Peer Review History
| Original SubmissionFebruary 2, 2021 |
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PONE-D-20-40338 The consequences of using different epoch lengths on the classification of accelerometer based sedentary behaviour and physical activity PLOS ONE Dear Dr. Altenburg, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Your paper was reviewed by two subject experts, who also reviewed the previously submitted version of your paper. As you will see below, both still have some major concerns about the paper which must be addressed ahead of resubmission. Of particular importance, Reviewer 2 suggests your conclusions do not support the data presented in the paper. Please ensure this observation is fully considered in your response. Please submit your revised manuscript by May 21 2021 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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We will update your Data Availability statement on your behalf to reflect the information you provide. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: No ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I thank the authors for providing good answers to my comments and making appropriate revisions to the manuscript. Though the manuscript has improved considerably, I have some more comments, partly as a follow-up of my previous comments, that need to be considered. 1) Regarding the focus on epoch length or cut point scaling, this is obviously two sides of the same coin. I thank the authors for revising their title to reflect the focus on epoch durations, which I believe is a much easier conceptualization than rescaling of cut points, since (as argued previously) cut points obviously must be scaled when varying the epoch setting. However, besides the title, the rest of the manuscript largely focus on rescaling of cut points. Please consider improving the readability further by focusing on the epoch setting throughout. The rescaling of the cut points is a consequence of the analysis of the different epoch settings and can be described as is in the methods. 2) One more issue of conceptualization. The manuscript focuses throughout on the misclassification of epochs and intensities of PA. If it can be verified by the criterion (video observation) that every single epoch is in fact of the prescribed intensity this makes sense. However, given the application of three different types of information regarding PA/intensity classification, that is, observation, heart rate, and accelerometry, which do not capture the same information, I ask the authors to consider whether “misclassification” could be conceptualized differently. Instead of stating that short epochs misclassified dancing time as sedentary, I would say that a short epoch setting has increased sensitivity for detecting sedentary bouts during dancing. Since short periods of standing still during dancing were not marked, I would argue this finding is not a misclassification. From a perspective of classifying movement (not energy consumption), these periods are probably correctly classified. For sedentary activities, this issue is more complex. Though the accelerometers probably correctly have identified movement (acceleration), as stated line 346-, this time could possibly still be classified as sedentary given the definition of being seated. Please note that if longer periods of activity by default is classified at a specific intensity (as done herein), longer epochs will obviously be best suited to classify because variations/interruptions are ignored by the criterion. Please consider to reconceptualize to moderate the conclusions, or at least elaborate on this issue (as partly already done) in the discussion. 3) It is concluded that a 15-second epoch setting should be used for analysis of PA. This conclusion contrasts the findings by Aadland et al (your ref 19), showing that every second counts, and the findings by Aadland et al (https://doi.org/10.1080/02640414.2019.1693320), showing that a 1-sec epoch setting provided better information of the relationship between PA and cardiometabolic health than 10- and 60-sec epoch settings, thus leading the authors to conclude a 1-sec epoch should be applied. Please include the latter study to inform the discussion and conclusion. Related to the comment above, these findings probably result from increased sensitivity to capture short burst of activity throughout the day. 4) Please consider and correct the description of how 5-sec epochs were constructed line 183-. I guess this text should state “the first 2 epochs (i.e. first 4 seconds) and the first 7 epochs (i.e. first 14 seconds), and half of the counts of the subsequent 2-second epoch (i.e. 5th and 15th second, respectively). ”? 5) The Man Whitney U test is a test for two independent samples. Given that the data on the different three epoch settings derive from the same individuals, a repeated measures test suitable for three “timepoints” should be applied. 6) The results seem focused on comparison of two epoch settings, e.g., line 293- (“using longer epochs, total (533 vs 385 min/day) …”), but must reflect the three settings now included. Please correct. 7) There are few typos, e.g., line 459 (hear). Please correct. Reviewer #2: Dear authors Thank you for responding to our request to include also 5-second epochs. By doing that, it is more apparent that your study does not support your conclusions, and actually is in favor for a shorter epoch, i.e. 5 seconds. Firstly, in the controlled study, you have a priory assigned 8 activities as sedentary and dancing as physical activity across the 7 minutes included. If the individual moves spontaneously during this (as they may not be able to be still; I have seen this many times in my own studies), this will be captured more easily by the 5-second epoch but at the same time it is evaluated as miss-classification due to your a priory categorization. In fact, the 5-second epoch tells what the child actually is doing. By using a 60-second epoch, the spontaneous variation is “filtered” away. Adolescents probably have more ability to be still and your results show that the misclassification in this age-group was very low. Further, based on the lowest amount of time as sedentary during dancing for 15-second epochs you draw the conclusion that this is the preferable epoch. However, as you also pointed out in the second paragraph on page 20, dancing may not be a continuous MVPA activity, but rather more variated. Secondly, your free-living study demonstrate the same pattern as in for example Aadland et al, that with increasing epoch length there is less total time SB, more total time LPA, slightly less total time MPA and less total time VPA. This pattern is the result of, that with less allowance for variation, the closer the value come to the middle intensities LPA and MPA. In addition, LPA and MPA are very broad categories, which will easily “take over” the time with increasing epoch length. Further, when you restrict data by bouts, it is even more difficult for the variation that is captured by the 5-second to be inside the boundary of the intensity category. Hence, that is why you see the reduction of SB with increasing epoch length using the shortest bout (0-9.9 min), which is more similar to the total time, and for increasing bout length as well. My conclusion would be the opposite to yours. I find it a little puzzling in your controlled study that the 5-second epoch is more similar to the 60-second epoch for % of time classified as SED, than to the 15-second epoch. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Eivind Aadland Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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The consequences of using different epoch lengths on the classification of accelerometer based sedentary behaviour and physical activity PONE-D-20-40338R1 Dear Dr. Altenburg, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Kathryn L. Weston, PhD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: (No Response) Reviewer #2: Partly ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: (No Response) Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: (No Response) Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: (No Response) Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I thank the authors for proving acceptable answers to my comments and making appropriate revisions to their manuscript. I have no further comments. Reviewer #2: Dear authors Although I find your responses to my comments reasonable, I still do not agree with your conclusions that 60s epochs are preferable for SED and shorter epochs for MPA or VPA. If the activity is pre-decided and the data processing is set to match that precondition, of course the classification accuracy increases, even if the true activity is not captured. However, this is probably more of a limitation in the traditional accelerometer methodology and with newer methodology we need to calibrate new accelerometer settings in order to classify activities more correct. Therefore, it is very important to be critical to the measurement errors caused by old methodology and not contribute to their maintenance, but instead promote improvements. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Eivind Aadland Reviewer #2: No |
| Formally Accepted |
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PONE-D-20-40338R1 The consequences of using different epoch lengths on the classification of accelerometer based sedentary behaviour and physical activity Dear Dr. Altenburg: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Kathryn L. Weston Academic Editor PLOS ONE |
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