly indicated. The Results and Discussion sections need to be adjusted. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Dulat Bekbolsynov Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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The UK Chinese population with kidney failure: Clinical characteristics, management and access to kidney transplantation using 20 years of UK Renal Registry and NHS Blood and Transplant Data PONE-D-21-05646R1 Dear Dr. Wong, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Stanislaw Stepkowski Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-21-05646R1 The UK Chinese population with kidney failure: Clinical characteristics, management and access to kidney transplantation using 20 years of UK Renal Registry and NHS Blood and Transplant Data Dear Dr. Wong: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Stanislaw Stepkowski Academic Editor PLOS ONE |
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