Peer Review History
| Original SubmissionDecember 3, 2020 |
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PONE-D-20-38036 Biomechanical gait characteristics of straight line walk in clinically sound dairy cows PLOS ONE Dear Dr. Tijssen, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Thank you for this well-written manuscript. Both expert reviewers and I found it very interesting. However, the reviewers have identified some areas where the manuscript needs to be improved and I concur with their view. Please carefully address all the reviewers' comments when/if revising your manuscript. Please submit your revised manuscript by Apr 11 2021 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Angel Abuelo, DVM, MRes, MSc, PhD, DABVP (Dairy), DECBHM Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match. When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section. 3. We note you have included a table to which you do not refer in the text of your manuscript. Please ensure that you refer to Table 2 in your text; if accepted, production will need this reference to link the reader to the Table. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: I Don't Know ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Dear authors, With great interest I have read your manuscript and below you will find my comments. The article describes a methodology to assess the locomotion of cows. IMU’s attached to eleven anatomical landmarks were used to show their motion and orientation paths relative to gravitational force (angle) during steps and strides of cows at walk. Up front these cows were checked for their locomotory health and during the experiment guided in forward walking in a straight line at voluntary speed. It is assumed the IMU’s accurately describe the motion of the underlying structure of the musculoskeletal system. The aims are 1) to provide a “biomechanical description of sound walking”, to later allow for anomaly detection that might be related to lameness in ruminants, AND 2) find the best anatomical location using IMU’s for lameness detection. The authors provide an overwhelming amount of figures, curves, table, etc. in which is shown the intra- and intercow variation in sound walking is significant. Luckily the normalization of strides and steps data can be decently done using the describes statistics. Hence, sensor output of the IMU’s can be used for gait analysis. However, an underlying “biomechanical model” is lacking. Front- and hindlimb anatomy and their subsequent functioning in walking, when propelling the animal forward, is different. The, in my opinion oversimplification of, protraction and retraction limb angles measured by the 4 IMU’s attached to the metatarsus and metacarpus, is neglecting the intralimb coordination to be able to describe full-limb biomechanics. The spatial characteristics of these two particular body segments should be better explained and preferably validated in such a model. The temporal aspects of limbs’ stance and swing phases at walk can be recorded, but the authors fail to provide a validation, except for the citations that it works in horses. But from a hooved animal to a cloven-hooved animal this might need additional work, in the light of a lift-off or push-off. Not to forget lameness origin is mainly located at lateral hind claws (possibly resulting in more sickle-hocked walking, hence sagittal plane analysis might not be sufficient). Nothing as such is discussed. Despite the symmetry of motion and orientation paths in the cows’ steps, strides and mentioned support phases shows promise to describe “normal” locomotion patterns, bottom line is; the manuscript is about a sensor technology that measures data, which is shown in all kinds of descriptions, visualizations (average pathways, etc) and heavy statistics, but only assuming a relation with walking. There is no test of showing part of the data falls within the MAD’s of the other part (train and testset-approach) nor a validation using an (gold) standard technology (e.g. Qualisys system). That leaves me as reader with the opinion what I already knew; IMU’s can be used for symmetry assessment in gait analysis (first aim). In addition the second aim, best anatomical landmark for lameness detection is not specifically addressed in the discussion nor conclusion. So I encourage you to provide a better context and reconsider what specific research questions that can be addressed using this dataset. In addition I would like to read a more in-depth discussion. Major concerns The introduction builds a clear case from clinical perspective it is a logical continuation of research to start using IMU’s for lameness detection. However, there is a huge development going on in machine vision and deep learning approaches for lameness detection in cattle (and horses), which in theory could do similar analysis, but then without the hassle of mounting sensors on animals. Neglecting this part of the scientific domain in the introduction seems inappropriate. I suggest the authors provide clear reasoning why their approach is worthwhile pursuing, relative to artificial intelligence, AND the differences between the clinical practice of horses and cows. I can imagine the technology is preferred for its quality, but options for cows in a dairy practice seems very limited. Line 339: “80 versus 60 degrees”. So what is the case? Because with equal limb length, a wider angle (Range of Motion), simply means increased step lengths. That's obviously NOT the case, as all limbs have similar step-lengths. Due to the lack of an animal model there is no clear explanation. The only way to explain, the difference is in the metatarsus/-carpus orientation and motions relative to the adjacent segments in the corresponding limbs. Since these have not been recorded, it is inappropriate to claim more than "the technology is able to detect deviations in symmetry" with respect to the pathway and orientation of the metatarsus/carpus and subsequent bi-, tripedal support phases. Line 474-475: I assume you’ve deliberately choose not to use a force plate. Why was this not possible? The video that was synchronized with one of the IMU’s could be useful in this. Conclusion is too much a continuation of the discussion. Please only mention the conclusions that can be derived form your results. Minor comments: Line 96-97: claws were trimmed 1 to 90 days prior to the experiment, can you be more specific? Line 111; “Sensors attached to skin”, nothing is discussed about skin displacement relative to the musculoskeletal system and potential motion artifacts. Line 124: “calibrated”, seems more like the sensor was tared for midstance, relative to the gravitational force (angle = 0˚). Line 132: “corridor of 72 meter”, no beams, fences or cubicles next to it? Line 134-136: This seems in conflict, self-chosen pace versus "encouraging", that might have caused some head turns at least. Any effect on withers, neck and head sensors? Line 144-157: I might not understand the process, but I prefer to read this in a (chrono)logical order. primary selection: 1) video observation; straight line 2) Physical handling? Not clear what is meant with this. Data processing => footfall, basically the metatarsus/carpus pathway's. final selection: 3) checked for regularity, at least four strides (and not necessarily adjacent to one another?). I suggest to create a flowchart that shows the data selection process till the analysis, to clarify things. Line 159: “the selected IMU data” this is all data or only the selected strides? Line 161-169; A brief explanation of stride segmentation would be useful. In addition, to what extent is an orthogonal projection (to the sagittal plane) an allowed simplification? Line 183-185; it is not clear what amount of limbs (pairs) was used. Suggest to make this clear. Line 185: “bootstrapping” is a 17 cows sample good enough to estimate the extremes of the populations distribution? The process could be better described. Line 227-228: What caused the unequal number of strides? Was the sensor not recording a claw-on or claw-off? It’s clear that it was observed, but authors should provide a (potential) reason for this. Line 437-439: If something is/seems more appropriate, then why is this not used? Line 454: “and is discussed”, interesting to know the opinion of the authors. Reviewer #2: Please find my comments enclosed to the manuscript PONE-D-20-38036, entitled: Biomechanical gait characteristics of straight line walk in clinically sound dairy cows. The authors provided interested data. However, some Revision are needed before publishing. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: PPJ (Rik) van der Tol Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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PONE-D-20-38036R1 Kinematic gait characteristics of straight line walk in clinically sound dairy cows PLOS ONE Dear Dr. Tijssen, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please address the comments of both reviewers through these minor revisions. I concur with the reviewers that some of the aspects explained in the rebuttal letter had not been translated into the body of the revised manuscript. Please submit your revised manuscript by Jul 10 2021 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Angel Abuelo, DVM, MRes, MSc, PhD, DABVP (Dairy), DECBHM Academic Editor PLOS ONE Journal Requirements: Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: N/A Reviewer #2: I Don't Know ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Dear authors, First my apologies for my late review, some circumstances made me have to go off grid for a few weeks. Nevertheless, below follows my (few) remaining comments. Second, thank you for addressing my previous comments. You did a great job providing me with detailed answers to my questions and concerns, which clarified for me most things. And I appreciate that “biomechanics” were toned down to “kinematic”, which is more to the point concerning the IMU’s. However, some of the clarifications from the rebuttal letter were not included in your manuscript. And this (type of discussion) is exactly what I think is lacking and potentially lifts up the manuscript’s value for the readership of the journal. Not to forget about the fact that many people from the dairy domain are unfamiliar with the horse kinematic studies using IMU technology or kinematics in general. Three points: 1) The change from “limb angle” to “distal limb angle” is a step in the right direction, however I think you could provide a good kinematic definition of what is exactly meant by this in the M&M section. Hence explain the relevance of the specific body segment’s angle and orientation (metatarsus and metacarpus) in the step cycle of the particular limb AND why it is useful to obtain this information. It could be added to the discussion from the perspective of the “clinical gait evaluation” in which multiple IMU could be used, opposed to the “farm setting” where a single IMU is mounted to one of the legs lameness screening, as you state to be the best location. However, single sided IMU’s make it more difficult to show asymmetry, hence a position in the neck might show the best trade-off, or not? 2) Whether it is the clinical or the farm setting, it cannot be neglected in the discussion that machine vision technologies are rapidly evolving to a situation which is easily compared with your technology. And, it is my personal opinion we need your type of studies to be able to explain/verify these new approaches, and vice versa. In addition, it is strange to me to read this opinion in the last line of your manuscript, without it being properly discussed. 3) If no more interpretation/aggregation of data is provided, basically it is left to the reader, then in general there are too many (vertical) displacement figures in my opinion. a. One figure of all cows with one of the IMU’s is sufficient to show interindividual variations that is similar for all sensors. b. One cow’s all IMU’s to show the paths of various locations is enough to show the difference between locations. Minor: Line 75 kinetic => kinematic Other than that, no further comments. Reviewer #2: Thank you for this. The authors adressed all my comments. see my previous comment (72-73: how the authors can explain the importance of applying the sensors in upper body in comparison to the "traditional" limb positions?) I suggest to add your your explanation to the text accordingly. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: P.P.J. van der Tol Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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Kinematic gait characteristics of straight line walk in clinically sound dairy cows PONE-D-20-38036R2 Dear Dr. Tijssen, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Angel Abuelo, DVM, MRes, MSc, PhD, DABVP (Dairy), DECBHM Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-20-38036R2 Kinematic gait characteristics of straight line walk in clinically sound dairy cows Dear Dr. Tijssen: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Angel Abuelo Academic Editor PLOS ONE |
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