Peer Review History

Original SubmissionMarch 31, 2021
Decision Letter - Majlinda Lako, Editor

PONE-D-21-10675

Isolation and long-term expansion of murine epidermal stem-like cells

PLOS ONE

Dear Dr. Xia,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

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We look forward to receiving your revised manuscript.

Kind regards,

Majlinda Lako

Academic Editor

PLOS ONE

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Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Partly

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2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

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3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

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4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

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5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The manuscript describes an incremental development of protocols to culture murine primary keratinocytes. The experiments used to indicate that a variant of KFSM medium containing 0.06mM Ca2+ permits long term expansion of primary murine keratinocytes are robust and the data do support the idea of long term culture. Reporting conditions for long term culture alone are not novel since other publications such as Hager et al Journal of Investigative Dermatology, 1999,112(6):971-976, have described similar findings, however the authors of this current manuscript have extended the transcriptomic analysis of the keratinocytes subjected to their culture conditions.

That said, it is unusual for primary cells to undergo at least 70 passages so it would have been useful if the authors could have provided an explanation for this enhanced proliferative capacity. Their data imply a degree of stem cell like characteristics in the cell population they generate (eg CD34, CD200, expression) but they have not indicated why such stem cells have this proliferative capacity. It would be useful to measure telomere lengths, expression of mTert and activity of the murine telomerase holoenzyme complex in addition to markers of cell senescence such as expression of p16 INK4a. Moreover, they do not provide analyses of the karyotype at early and late passage numbers. These additional data could be supportive of a putative epidermal stem cell identity especially since the doubling time of the cells grown in low calcium KSFM seems to decrease substantially after passage 20 (figure 2C). This could of course imply the selection of a more highly proliferative cell population but it could also imply cell transformation

Another drawback of the data provided is that there seems to be no attempt to correlate transcriptomic identity of the cell population to passage number. Given that doubling times decrease, it may be assumed that the transcriptome of the bulk population does change so taking a “snapshot” of gene expression does not provide an accurate description of a potentially changeable phenotypic environment. This potential change with increasing passage number would need to be quantified before the method can be confirmed to produce larger numbers of murine keratinocytes that are useful for studying epidermal biology and disease as stated in the discussion section. If data from these studies can be provided, the findings may be of interest to the readership of PLOSone

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Reviewer #1: No

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Revision 1

, we provide point-by-point responses to the reviewer’s comments and outline changes made in adherence to Journal’s requirements:

1. Their data imply a degree of stem cell like characteristics in the cell population they generate (eg CD34, CD200, expression) but they have not indicated why such stem cells have this proliferative capacity. It would be useful to measure telomere lengths, expression of mTert and activity of the murine telomerase holoenzyme complex in addition to markers of cell senescence such as expression of p16 INK4a.

Authors’ responses: The keratinocyte lines reported here displayed some stem cell characteristics, including unlimited self-renew and prolonged in vitro culture capabilities, in addition to the expression of stem cell genes. Our new experiments, as suggested by the reviewer, showed that neither p16INK4a expression nor telomere length were significantly altered in cells at low and high passages. suggesting long-term stability of these cells.

2. They do not provide analyses of the karyotype at early and late passage numbers.

Authors’ responses: This was an excellent point we had omitted previously. Karyotyping showed that even the primary mouse keratinocytes (P0) had significantly increased chromosomes consistent with what was reported before (Hammiller, 2015). We detected, accordingly, tetraploid or hyperdiploid chromosomes in our keratinocyte lines in both the early and late passages. These observations suggest that the chromosomes, originally unstable in primary keratinocytes, became relatively stable in the cell lines.

3. Another drawback of the data provided is that there seems to be no attempt to correlate transcriptomic identity of the cell population to passage number. Given that doubling times decrease, it may be assumed that the transcriptome of the bulk population does change so taking a “snapshot” of gene expression does not provide an accurate description of a potentially changeable phenotypic environment.

Authors’ responses: With the additional data on telomere, p16 INK4a expression and chromosomal numbers, and the fact that the doubling time became stable in cells at “high (>30) passages”, we reason that the high passaging cell lines maintain stable molecular signatures, and hence, gene expression.

Attachments
Attachment
Submitted filename: cover letter-plos one resubmission.pdf
Decision Letter - Majlinda Lako, Editor

Isolation and long-term expansion of murine epidermal stem-like cells

PONE-D-21-10675R1

Dear Dr. Xia,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

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If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Majlinda Lako

Academic Editor

PLOS ONE

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

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2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

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3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

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5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

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6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: (No Response)

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7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Formally Accepted
Acceptance Letter - Majlinda Lako, Editor

PONE-D-21-10675R1

Isolation and long-term expansion of murine epidermal stem-like cells

Dear Dr. Xia:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Majlinda Lako

Academic Editor

PLOS ONE

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