Peer Review History
| Original SubmissionApril 25, 2021 |
|---|
|
PONE-D-21-13730 Prophylactic anticoagulants to prevent venous thromboembolism in patients with nephrotic syndrome – a retrospective observational study. PLOS ONE Dear Dr. Welander, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Both reviewers see value in this retrospective studies but they raise a number of issues that should be addressed and major revision of this article is required before a decision regarding publication can be made. Please submit your revised manuscript by Jul 16 2021 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Hugo ten Cate, MD, PhD Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2.We note that you have indicated that data from this study are available upon request. PLOS only allows data to be available upon request if there are legal or ethical restrictions on sharing data publicly. For information on unacceptable data access restrictions, please see http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. In your revised cover letter, please address the following prompts: a) If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially identifying or sensitive patient information) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. b) If there are no restrictions, please upload the minimal anonymized data set necessary to replicate your study findings as either Supporting Information files or to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. Please see http://www.bmj.com/content/340/bmj.c181.long for guidelines on how to de-identify and prepare clinical data for publication. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. We will update your Data Availability statement on your behalf to reflect the information you provide. Additional Editor Comments: Reviewer 2: The authors describe retrospective data on venous thromboembolism a in 95 patients with nephrotic syndrome (NS). It is an observational study including a heterogeneous group of patients with NS due to varying underlying conditions. The aim of the study was to investigate the effectiveness and risks of prophylactic anticoagulants. The authors write that PAC treatment was based on local guidelines using LMWH as initial therapy in patients with a albumin < 20g/l or 25g/L depending on underlyging pathology. For me it is unclear what dose is recommended according to the local guidelines. I would advise the authors to include this in the text. The study design (retrospective observational) does not allow the investigators to answer the question regarding effectiveness of PAC, as only an RCT can provide these answers. The authors clearly describe these limitations of the study in the discussion part. However the study is clinically relevant. The authors describe a relative large cohort of cases with NS. The authors describe the frequency of anticoagulant treatment in NS patients in the real world. They also describe the VTEs and bleeding complications in NS patients using PAC and no PAC. The data give an insight in the clinical practice and the risks of VTE and bleeding in the real world. The investigators also investigate the risk factors for venous thrombosis. They not only include the degree of hypoalbuminemia, but also the duration of the hypoalbuminemia using a clever method of extrapolation. The authors find a more than 20-fold increased risk of venous thromboembolism in the time < 20g/L compared with time > 20 g/L, irrespective of PAC use. In clinical practice the duration of hypoalbuminemia is not used as a determinant to start PAC and clinical implications of this finding remain unclear. The authors also found a high incidence of arterial thrombosis in patients with NS. The authors do not mention if there is a correlation between (degree of) hypoalbuminemia and arterial thrombosis. It would be interesting to include this in the analysis. In general thrombophilia is not believed to be an important risk factor for arterial thrombosis. However in specific circumstances thrombophilia might play a role. It would be of interest to know if hypoalbuminemia and arterial thrombosis are linked in this cohort. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: I Don't Know ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Abstract - Line 19: ‘although not significant’: than you should not conclude that VTE rates and bleeding rates are lower Introduction - Line 33-34: RVT in 25-30% and DVT in 15% of NS patients. Please explain in Discussion section why these numbers are much lower in your study, even in no-PAC patients? - Line 36-41: references to original publications for these statements are missing - Line 62-64: the aim is clearly stated. Please make sure your conclusions match the research question and aim of the study. Methods - Line 68: is this single center or multicenter? - Line 80-82: follow-up time is during the whole nephrotic time span, but minimum of 12 months. Why is, according to table 1, the median follow-up 365 with IQR 262-366? This indicates that 50% has shorter follow up than 365 days? - Line 86-87: ‘patients who started anticoagulants due to other indications than VTE prophylaxis were censored’ : please explain. Does this mean that patients in no-PAC group developing a venous or arterial thrombotic event, and thus started on antithrombotic medication, were excluded? - Outcomes line 95-97: you report also on arterial thrombotic events (myocardial infarction). How could bleeding events, especially minor bleedings, be retrospectively retrieved? - Line 100: if routine treatment for NS patients is PAC, why does more than half of your patients is in the no-PAC group? How was the decision on PAC made, based on what criteria? - Line 103: local guidelines: Please list dosages of LMWH. Were DOACS also prescribed? - Methods: how was period on and off PAC retrospectively retrieved? Results - Table 1: ‘U-albumin/U-creatinine ratio was missing for 8 PAC and 6 no PAC patients. But according to the text of figure 1, you started your patient inclusion by selecting all patients with U-albumin/U-creatinine >300mg/ml in Vasternorlland between 2010-2019. If true, this ratio could never be missing? Please explain. - Figure 2: Were patients with bleedings and VTE different patients? Or did some of the bleedings occur in patients with VTE? And how about the deaths? - Line 195-201: please provide some more information on the bleeding events. The fact that most minor bleedings were subcapsular bleedings after kidney biopsy suggests that there is some reporting bias. The nephrologist will collect information on these bleedings, while other minor bleedings (e.g. severe epistaxis, hematuria etc) might not be noted in the medical records? - Line 203: ‘in this material’ : its inappropriate to speak about material when speaking about patients - Line 207: please report median number of S/P-albumin measurements per patient where this interpolation is based on. - Table 4: with only 7 VTE events in the whole study, would it be legitimate to perform these calculations and statistics? Please discuss - Fig 2: Patients with both VTE and bleedings. Was therapy changed after bleeding or ischemic events? Discussion - Bleeding events were retrospectively collected, which potentially leads to under-reporting of bleedings, especially the minor bleedings. Can conclusions on safety of PAC be made based on your research? Please discuss. - Line 312: it is not appropriate to speak about material when it comes to patients - Please discuss bias more extensively (selection bias, reporting bias,etc) Speculate on missing data. Conclusion: The conclusion doesn’t answer the main question (aim) of the study, namely: ‘aims to investigate the effectiveness and risks of prophylactic anticoagulants’ according to the abstract and introduction. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
|
Prophylactic anticoagulants to prevent venous thromboembolism in patients with nephrotic syndrome – a retrospective observational study. PONE-D-21-13730R1 Dear Dr. Welander, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Hugo ten Cate, MD, PhD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: I Don't Know Reviewer #2: N/A ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I do not have any additional comments. All previous comments have been addressed in the revised manuscript by the authors Reviewer #2: The authors describe retrospective data on the incidence of venous thrombosis in 95 patients with nephrotic syndrome with or without PAC treatment. Because of the retrospective nature information bias and selection bias are likely present. In the revised version of the manuscript the authors clearly identify these limitations and conclusions are made carefully. The study however still provides meaningful knowledge in the field. These real world data generated outside the controlled clinical trial setting give insight in the incidences of thrombosis and clinically relevant bleeding. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: Yes: Kristien Winckers |
| Formally Accepted |
|
PONE-D-21-13730R1 Prophylactic anticoagulants to prevent venous thromboembolism in patients with nephrotic syndrome – a retrospective observational study. Dear Dr. Welander: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Professor Hugo ten Cate Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .