Peer Review History
| Original SubmissionNovember 20, 2020 |
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PONE-D-20-36603 Parasites and RNA viruses in wild and laboratory reared bumblebees Bombus pauloensis (Hymenoptera: Apidae) from Uruguay PLOS ONE Dear Dr. Salvarrey, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Feb 28 2021 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No Reviewer #2: No ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Given the topic and type of this paper, the data and analyses done are sufficient, but overall I miss objectives which make this paper relevant and worthwhile. I decided to put 'minor revisions' because the objectives, although they are very minimal, are achieved. But i do strongly suggest to read my comments and answer some questions, and I hope that they will be helpful. The heterogeneity of the types of pathogens screened for is good, but I do miss some additional analysis. For example, the choice of only microscopic screening of internal pathogens does not make the methods very sensitive. Only two microsporidian species were chosen to screen for. Why the choice of these parasites? Why not other internal parasites like Crithidia sp. or Apicystis sp.? This might give a lot more interpretable data, and might give enough parasite diversity data to actually state some objectives and get some more information regarding parasites in bumblebees, rather than only report the findings. I also wonder how did you distinguish between Nosema species? How did you see a difference between N. ceranae and N. bombi without molecular confirmation? For me the sampling set up is not very clear: why take queens from wild and rear them, and then compare them with workers from the wild but from another year? What was the original motive to do this, [199] having a similar prevalence between queens and laboratory workers is not so strange, since they don’t come into contact anymore with the environment, the lab workers can only get parasites from the queens; the queens already infested will transmit their parasites, while the queens not infested cannot transmit parasites, so the prevalence will stay similar. What would be a relevant analysis, is to compare the parasite diversity between the queens and the lab workers; are there any parasites that are not present (or way less) in the lab workers but were omnipresent in the queens? For example from your data, there doesn’t seem to be a bottle neck for Nosema ceranae, but a small bottleneck for T. pampeana. Even better would be to also analyse the parasites of the queens used for rearing, if they were kept frozen after the experiment. [255] You mention mites being a possible vector, but you don’t analyse this in your data; for this you don’t necessarily have to screen the mites themselves, but you could model a relation between presence of certain mite species and prevalence/abundance/load of viruses and pathogens. Some smaller comments: The general structure is not good yet. Some examples: 55 strange sentence ‘another example of pathogen spillover are RNA viruses’. Then you explain how viruses found in honeybees are also found in other bee species, but you don’t provide any context about why these viruses are considered to be a spillover risk. 45 ‘among others’ fits better than ‘between others’. Also, maybe it is good to mention multiplicative effects, like pesticide intoxication that increases pathogen susceptibility. 85-87 I do not understand this sentence. This sentence seems to state that B. terrestris and .B ruderatus is present in Uruguay, while on line 72 you say there are only B. pauloensis and B. bellicosus. Also the second part of the sentence on 86 does not make sense. 94 you mention 33 queens, and then explain how many are used for different analysis; then you mention 40 (of these 33??) were used to start laboratory rearing. I don’t think that is physically possible… Also were the queens collected from a lab experiment or were they actually caught during foraging from the wild? This is not explained clearly. There are still a lot of grammar and spelling mistakes in the text. Some examples: 84 ‘significant’ damage 107 grammatical mistake 287-289 strange sentence 327 spotted 392 strange sentence 397 strange sentence and weird conclusion? Reviewer #2: The authors did not make all data available. There were not Supporting Information or Supplementary Material. The English language is ok. However, there were shown typographical/grammatical errors (minimum). I am not English language specialist; therefore, I can not question the writing of the manuscript. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Tina Tuerlings Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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Parasites and RNA viruses in wild and laboratory reared bumblebees <bombus pauloensis=""> (Hymenoptera: Apidae) from Uruguay PONE-D-20-36603R1</bombus> Dear Dr. Salvarrey, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Guy Smagghe, PhD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Tina Tuerlings |
| Formally Accepted |
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PONE-D-20-36603R1 Parasites and RNA viruses in wild and laboratory reared bumble bees Bombus pauloensis (Hymenoptera: Apidae) from Uruguay Dear Dr. Salvarrey: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Prof. Guy Smagghe Academic Editor PLOS ONE |
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